RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 LRRC3CA6NJW4 275 aa15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 TO15178 435 aa15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 SEC22BO75396 215 aa15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 LRATO95237 230 aa15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 ACTL6AO96019 429 aa15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 CLPSP04118 112 aa15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 HPNP05981 417 aa15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 RFPL3SP0C7P2 107 aa15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 PCSK2P16519 638 aa15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 S1PR1P21453 382 aa15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 MYBPHQ13203 477 aa15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 NNATQ16517 81 aa15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 TCHHL1Q5QJ38 904 aaPredicted RBP15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 TMEM81Q6P7N7 255 aa15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 ANGPTL8Q6UXH0 198 aa15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 IKBIPQ70UQ0 350 aa15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 WDR53Q7Z5U6 358 aaPredicted RBP15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 LACC1Q8IV20 430 aa15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 ULK2Q8IYT8 1036 aa15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 BANPQ8N9N5 519 aa15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 OR14L1PQ8NHC6 308 aa15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 CTHRC1Q96CG8 243 aa15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 LURAP1Q96LR2 239 aa15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 GNRHR2Q96P88 292 aa15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 PARD6BQ9BYG5 372 aa15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 SLC6A15Q9H2J7 730 aa15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 C3orf14Q9HBI5 128 aa15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 MCCC2Q9HCC0 563 aa15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 KCNN3Q9UGI6 736 aa15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 ZNF639Q9UID6 485 aa15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 HRH3Q9Y5N1 445 aa15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 UTP20O75691 2785 aaKnown RBP15.17■□□□□ 0.02
PDLIM2-217ENST00000491330 A0A1W2PS29 197 aa15.16■□□□□ 0.02
PDLIM2-217ENST00000491330 NKX2-6A6NCS4 301 aa15.16■□□□□ 0.02
PDLIM2-217ENST00000491330 PRAMEF25A6NGN4 478 aa15.16■□□□□ 0.02
PDLIM2-217ENST00000491330 OR6C70A6NIJ9 312 aa15.16■□□□□ 0.02
PDLIM2-217ENST00000491330 TTC36A6NLP5 189 aa15.16■□□□□ 0.02
PDLIM2-217ENST00000491330 NPIPB8E9PQR5 432 aa15.16■□□□□ 0.02
PDLIM2-217ENST00000491330 C19orf84I3L1E1 186 aa15.16■□□□□ 0.02
PDLIM2-217ENST00000491330 GNB5O14775 395 aa15.16■□□□□ 0.02
PDLIM2-217ENST00000491330 PLOD3O60568 738 aa15.16■□□□□ 0.02
PDLIM2-217ENST00000491330 TRIM13O60858 407 aa15.16■□□□□ 0.02
PDLIM2-217ENST00000491330 ERN1O75460 977 aaKnown RBP15.16■□□□□ 0.02
PDLIM2-217ENST00000491330 RSL1D1O76021 490 aaKnown RBP15.16■□□□□ 0.02
PDLIM2-217ENST00000491330 EPPINO95925 133 aa15.16■□□□□ 0.02
PDLIM2-217ENST00000491330 NEFHP12036 1026 aa15.16■□□□□ 0.02
PDLIM2-217ENST00000491330 NCBP2P52298 156 aaKnown RBP eCLIP15.16■□□□□ 0.02
PDLIM2-217ENST00000491330 AAGABQ6PD74 315 aa15.16■□□□□ 0.02
PDLIM2-217ENST00000491330 CHMP1BQ7LBR1 199 aa15.16■□□□□ 0.02
PDLIM2-217ENST00000491330 MARVELD2Q8N4S9 558 aa15.16■□□□□ 0.02
PDLIM2-217ENST00000491330 ZFP28Q8NHY6 868 aa15.16■□□□□ 0.02
PDLIM2-217ENST00000491330 ABTB1Q969K4 478 aaPredicted RBP15.16■□□□□ 0.02
PDLIM2-217ENST00000491330 APIPQ96GX9 242 aa15.16■□□□□ 0.02
PDLIM2-217ENST00000491330 ZNF681Q96N22 645 aa15.16■□□□□ 0.02
PDLIM2-217ENST00000491330 EBPLQ9BY08 206 aa15.16■□□□□ 0.02
PDLIM2-217ENST00000491330 TRIM8Q9BZR9 551 aa15.16■□□□□ 0.02
PDLIM2-217ENST00000491330 UCK2Q9BZX2 261 aa15.16■□□□□ 0.02
PDLIM2-217ENST00000491330 SSU72Q9NP77 194 aaKnown RBP15.16■□□□□ 0.02
PDLIM2-217ENST00000491330 TNFRSF10DQ9UBN6 386 aa15.16■□□□□ 0.02
PDLIM2-217ENST00000491330 FOXD3Q9UJU5 478 aaPredicted RBP15.16■□□□□ 0.02
PDLIM2-217ENST00000491330 CAMK2AQ9UQM7 478 aa15.16■□□□□ 0.02
PDLIM2-217ENST00000491330 CREBBPQ92793 2442 aa15.16■□□□□ 0.02
PDLIM2-217ENST00000491330 ICOSLGO75144 302 aa15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 TOXO94900 526 aa15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 SNUPNO95149 360 aaKnown RBP15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 ZWINTO95229 277 aa15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 CBX7O95931 251 aa15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 CYP4B1P13584 511 aa15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 CHN1P15882 459 aa15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 MSX1P28360 303 aa15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 EEF1A1P68104 462 aaKnown RBP15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 MRPS35P82673 323 aaKnown RBP15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 MGAT2Q10469 447 aa15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 VPS26BQ4G0F5 336 aa15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 ZNF628Q5EBL2 1059 aa15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 EEF1A1P5Q5VTE0 462 aa15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 LARP4Q71RC2 724 aaKnown RBP eCLIP15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 TRIM46Q7Z4K8 759 aa15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 KIRREL3Q8IZU9 778 aa15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 C4orf33Q8N1A6 199 aa15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 OR9A2Q8NGT5 310 aa15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 KAT2AQ92830 837 aa15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 TMBIM1Q969X1 311 aa15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 PKNOX2Q96KN3 472 aa15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 TIMP4Q99727 224 aa15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 PROK2Q9HC23 129 aa15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 Q9N2J8 555 aa15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 DDX18Q9NVP1 670 aaKnown RBP15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 SPRR3Q9UBC9 169 aa15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 HEY2Q9UBP5 337 aa15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 EXO1Q9UQ84 846 aaKnown RBP15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 GPR55Q9Y2T6 319 aaPredicted RBP15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 FAM215AQ9Y5M1 114 aa15.15■□□□□ 0.02
PDLIM2-217ENST00000491330 CACNA1DQ01668 2161 aa15.14■□□□□ 0.01
PDLIM2-217ENST00000491330 SNPHO15079 494 aa15.14■□□□□ 0.01
PDLIM2-217ENST00000491330 NPHS1O60500 1241 aa15.14■□□□□ 0.01
PDLIM2-217ENST00000491330 ERLIN1O75477 346 aa15.14■□□□□ 0.01
PDLIM2-217ENST00000491330 PRPH2P23942 346 aa15.14■□□□□ 0.01
PDLIM2-217ENST00000491330 GPC1P35052 558 aa15.14■□□□□ 0.01
PDLIM2-217ENST00000491330 TIMP3P35625 211 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms