RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 ZCCHC9Q8N567 271 aaKnown RBP3.95□□□□□ -1.78
BRCA1-220ENST00000492859 C12orf76Q8N812 135 aaPredicted RBP3.95□□□□□ -1.78
BRCA1-220ENST00000492859 CNBD1Q8NA66 436 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 OR11L1Q8NGX0 322 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 OR2L2Q8NH16 312 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 OR4A16Q8NH70 328 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 MAFAQ8NHW3 353 aaPredicted RBP3.95□□□□□ -1.78
BRCA1-220ENST00000492859 FAR1Q8WVX9 515 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 ASB11Q8WXH4 323 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 ALG3Q92685 438 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 SMARCD2Q92925 531 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 GLYATL1Q969I3 302 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 TMBIM1Q969X1 311 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 SLC35C1Q96A29 364 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 KREMEN1Q96MU8 473 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 SERPINB11Q96P15 392 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 QKIQ96PU8 341 aaKnown RBP eCLIP3.95□□□□□ -1.78
BRCA1-220ENST00000492859 SLC38A2Q96QD8 506 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 SEPT5Q99719 369 aaPredicted RBP3.95□□□□□ -1.78
BRCA1-220ENST00000492859 MAP3K3Q99759 626 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 MCRIP2Q9BUT9 160 aaKnown RBP3.95□□□□□ -1.78
BRCA1-220ENST00000492859 KIFC1Q9BW19 673 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 ERVK-6Q9BXR3 956 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 ACTRT3Q9BYD9 372 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 CSTL1Q9H114 145 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 NARFLQ9H6Q4 476 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 DDX31Q9H8H2 851 aaKnown RBP3.95□□□□□ -1.78
BRCA1-220ENST00000492859 UBTD1Q9HAC8 227 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 SIRT7Q9NRC8 400 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 NECAP2Q9NVZ3 263 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 CCDC59Q9P031 241 aaKnown RBP3.95□□□□□ -1.78
BRCA1-220ENST00000492859 NXT1Q9UKK6 140 aaKnown RBP3.95□□□□□ -1.78
BRCA1-220ENST00000492859 ZDHHC8Q9ULC8 765 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 NFU1Q9UMS0 254 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 TP53TG5Q9Y2B4 290 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 HCFC2Q9Y5Z7 792 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 ACTL7AQ9Y615 435 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 WNT6Q9Y6F9 365 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 DISP3Q9P2K9 1392 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 RIMS1Q86UR5 1692 aaKnown RBP3.94□□□□□ -1.78
BRCA1-220ENST00000492859 SMCO3A2RU48 225 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 FAM90A27PA6NNH2 459 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 KPNA3O00505 521 aaPredicted RBP3.94□□□□□ -1.78
BRCA1-220ENST00000492859 PDXKO00764 312 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 GOSR2O14653 212 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 SLC22A2O15244 555 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 NBR2O15453 112 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 CHP2O43745 196 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 RAMP3O60896 148 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 ENTPD5O75356 428 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 SH3BGRLO75368 114 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 VAPBO95292 243 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 ANGPTL1O95841 491 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 MOCS2O96007 188 aaPredicted RBP3.94□□□□□ -1.78
BRCA1-220ENST00000492859 SERPINA1P01009 418 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 CD1AP06126 327 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 PROS1P07225 676 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 GRPP07492 148 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 CTSBP07858 339 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 MMP10P09238 476 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 RBP1P09455 135 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 RAB40ALP0C0E4 278 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 FAM157BP0CG42 384 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 FCGR1AP12314 374 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 CPN1P15169 458 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 CYP11B1P15538 503 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 RAB3AP20336 220 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 EFNA1P20827 205 aaPredicted RBP3.94□□□□□ -1.78
BRCA1-220ENST00000492859 CALCRP30988 508 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 VAV2P52735 878 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 BLOC1S1P78537 153 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 SSBP2P81877 361 aaPredicted RBP3.94□□□□□ -1.78
BRCA1-220ENST00000492859 E2F1Q01094 437 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 ACSM2AQ08AH3 577 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 NFATC3Q12968 1075 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 SLBPQ14493 270 aaKnown RBP eCLIP3.94□□□□□ -1.78
BRCA1-220ENST00000492859 TRIP13Q15645 432 aaPredicted RBP3.94□□□□□ -1.78
BRCA1-220ENST00000492859 HLFQ16534 295 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 NDUFA9Q16795 377 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 DEFB115Q30KQ5 88 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 WASHC2DQ5SRD0 308 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 TMEM63BQ5T3F8 832 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 DCAF12L2Q5VW00 463 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 ACSM2BQ68CK6 577 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 SLC8B1Q6J4K2 584 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 FAHD2BQ6P2I3 314 aaPredicted RBP3.94□□□□□ -1.78
BRCA1-220ENST00000492859 KCNIP4Q6PIL6 250 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 FIGNL1Q6PIW4 674 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 PRSS55Q6UWB4 352 aaPredicted RBP3.94□□□□□ -1.78
BRCA1-220ENST00000492859 FAM159AQ6UWV7 190 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 BTNL3Q6UXE8 466 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 DEF8Q6ZN54 512 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 C8orf86Q6ZUL3 223 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 BMP8AQ7Z5Y6 402 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 CALHM1Q8IU99 346 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 CRLF3Q8IUI8 442 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 LACC1Q8IV20 430 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 CMTM8Q8IZV2 173 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 C1orf87Q8N0U7 546 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 TMEM123Q8N131 208 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms