RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 SLC30A6Q6NXT4 461 aa15.99■□□□□ 0.15
SEC13-218ENST00000490283 MCEMP1Q8IX19 187 aa15.99■□□□□ 0.15
SEC13-218ENST00000490283 MARVELD2Q8N4S9 558 aa15.99■□□□□ 0.15
SEC13-218ENST00000490283 OR1J4Q8NGS1 313 aa15.99■□□□□ 0.15
SEC13-218ENST00000490283 TMEM41AQ96HV5 264 aa15.99■□□□□ 0.15
SEC13-218ENST00000490283 OSBPL11Q9BXB4 747 aa15.99■□□□□ 0.15
SEC13-218ENST00000490283 SLC6A15Q9H2J7 730 aa15.99■□□□□ 0.15
SEC13-218ENST00000490283 TNFRSF10DQ9UBN6 386 aa15.99■□□□□ 0.15
SEC13-218ENST00000490283 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.99■□□□□ 0.15
SEC13-218ENST00000490283 GPR55Q9Y2T6 319 aaPredicted RBP15.99■□□□□ 0.15
SEC13-218ENST00000490283 C15orf41Q9Y2V0 281 aa15.99■□□□□ 0.15
SEC13-218ENST00000490283 HRH3Q9Y5N1 445 aa15.99■□□□□ 0.15
SEC13-218ENST00000490283 V9GYY5 206 aaPredicted RBP15.99■□□□□ 0.15
SEC13-218ENST00000490283 NBPF19A0A087WUL8 3843 aa15.99■□□□□ 0.15
SEC13-218ENST00000490283 NPHS1O60500 1241 aa15.98■□□□□ 0.15
SEC13-218ENST00000490283 JUNP05412 331 aaKnown RBP15.98■□□□□ 0.15
SEC13-218ENST00000490283 PRPH2P23942 346 aa15.98■□□□□ 0.15
SEC13-218ENST00000490283 ALDH3A1P30838 453 aa15.98■□□□□ 0.15
SEC13-218ENST00000490283 NUP107P57740 925 aa15.98■□□□□ 0.15
SEC13-218ENST00000490283 MRPS22P82650 360 aaKnown RBP15.98■□□□□ 0.15
SEC13-218ENST00000490283 ZNF155Q12901 538 aaPredicted RBP15.98■□□□□ 0.15
SEC13-218ENST00000490283 EFR3AQ14156 821 aa15.98■□□□□ 0.15
SEC13-218ENST00000490283 C1orf185Q5T7R7 199 aa15.98■□□□□ 0.15
SEC13-218ENST00000490283 TMEM81Q6P7N7 255 aa15.98■□□□□ 0.15
SEC13-218ENST00000490283 GDF7Q7Z4P5 450 aa15.98■□□□□ 0.15
SEC13-218ENST00000490283 DDIASQ8IXT1 998 aa15.98■□□□□ 0.15
SEC13-218ENST00000490283 SIMC1Q8NDZ2 872 aa15.98■□□□□ 0.15
SEC13-218ENST00000490283 TCP10LQ8TDR4 215 aa15.98■□□□□ 0.15
SEC13-218ENST00000490283 TMBIM1Q969X1 311 aa15.98■□□□□ 0.15
SEC13-218ENST00000490283 COL21A1Q96P44 957 aa15.98■□□□□ 0.15
SEC13-218ENST00000490283 BTBD9Q96Q07 612 aa15.98■□□□□ 0.15
SEC13-218ENST00000490283 TNFRSF12AQ9NP84 129 aa15.98■□□□□ 0.15
SEC13-218ENST00000490283 DDX18Q9NVP1 670 aaKnown RBP15.98■□□□□ 0.15
SEC13-218ENST00000490283 SPRR3Q9UBC9 169 aa15.98■□□□□ 0.15
SEC13-218ENST00000490283 RNF6Q9Y252 685 aa15.98■□□□□ 0.15
SEC13-218ENST00000490283 OR10H1Q9Y4A9 318 aa15.98■□□□□ 0.15
SEC13-218ENST00000490283 PCDHGB3Q9Y5G1 929 aa15.98■□□□□ 0.15
SEC13-218ENST00000490283 A0A087WV62 115 aa15.97■□□□□ 0.15
SEC13-218ENST00000490283 PRAMEF25A6NGN4 478 aa15.97■□□□□ 0.15
SEC13-218ENST00000490283 OR6C70A6NIJ9 312 aa15.97■□□□□ 0.15
SEC13-218ENST00000490283 MYO1GB0I1T2 1018 aa15.97■□□□□ 0.15
SEC13-218ENST00000490283 GNB5O14775 395 aa15.97■□□□□ 0.15
SEC13-218ENST00000490283 DDX5P17844 614 aaKnown RBP15.97■□□□□ 0.15
SEC13-218ENST00000490283 SERPINB5P36952 375 aa15.97■□□□□ 0.15
SEC13-218ENST00000490283 CDK9P50750 372 aaKnown RBP15.97■□□□□ 0.15
SEC13-218ENST00000490283 SF3B4Q15427 424 aaKnown RBP eCLIP15.97■□□□□ 0.152e-10■■■■□ 23.6
SEC13-218ENST00000490283 CDSNQ15517 529 aa15.97■□□□□ 0.15
SEC13-218ENST00000490283 TIGD3Q6B0B8 471 aa15.97■□□□□ 0.15
SEC13-218ENST00000490283 ANGPTL8Q6UXH0 198 aa15.97■□□□□ 0.15
SEC13-218ENST00000490283 RNF165Q6ZSG1 346 aa15.97■□□□□ 0.15
SEC13-218ENST00000490283 RPRMLQ8N4K4 120 aa15.97■□□□□ 0.15
SEC13-218ENST00000490283 OR7G2Q8NG99 324 aa15.97■□□□□ 0.15
SEC13-218ENST00000490283 HGDQ93099 445 aa15.97■□□□□ 0.15
SEC13-218ENST00000490283 GNRHR2Q96P88 292 aa15.97■□□□□ 0.15
SEC13-218ENST00000490283 CCT7Q99832 543 aa15.97■□□□□ 0.15
SEC13-218ENST00000490283 TTYH2Q9BSA4 534 aa15.97■□□□□ 0.15
SEC13-218ENST00000490283 ANKRA2Q9H9E1 313 aa15.97■□□□□ 0.15
SEC13-218ENST00000490283 FOLH1BQ9HBA9 442 aa15.97■□□□□ 0.15
SEC13-218ENST00000490283 KCNJ16Q9NPI9 418 aa15.97■□□□□ 0.15
SEC13-218ENST00000490283 TAS2R7Q9NYW3 318 aa15.97■□□□□ 0.15
SEC13-218ENST00000490283 SLC17A7Q9P2U7 560 aa15.97■□□□□ 0.15
SEC13-218ENST00000490283 TMED5Q9Y3A6 229 aa15.97■□□□□ 0.15
SEC13-218ENST00000490283 NCOA6Q14686 2063 aaPredicted RBP15.96■□□□□ 0.15
SEC13-218ENST00000490283 FAM90A27PA6NNH2 459 aa15.96■□□□□ 0.15
SEC13-218ENST00000490283 NPIPB8E9PQR5 432 aa15.96■□□□□ 0.15
SEC13-218ENST00000490283 UGT2B11O75310 529 aa15.96■□□□□ 0.15
SEC13-218ENST00000490283 HPNP05981 417 aa15.96■□□□□ 0.15
SEC13-218ENST00000490283 LINC00032P0C843 101 aa15.96■□□□□ 0.15
SEC13-218ENST00000490283 ENDOUP21128 410 aaKnown RBP15.96■□□□□ 0.15
SEC13-218ENST00000490283 SOX18P35713 384 aa15.96■□□□□ 0.15
SEC13-218ENST00000490283 MC3RP41968 323 aa15.96■□□□□ 0.15
SEC13-218ENST00000490283 RPL38P63173 70 aaKnown RBP15.96■□□□□ 0.15
SEC13-218ENST00000490283 ZNHIT3Q15649 155 aaPredicted RBP15.96■□□□□ 0.15
SEC13-218ENST00000490283 KRT71Q3SY84 523 aa15.96■□□□□ 0.15
SEC13-218ENST00000490283 ARL13AQ5H913 290 aaPredicted RBP15.96■□□□□ 0.15
SEC13-218ENST00000490283 KANK2Q63ZY3 851 aa15.96■□□□□ 0.15
SEC13-218ENST00000490283 TMEM107Q6UX40 140 aa15.96■□□□□ 0.15
SEC13-218ENST00000490283 LARP4Q71RC2 724 aaKnown RBP eCLIP15.96■□□□□ 0.15
SEC13-218ENST00000490283 SLC44A2Q8IWA5 706 aaPredicted RBP15.96■□□□□ 0.15
SEC13-218ENST00000490283 PM20D2Q8IYS1 436 aa15.96■□□□□ 0.15
SEC13-218ENST00000490283 CLYBLQ8N0X4 340 aa15.96■□□□□ 0.15
SEC13-218ENST00000490283 LILRB4Q8NHJ6 448 aa15.96■□□□□ 0.15
SEC13-218ENST00000490283 ZFP28Q8NHY6 868 aa15.96■□□□□ 0.15
SEC13-218ENST00000490283 PPP1R14CQ8TAE6 165 aa15.96■□□□□ 0.15
SEC13-218ENST00000490283 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.96■□□□□ 0.15
SEC13-218ENST00000490283 TWIST2Q8WVJ9 160 aa15.96■□□□□ 0.15
SEC13-218ENST00000490283 VSTM2LQ96N03 204 aa15.96■□□□□ 0.15
SEC13-218ENST00000490283 NODALQ96S42 347 aa15.96■□□□□ 0.15
SEC13-218ENST00000490283 ADOQ96SZ5 270 aa15.96■□□□□ 0.15
SEC13-218ENST00000490283 MECRQ9BV79 373 aa15.96■□□□□ 0.15
SEC13-218ENST00000490283 TRAF6Q9Y4K3 522 aa15.96■□□□□ 0.15
SEC13-218ENST00000490283 CCL27Q9Y4X3 112 aa15.96■□□□□ 0.15
SEC13-218ENST00000490283 PTGDR2Q9Y5Y4 395 aa15.96■□□□□ 0.15
SEC13-218ENST00000490283 ZNF407Q9C0G0 2248 aa15.95■□□□□ 0.14
SEC13-218ENST00000490283 PCNX1Q96RV3 2341 aa15.95■□□□□ 0.14
SEC13-218ENST00000490283 SNPHO15079 494 aa15.95■□□□□ 0.14
SEC13-218ENST00000490283 RGS16O15492 202 aaPredicted RBP15.95■□□□□ 0.14
SEC13-218ENST00000490283 PDPK1O15530 556 aa15.95■□□□□ 0.14
SEC13-218ENST00000490283 ICOSLGO75144 302 aa15.95■□□□□ 0.14
SEC13-218ENST00000490283 CHRNGP07510 517 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms