RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 IFNEQ86WN2 208 aa12.4□□□□□ -0.42
SAMM50-204ENST00000493161 GRAMD2AQ8IUY3 354 aa12.4□□□□□ -0.42
SAMM50-204ENST00000493161 OR52B6Q8NGF0 335 aa12.4□□□□□ -0.42
SAMM50-204ENST00000493161 PIGTQ969N2 578 aa12.4□□□□□ -0.42
SAMM50-204ENST00000493161 REPS1Q96D71 796 aa12.4□□□□□ -0.42
SAMM50-204ENST00000493161 LCORQ96JN0 433 aaPredicted RBP12.4□□□□□ -0.42
SAMM50-204ENST00000493161 MARK4Q96L34 752 aa12.4□□□□□ -0.42
SAMM50-204ENST00000493161 CCL19Q99731 98 aa12.4□□□□□ -0.42
SAMM50-204ENST00000493161 OPN3Q9H1Y3 402 aaPredicted RBP12.4□□□□□ -0.42
SAMM50-204ENST00000493161 ANKRA2Q9H9E1 313 aa12.4□□□□□ -0.42
SAMM50-204ENST00000493161 PSD3Q9NYI0 1048 aa12.4□□□□□ -0.42
SAMM50-204ENST00000493161 ZNF639Q9UID6 485 aa12.4□□□□□ -0.42
SAMM50-204ENST00000493161 PLLPQ9Y342 182 aa12.4□□□□□ -0.42
SAMM50-204ENST00000493161 HMX2A2RU54 273 aa12.39□□□□□ -0.43
SAMM50-204ENST00000493161 HCRTR2O43614 444 aa12.39□□□□□ -0.43
SAMM50-204ENST00000493161 ZIC3O60481 467 aa12.39□□□□□ -0.43
SAMM50-204ENST00000493161 UGDHO60701 494 aa12.39□□□□□ -0.43
SAMM50-204ENST00000493161 CDH16O75309 829 aa12.39□□□□□ -0.43
SAMM50-204ENST00000493161 ERAL1O75616 437 aaKnown RBP12.39□□□□□ -0.43
SAMM50-204ENST00000493161 LOXP28300 417 aaPredicted RBP12.39□□□□□ -0.43
SAMM50-204ENST00000493161 CRABP2P29373 138 aa12.39□□□□□ -0.43
SAMM50-204ENST00000493161 MC3RP41968 323 aa12.39□□□□□ -0.43
SAMM50-204ENST00000493161 EMDP50402 254 aa12.39□□□□□ -0.43
SAMM50-204ENST00000493161 ALDH18A1P54886 795 aaKnown RBP12.39□□□□□ -0.43
SAMM50-204ENST00000493161 HMGCS1Q01581 520 aa12.39□□□□□ -0.43
SAMM50-204ENST00000493161 MAP4K2Q12851 820 aa12.39□□□□□ -0.43
SAMM50-204ENST00000493161 SNTA1Q13424 505 aa12.39□□□□□ -0.43
SAMM50-204ENST00000493161 CCNYL2Q5T2Q4 361 aa12.39□□□□□ -0.43
SAMM50-204ENST00000493161 C6orf163Q5TEZ5 329 aa12.39□□□□□ -0.43
SAMM50-204ENST00000493161 SLC48A1Q6P1K1 146 aa12.39□□□□□ -0.43
SAMM50-204ENST00000493161 PRSS57Q6UWY2 283 aa12.39□□□□□ -0.43
SAMM50-204ENST00000493161 CXXC5Q7LFL8 322 aaKnown RBP12.39□□□□□ -0.43
SAMM50-204ENST00000493161 ZNF550Q7Z398 422 aa12.39□□□□□ -0.43
SAMM50-204ENST00000493161 PLCZ1Q86YW0 608 aa12.39□□□□□ -0.43
SAMM50-204ENST00000493161 CNEP1R1Q8N9A8 125 aa12.39□□□□□ -0.43
SAMM50-204ENST00000493161 OR52R1Q8NGF1 315 aa12.39□□□□□ -0.43
SAMM50-204ENST00000493161 RHEBL1Q8TAI7 183 aa12.39□□□□□ -0.43
SAMM50-204ENST00000493161 TMBIM1Q969X1 311 aa12.39□□□□□ -0.43
SAMM50-204ENST00000493161 GPR78Q96P69 363 aa12.39□□□□□ -0.43
SAMM50-204ENST00000493161 FAM111AQ96PZ2 611 aa12.39□□□□□ -0.43
SAMM50-204ENST00000493161 SERPINI1Q99574 410 aa12.39□□□□□ -0.43
SAMM50-204ENST00000493161 BDH2Q9BUT1 245 aa12.39□□□□□ -0.43
SAMM50-204ENST00000493161 NOL11Q9H8H0 719 aaKnown RBP12.39□□□□□ -0.43
SAMM50-204ENST00000493161 GRHL1Q9NZI5 618 aa12.39□□□□□ -0.43
SAMM50-204ENST00000493161 TRPS1Q9UHF7 1281 aa12.39□□□□□ -0.43
SAMM50-204ENST00000493161 ACOT9Q9Y305 439 aa12.39□□□□□ -0.43
SAMM50-204ENST00000493161 PCDHA9Q9Y5H5 950 aa12.39□□□□□ -0.43
SAMM50-204ENST00000493161 SYCE1LA8MT33 242 aa12.38□□□□□ -0.43
SAMM50-204ENST00000493161 H0YC42 278 aa12.38□□□□□ -0.43
SAMM50-204ENST00000493161 MSTNO14793 375 aa12.38□□□□□ -0.43
SAMM50-204ENST00000493161 SEMA3DO95025 777 aa12.38□□□□□ -0.43
SAMM50-204ENST00000493161 CLDN9O95484 217 aa12.38□□□□□ -0.43
SAMM50-204ENST00000493161 ATP1B1P05026 303 aa12.38□□□□□ -0.43
SAMM50-204ENST00000493161 C2P06681 752 aa12.38□□□□□ -0.43
SAMM50-204ENST00000493161 PCSK2P16519 638 aa12.38□□□□□ -0.43
SAMM50-204ENST00000493161 CRYGSP22914 178 aa12.38□□□□□ -0.43
SAMM50-204ENST00000493161 CHMP24386 653 aa12.38□□□□□ -0.43
SAMM50-204ENST00000493161 SRD5A2P31213 254 aa12.38□□□□□ -0.43
SAMM50-204ENST00000493161 UGT2B10P36537 528 aa12.38□□□□□ -0.43
SAMM50-204ENST00000493161 CD79BP40259 229 aa12.38□□□□□ -0.43
SAMM50-204ENST00000493161 KIR2DL2P43627 348 aaPredicted RBP12.38□□□□□ -0.43
SAMM50-204ENST00000493161 TPD52P55327 224 aaPredicted RBP12.38□□□□□ -0.43
SAMM50-204ENST00000493161 CLDN15P56746 228 aa12.38□□□□□ -0.43
SAMM50-204ENST00000493161 B3GALT5-AS1P59052 145 aa12.38□□□□□ -0.43
SAMM50-204ENST00000493161 MRPS35P82673 323 aaKnown RBP12.38□□□□□ -0.43
SAMM50-204ENST00000493161 SGO1Q5FBB7 561 aa12.38□□□□□ -0.43
SAMM50-204ENST00000493161 FBF1Q8TES7 1133 aa12.38□□□□□ -0.43
SAMM50-204ENST00000493161 FIG4Q92562 907 aa12.38□□□□□ -0.43
SAMM50-204ENST00000493161 ZC3HAV1LQ96H79 300 aaKnown RBP12.38□□□□□ -0.43
SAMM50-204ENST00000493161 SFXN2Q96NB2 322 aa12.38□□□□□ -0.43
SAMM50-204ENST00000493161 NSUN5Q96P11 429 aaKnown RBP12.38□□□□□ -0.43
SAMM50-204ENST00000493161 MED18Q9BUE0 208 aa12.38□□□□□ -0.43
SAMM50-204ENST00000493161 REPIN1Q9BWE0 567 aaKnown RBP12.38□□□□□ -0.43
SAMM50-204ENST00000493161 ACBD3Q9H3P7 528 aa12.38□□□□□ -0.43
SAMM50-204ENST00000493161 FARSBQ9NSD9 589 aaKnown RBP12.38□□□□□ -0.43
SAMM50-204ENST00000493161 CPSF2Q9P2I0 782 aaKnown RBP12.38□□□□□ -0.43
SAMM50-204ENST00000493161 ARID1AO14497 2285 aa12.37□□□□□ -0.43
SAMM50-204ENST00000493161 RAI1Q7Z5J4 1906 aaPredicted RBP12.37□□□□□ -0.43
SAMM50-204ENST00000493161 TLN2Q9Y4G6 2542 aa12.37□□□□□ -0.43
SAMM50-204ENST00000493161 CCDC188H7C350 402 aa12.37□□□□□ -0.43
SAMM50-204ENST00000493161 ACOX3O15254 700 aa12.37□□□□□ -0.43
SAMM50-204ENST00000493161 EIF3HO15372 352 aaKnown RBP eCLIP12.37□□□□□ -0.43
SAMM50-204ENST00000493161 ZSCAN12O43309 604 aa12.37□□□□□ -0.43
SAMM50-204ENST00000493161 REM1O75628 298 aa12.37□□□□□ -0.43
SAMM50-204ENST00000493161 CNOT4O95628 575 aaKnown RBP12.37□□□□□ -0.43
SAMM50-204ENST00000493161 CGAP01215 116 aa12.37□□□□□ -0.43
SAMM50-204ENST00000493161 CTAGE8P0CG41 777 aa12.37□□□□□ -0.43
SAMM50-204ENST00000493161 NID1P14543 1247 aa12.37□□□□□ -0.43
SAMM50-204ENST00000493161 FPR1P21462 350 aa12.37□□□□□ -0.43
SAMM50-204ENST00000493161 DRD5P21918 477 aa12.37□□□□□ -0.43
SAMM50-204ENST00000493161 ARL1P40616 181 aaPredicted RBP12.37□□□□□ -0.43
SAMM50-204ENST00000493161 PPICP45877 212 aa12.37□□□□□ -0.43
SAMM50-204ENST00000493161 MAPK12P53778 367 aa12.37□□□□□ -0.43
SAMM50-204ENST00000493161 CORO7P57737 925 aa12.37□□□□□ -0.43
SAMM50-204ENST00000493161 SIRPAP78324 504 aa12.37□□□□□ -0.43
SAMM50-204ENST00000493161 GALNT1Q10472 559 aaPredicted RBP12.37□□□□□ -0.43
SAMM50-204ENST00000493161 MROH9Q5TGP6 573 aa12.37□□□□□ -0.43
SAMM50-204ENST00000493161 FRG2Q64ET8 278 aa12.37□□□□□ -0.43
SAMM50-204ENST00000493161 ANKRD34AQ69YU3 496 aa12.37□□□□□ -0.43
SAMM50-204ENST00000493161 AAGABQ6PD74 315 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms