RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 NINQ8N4C6 2090 aa13.98□□□□□ -0.17
FDPS-213ENST00000489003 FRG2CA6NGY1 282 aa13.97□□□□□ -0.17
FDPS-213ENST00000489003 PGRP06401 933 aa13.97□□□□□ -0.17
FDPS-213ENST00000489003 ABCB1P08183 1280 aaPredicted RBP13.97□□□□□ -0.17
FDPS-213ENST00000489003 TROVE2P10155 538 aaKnown RBP eCLIP13.97□□□□□ -0.17
FDPS-213ENST00000489003 NAGAP17050 411 aa13.97□□□□□ -0.17
FDPS-213ENST00000489003 MAP3K8P41279 467 aa13.97□□□□□ -0.17
FDPS-213ENST00000489003 POLR2JP52435 117 aaKnown RBP13.97□□□□□ -0.17
FDPS-213ENST00000489003 ARFIP2P53365 341 aa13.97□□□□□ -0.17
FDPS-213ENST00000489003 NRG3P56975 720 aa13.97□□□□□ -0.17
FDPS-213ENST00000489003 GAB1Q13480 694 aa13.97□□□□□ -0.17
FDPS-213ENST00000489003 INPP5JQ15735 1006 aaPredicted RBP13.97□□□□□ -0.17
FDPS-213ENST00000489003 MAPKAPK3Q16644 382 aa13.97□□□□□ -0.17
FDPS-213ENST00000489003 RTL4Q6ZR62 310 aa13.97□□□□□ -0.17
FDPS-213ENST00000489003 GALNTL5Q7Z4T8 443 aa13.97□□□□□ -0.17
FDPS-213ENST00000489003 WDR53Q7Z5U6 358 aaPredicted RBP13.97□□□□□ -0.17
FDPS-213ENST00000489003 OR4N2Q8NGD1 307 aa13.97□□□□□ -0.17
FDPS-213ENST00000489003 SNRNP40Q96DI7 357 aaKnown RBP13.97□□□□□ -0.17
FDPS-213ENST00000489003 C16orf58Q96GQ5 468 aa13.97□□□□□ -0.17
FDPS-213ENST00000489003 BTBD9Q96Q07 612 aa13.97□□□□□ -0.17
FDPS-213ENST00000489003 OR52E6Q96RD3 313 aa13.97□□□□□ -0.17
FDPS-213ENST00000489003 TAAR6Q96RI8 345 aa13.97□□□□□ -0.17
FDPS-213ENST00000489003 LMF2Q9BU23 707 aaKnown RBP13.97□□□□□ -0.17
FDPS-213ENST00000489003 TMEM120AQ9BXJ8 343 aa13.97□□□□□ -0.17
FDPS-213ENST00000489003 EPN3Q9H201 632 aa13.97□□□□□ -0.17
FDPS-213ENST00000489003 SH2D2AQ9NP31 389 aa13.97□□□□□ -0.17
FDPS-213ENST00000489003 TIMMDC1Q9NPL8 285 aa13.97□□□□□ -0.17
FDPS-213ENST00000489003 ZCCHC3Q9NUD5 404 aaKnown RBP13.97□□□□□ -0.17
FDPS-213ENST00000489003 FAM120CQ9NX05 1096 aaKnown RBP13.97□□□□□ -0.17
FDPS-213ENST00000489003 FAM53CQ9NYF3 392 aa13.97□□□□□ -0.17
FDPS-213ENST00000489003 BTNL2Q9UIR0 455 aa13.97□□□□□ -0.17
FDPS-213ENST00000489003 NTNG1Q9Y2I2 539 aa13.97□□□□□ -0.17
FDPS-213ENST00000489003 SNX8Q9Y5X2 465 aa13.97□□□□□ -0.17
FDPS-213ENST00000489003 COPG1Q9Y678 874 aaKnown RBP13.97□□□□□ -0.17
FDPS-213ENST00000489003 EXPH5Q8NEV8 1989 aa13.96□□□□□ -0.17
FDPS-213ENST00000489003 CAPN14A8MX76 684 aa13.96□□□□□ -0.17
FDPS-213ENST00000489003 ACOX3O15254 700 aa13.96□□□□□ -0.17
FDPS-213ENST00000489003 NME2P1O60361 137 aa13.96□□□□□ -0.17
FDPS-213ENST00000489003 IL6P05231 212 aa13.96□□□□□ -0.17
FDPS-213ENST00000489003 CD1EP15812 388 aa13.96□□□□□ -0.17
FDPS-213ENST00000489003 NME2P22392 152 aa13.96□□□□□ -0.17
FDPS-213ENST00000489003 ABCD3P28288 659 aa13.96□□□□□ -0.17
FDPS-213ENST00000489003 GABRA3P34903 492 aa13.96□□□□□ -0.17
FDPS-213ENST00000489003 FBXW4P57775 412 aa13.96□□□□□ -0.17
FDPS-213ENST00000489003 PRR5P85299 388 aa13.96□□□□□ -0.17
FDPS-213ENST00000489003 NTRK2Q16620 822 aa13.96□□□□□ -0.17
FDPS-213ENST00000489003 PRR30Q53SZ7 412 aaPredicted RBP13.96□□□□□ -0.17
FDPS-213ENST00000489003 EXOSC6Q5RKV6 272 aaKnown RBP13.96□□□□□ -0.17
FDPS-213ENST00000489003 METTL21CQ5VZV1 264 aa13.96□□□□□ -0.17
FDPS-213ENST00000489003 DESI1Q6ICB0 168 aa13.96□□□□□ -0.17
FDPS-213ENST00000489003 NUP54Q7Z3B4 507 aa13.96□□□□□ -0.17
FDPS-213ENST00000489003 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.96□□□□□ -0.17
FDPS-213ENST00000489003 SLC44A2Q8IWA5 706 aaPredicted RBP13.96□□□□□ -0.17
FDPS-213ENST00000489003 SULF2Q8IWU5 870 aa13.96□□□□□ -0.17
FDPS-213ENST00000489003 DND1Q8IYX4 353 aaKnown RBP13.96□□□□□ -0.17
FDPS-213ENST00000489003 SLC34A3Q8N130 599 aa13.96□□□□□ -0.17
FDPS-213ENST00000489003 GOLM1Q8NBJ4 401 aa13.96□□□□□ -0.17
FDPS-213ENST00000489003 TMEM178AQ8NBL3 297 aa13.96□□□□□ -0.17
FDPS-213ENST00000489003 PSD4Q8NDX1 1056 aa13.96□□□□□ -0.17
FDPS-213ENST00000489003 OR4A15Q8NGL6 344 aa13.96□□□□□ -0.17
FDPS-213ENST00000489003 GOT1L1Q8NHS2 421 aaPredicted RBP13.96□□□□□ -0.17
FDPS-213ENST00000489003 HOXB13Q92826 284 aaPredicted RBP13.96□□□□□ -0.17
FDPS-213ENST00000489003 TMBIM1Q969X1 311 aa13.96□□□□□ -0.17
FDPS-213ENST00000489003 TMEM125Q96AQ2 219 aa13.96□□□□□ -0.17
FDPS-213ENST00000489003 OMA1Q96E52 524 aa13.96□□□□□ -0.17
FDPS-213ENST00000489003 CHMP6Q96FZ7 201 aa13.96□□□□□ -0.17
FDPS-213ENST00000489003 INPP5KQ9BT40 448 aa13.96□□□□□ -0.17
FDPS-213ENST00000489003 EQTNQ9NQ60 294 aa13.96□□□□□ -0.17
FDPS-213ENST00000489003 SPTA1P02549 2419 aa13.96□□□□□ -0.17
FDPS-213ENST00000489003 FAM234BA2RU67 622 aa13.95□□□□□ -0.18
FDPS-213ENST00000489003 TTC36A6NLP5 189 aa13.95□□□□□ -0.18
FDPS-213ENST00000489003 KALRNO60229 2985 aa13.95□□□□□ -0.18
FDPS-213ENST00000489003 REM1O75628 298 aa13.95□□□□□ -0.18
FDPS-213ENST00000489003 PPM1BO75688 479 aa13.95□□□□□ -0.18
FDPS-213ENST00000489003 NKX2-2O95096 273 aa13.95□□□□□ -0.18
FDPS-213ENST00000489003 HMGN2P05204 90 aaKnown RBP13.95□□□□□ -0.18
FDPS-213ENST00000489003 ACP2P11117 423 aa13.95□□□□□ -0.18
FDPS-213ENST00000489003 NCF2P19878 526 aaPredicted RBP13.95□□□□□ -0.18
FDPS-213ENST00000489003 CNR1P21554 472 aa13.95□□□□□ -0.18
FDPS-213ENST00000489003 ATP4BP51164 291 aa13.95□□□□□ -0.18
FDPS-213ENST00000489003 SEC24CP53992 1094 aa13.95□□□□□ -0.18
FDPS-213ENST00000489003 STX1BP61266 288 aa13.95□□□□□ -0.18
FDPS-213ENST00000489003 IRX1P78414 480 aaPredicted RBP13.95□□□□□ -0.18
FDPS-213ENST00000489003 ZNF155Q12901 538 aaPredicted RBP13.95□□□□□ -0.18
FDPS-213ENST00000489003 SLC22A10Q63ZE4 541 aa13.95□□□□□ -0.18
FDPS-213ENST00000489003 ZCCHC12Q6PEW1 402 aa13.95□□□□□ -0.18
FDPS-213ENST00000489003 PRICKLE2Q7Z3G6 844 aa13.95□□□□□ -0.18
FDPS-213ENST00000489003 C6orf120Q7Z4R8 191 aa13.95□□□□□ -0.18
FDPS-213ENST00000489003 CLEC4FQ8N1N0 589 aa13.95□□□□□ -0.18
FDPS-213ENST00000489003 CDRT4Q8N9R6 151 aa13.95□□□□□ -0.18
FDPS-213ENST00000489003 OR10G3Q8NGC4 313 aa13.95□□□□□ -0.18
FDPS-213ENST00000489003 OR5M3Q8NGP4 307 aa13.95□□□□□ -0.18
FDPS-213ENST00000489003 PAQR8Q8TEZ7 354 aa13.95□□□□□ -0.18
FDPS-213ENST00000489003 MOAP1Q96BY2 351 aa13.95□□□□□ -0.18
FDPS-213ENST00000489003 CCDC115Q96NT0 180 aa13.95□□□□□ -0.18
FDPS-213ENST00000489003 BARD1Q99728 777 aaKnown RBP13.95□□□□□ -0.18
FDPS-213ENST00000489003 YIPF4Q9BSR8 244 aa13.95□□□□□ -0.18
FDPS-213ENST00000489003 ZNF385DQ9H6B1 395 aa13.95□□□□□ -0.18
FDPS-213ENST00000489003 PROK2Q9HC23 129 aa13.95□□□□□ -0.18
FDPS-213ENST00000489003 NEUROD4Q9HD90 331 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms