RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 C9orf172C9J069 976 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 C5orf58C9J3I9 102 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 H0Y3Z8 333 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 PCDH17O14917 1159 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 ALOX12BO75342 701 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 PDE9AO76083 593 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 STK17BO94768 372 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 NKX2-2O95096 273 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 AK1P00568 194 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 SERPINA1P01009 418 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 CLPSP04118 112 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 IGKV3-11P04433 115 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 BCHEP06276 602 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 HEXBP07686 556 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 ANPEPP15144 967 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 TNNI3P19429 210 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 CRYBA2P53672 197 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 CRISP3P54108 245 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 EMP2P54851 167 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 FUT5Q11128 374 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 NCF4Q15080 339 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 SNCBQ16143 134 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 ATAD3BQ5T9A4 648 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 TMEM164Q5U3C3 297 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 MLIPQ5VWP3 458 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 AP1ARQ63HQ0 302 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 TMEM205Q6UW68 189 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 EIF3MQ7L2H7 374 aaKnown RBP13.18□□□□□ -0.3
VPS26A-205ENST00000489656 ANKRD37Q7Z713 158 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 ZNF615Q8N8J6 731 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 SLC16A11Q8NCK7 471 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 GALNT6Q8NCL4 622 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 MORN4Q8NDC4 146 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 CHDHQ8NE62 594 aaPredicted RBP13.18□□□□□ -0.3
VPS26A-205ENST00000489656 OR52R1Q8NGF1 315 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 BBS10Q8TAM1 723 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 XAGE5Q8WWM1 108 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 DAZLQ92904 295 aaKnown RBP13.18□□□□□ -0.3
VPS26A-205ENST00000489656 RNF31Q96EP0 1072 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 SLC35A4Q96G79 324 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 VSTM2LQ96N03 204 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 TRNT1Q96Q11 434 aaKnown RBP13.18□□□□□ -0.3
VPS26A-205ENST00000489656 YIPF4Q9BSR8 244 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 CNPPD1Q9BV87 410 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 BTBD2Q9BX70 525 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 UGT2B28Q9BY64 529 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 FAM117AQ9C073 453 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 MAGIXQ9H6Y5 334 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 AKIRIN1Q9H9L7 192 aaPredicted RBP13.18□□□□□ -0.3
VPS26A-205ENST00000489656 FOLH1BQ9HBA9 442 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 PNO1Q9NRX1 252 aaKnown RBP13.18□□□□□ -0.3
VPS26A-205ENST00000489656 CALML5Q9NZT1 146 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 NKX1-2Q9UD57 310 aaPredicted RBP13.18□□□□□ -0.3
VPS26A-205ENST00000489656 ANGPTL2Q9UKU9 493 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 ERVK-19Q9WJR5 959 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 PCDHGB3Q9Y5G1 929 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 CLCA3PQ9Y6N3 262 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 CEP250Q9BV73 2442 aa13.18□□□□□ -0.3
VPS26A-205ENST00000489656 A0A0G2JPF8 293 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 HNRNPCL2B2RXH8 293 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 HNRNPCL3B7ZW38 293 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 HRKO00198 91 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 SLC28A2O43868 658 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 PGM3O95394 542 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 DDAH2O95865 285 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 IFNA14P01570 189 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 GUSBP08236 651 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 ALOX5P09917 674 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 RAB40ALP0C0E4 278 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 HNRNPCL4P0DMR1 293 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 NR2F1P10589 423 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 ETS2P15036 469 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 SSTR4P31391 388 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 SLC5A2P31639 672 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 SLC34A1Q06495 639 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 SYPL1Q16563 259 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 DUSP5Q16690 384 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 ARHGAP11BQ3KRB8 267 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 LRRC23Q53EV4 343 aaPredicted RBP13.17□□□□□ -0.3
VPS26A-205ENST00000489656 CYBRD1Q53TN4 286 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 C6orf15Q6UXA7 325 aaPredicted RBP13.17□□□□□ -0.3
VPS26A-205ENST00000489656 LRRC74BQ6ZQY2 392 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 PRSS58Q8IYP2 241 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 FBXO30Q8TB52 745 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 DOK4Q8TEW6 326 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 METTL21AQ8WXB1 218 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 SENP5Q96HI0 755 aaPredicted RBP13.17□□□□□ -0.3
VPS26A-205ENST00000489656 SLC46A1Q96NT5 459 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 TREX2Q9BQ50 279 aaPredicted RBP13.17□□□□□ -0.3
VPS26A-205ENST00000489656 OR10A5Q9H207 317 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 SOX17Q9H6I2 414 aaPredicted RBP13.17□□□□□ -0.3
VPS26A-205ENST00000489656 PRODH2Q9UF12 536 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 C3orf18Q9UK00 162 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 PADI1Q9ULC6 663 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 PPIEQ9UNP9 301 aaKnown RBP13.17□□□□□ -0.3
VPS26A-205ENST00000489656 CFL2Q9Y281 166 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 KCNE3Q9Y6H6 103 aa13.17□□□□□ -0.3
VPS26A-205ENST00000489656 DSPPQ9NZW4 1301 aa13.16□□□□□ -0.3
VPS26A-205ENST00000489656 TMEM229AB2RXF0 380 aa13.16□□□□□ -0.3
VPS26A-205ENST00000489656 HNRNPRO43390 633 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms