RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 HBEGFQ99075 208 aa10.7□□□□□ -0.7
ACTN4-206ENST00000489451 TUBA1CQ9BQE3 449 aa10.7□□□□□ -0.7
ACTN4-206ENST00000489451 PLEKHF2Q9H8W4 249 aa10.7□□□□□ -0.7
ACTN4-206ENST00000489451 HEY2Q9UBP5 337 aa10.7□□□□□ -0.7
ACTN4-206ENST00000489451 CSPG4Q6UVK1 2322 aa10.7□□□□□ -0.7
ACTN4-206ENST00000489451 PCNX3Q9H6A9 2034 aa10.69□□□□□ -0.7
ACTN4-206ENST00000489451 CAPN14A8MX76 684 aa10.69□□□□□ -0.7
ACTN4-206ENST00000489451 TRIM49D1C9J1S8 452 aa10.69□□□□□ -0.7
ACTN4-206ENST00000489451 ICOSLGO75144 302 aa10.69□□□□□ -0.7
ACTN4-206ENST00000489451 SMIM24O75264 130 aa10.69□□□□□ -0.7
ACTN4-206ENST00000489451 IL2RAP01589 272 aa10.69□□□□□ -0.7
ACTN4-206ENST00000489451 FOSL1P15407 271 aa10.69□□□□□ -0.7
ACTN4-206ENST00000489451 CHN1P15882 459 aa10.69□□□□□ -0.7
ACTN4-206ENST00000489451 PCSK2P16519 638 aa10.69□□□□□ -0.7
ACTN4-206ENST00000489451 CTSSP25774 331 aa10.69□□□□□ -0.7
ACTN4-206ENST00000489451 TMED10P49755 219 aaKnown RBP10.69□□□□□ -0.7
ACTN4-206ENST00000489451 MAPK12P53778 367 aa10.69□□□□□ -0.7
ACTN4-206ENST00000489451 CDH13P55290 713 aa10.69□□□□□ -0.7
ACTN4-206ENST00000489451 MRPS35P82673 323 aaKnown RBP10.69□□□□□ -0.7
ACTN4-206ENST00000489451 SGO1Q5FBB7 561 aa10.69□□□□□ -0.7
ACTN4-206ENST00000489451 CCNYL2Q5T2Q4 361 aa10.69□□□□□ -0.7
ACTN4-206ENST00000489451 HLA-DQA1Q5Y7H0 255 aa10.69□□□□□ -0.7
ACTN4-206ENST00000489451 PACS2Q86VP3 889 aa10.69□□□□□ -0.7
ACTN4-206ENST00000489451 OR52R1Q8NGF1 315 aa10.69□□□□□ -0.7
ACTN4-206ENST00000489451 OR1J4Q8NGS1 313 aa10.69□□□□□ -0.7
ACTN4-206ENST00000489451 RNF138Q8WVD3 245 aa10.69□□□□□ -0.7
ACTN4-206ENST00000489451 MBD6Q96DN6 1003 aa10.69□□□□□ -0.7
ACTN4-206ENST00000489451 HSPBAP1Q96EW2 488 aa10.69□□□□□ -0.7
ACTN4-206ENST00000489451 ALPK1Q96QP1 1244 aa10.69□□□□□ -0.7
ACTN4-206ENST00000489451 OSBPL11Q9BXB4 747 aa10.69□□□□□ -0.7
ACTN4-206ENST00000489451 BRINP2Q9C0B6 783 aa10.69□□□□□ -0.7
ACTN4-206ENST00000489451 OR2B2Q9GZK3 357 aa10.69□□□□□ -0.7
ACTN4-206ENST00000489451 SERHLQ9NQF3 203 aa10.69□□□□□ -0.7
ACTN4-206ENST00000489451 SLC12A4Q9UP95 1085 aa10.69□□□□□ -0.7
ACTN4-206ENST00000489451 MAPRE3Q9UPY8 281 aa10.69□□□□□ -0.7
ACTN4-206ENST00000489451 NBEAL1Q6ZS30 2694 aa10.69□□□□□ -0.7
ACTN4-206ENST00000489451 C1orf226A1L170 272 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 A8MT66 165 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 EEF1E1-BLOC1S5C9J1V9 151 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 TO15178 435 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 EEF1E1O43324 174 aaKnown RBP10.68□□□□□ -0.7
ACTN4-206ENST00000489451 RIPK2O43353 540 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 ERAL1O75616 437 aaKnown RBP10.68□□□□□ -0.7
ACTN4-206ENST00000489451 IL18BPO95998 194 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 HRGP04196 525 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 EPXP11678 715 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 CPN1P15169 458 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 NAGAP17050 411 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 ARL1P40616 181 aaPredicted RBP10.68□□□□□ -0.7
ACTN4-206ENST00000489451 PEX19P40855 299 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 LHX2P50458 406 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 GFRA1P56159 465 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 NRG3P56975 720 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 RAE1P78406 368 aaKnown RBP10.68□□□□□ -0.7
ACTN4-206ENST00000489451 SORDQ00796 357 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 IFT88Q13099 833 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 PRSS53Q2L4Q9 553 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 ZNF628Q5EBL2 1059 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 TEX35Q5T0J7 233 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 NPSR1Q6W5P4 371 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 LCA5Q86VQ0 697 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 WFDC11Q8NEX6 87 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 ZPLD1Q8TCW7 415 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 TRPC4APQ8TEL6 797 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 DCAKDQ8WVC6 231 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.68□□□□□ -0.7
ACTN4-206ENST00000489451 ATP6V1E2Q96A05 226 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 LCORQ96JN0 433 aaPredicted RBP10.68□□□□□ -0.7
ACTN4-206ENST00000489451 MRPL57Q9BQC6 102 aaKnown RBP10.68□□□□□ -0.7
ACTN4-206ENST00000489451 C1QTNF3Q9BXJ4 246 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 METTL7AQ9H8H3 244 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 L2HGDHQ9H9P8 463 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 CALHM2Q9HA72 323 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 CLCF1Q9UBD9 225 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 FOXD3Q9UJU5 478 aaPredicted RBP10.68□□□□□ -0.7
ACTN4-206ENST00000489451 FBXL2Q9UKC9 423 aa10.68□□□□□ -0.7
ACTN4-206ENST00000489451 EXO1Q9UQ84 846 aaKnown RBP10.68□□□□□ -0.7
ACTN4-206ENST00000489451 PRAMEF25A6NGN4 478 aa10.67□□□□□ -0.7
ACTN4-206ENST00000489451 FRG2CA6NGY1 282 aa10.67□□□□□ -0.7
ACTN4-206ENST00000489451 TUBAL3A6NHL2 446 aa10.67□□□□□ -0.7
ACTN4-206ENST00000489451 SIAH2O43255 324 aa10.67□□□□□ -0.7
ACTN4-206ENST00000489451 TSPAN2O60636 221 aa10.67□□□□□ -0.7
ACTN4-206ENST00000489451 OR4F21O95013 312 aa10.67□□□□□ -0.7
ACTN4-206ENST00000489451 ACTL6AO96019 429 aa10.67□□□□□ -0.7
ACTN4-206ENST00000489451 TMIGD3P0DMS9 266 aaPredicted RBP10.67□□□□□ -0.7
ACTN4-206ENST00000489451 CT45A8P0DMV1 189 aa10.67□□□□□ -0.7
ACTN4-206ENST00000489451 CT45A9P0DMV2 189 aa10.67□□□□□ -0.7
ACTN4-206ENST00000489451 CSNK2A2P19784 350 aaPredicted RBP10.67□□□□□ -0.7
ACTN4-206ENST00000489451 DNASE1P24855 282 aa10.67□□□□□ -0.7
ACTN4-206ENST00000489451 GCAP28676 217 aa10.67□□□□□ -0.7
ACTN4-206ENST00000489451 STARP49675 285 aa10.67□□□□□ -0.7
ACTN4-206ENST00000489451 HTR6P50406 440 aa10.67□□□□□ -0.7
ACTN4-206ENST00000489451 GAS1P54826 345 aa10.67□□□□□ -0.7
ACTN4-206ENST00000489451 CORO7P57737 925 aa10.67□□□□□ -0.7
ACTN4-206ENST00000489451 HMGCS1Q01581 520 aa10.67□□□□□ -0.7
ACTN4-206ENST00000489451 PLCXD2Q0VAA5 305 aa10.67□□□□□ -0.7
ACTN4-206ENST00000489451 SLC29A2Q14542 456 aa10.67□□□□□ -0.7
ACTN4-206ENST00000489451 TOMM20Q15388 145 aa10.67□□□□□ -0.7
ACTN4-206ENST00000489451 CT45A2Q5DJT8 189 aa10.67□□□□□ -0.7
ACTN4-206ENST00000489451 TTC19Q6DKK2 380 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms