RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 IGSF6O95976 241 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 GHRP10912 638 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 TSPAN8P19075 237 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 FUT1P19526 365 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 CCNA2P20248 432 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 IDSP22304 550 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 MAPK3P27361 379 aaPredicted RBP2.5□□□□□ -2.01
CD46-215ENST00000488596 NOP14P78316 857 aaKnown RBP2.5□□□□□ -2.01
CD46-215ENST00000488596 ZNF33BQ06732 778 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 FUT7Q11130 342 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 SPP2Q13103 211 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 RFTN1Q14699 578 aaPredicted RBP2.5□□□□□ -2.01
CD46-215ENST00000488596 CEBPEQ15744 281 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 C15orf32Q32M92 178 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 PARP10Q53GL7 1025 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 LINC00242Q5T6M2 205 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 SEL1L3Q68CR1 1132 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 PNCKQ6P2M8 343 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 ATRAIDQ6UW56 229 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 CENPSQ8N2Z9 138 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.5□□□□□ -2.01
CD46-215ENST00000488596 MRPL43Q8N983 215 aaKnown RBP2.5□□□□□ -2.01
CD46-215ENST00000488596 WDR36Q8NI36 951 aaKnown RBP2.5□□□□□ -2.01
CD46-215ENST00000488596 TBCKQ8TEA7 893 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 CRYGNQ8WXF5 182 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 DLX4Q92988 240 aaPredicted RBP2.5□□□□□ -2.01
CD46-215ENST00000488596 PIWIL1Q96J94 861 aaKnown RBP2.5□□□□□ -2.01
CD46-215ENST00000488596 C1orf147Q96MC9 270 aaPredicted RBP2.5□□□□□ -2.01
CD46-215ENST00000488596 FAM173AQ9BQD7 235 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 KRT23Q9C075 422 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 RAB17Q9H0T7 212 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 C1orf21Q9H246 121 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 TMEM231Q9H6L2 316 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 FAM114A2Q9NRY5 505 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 CUTCQ9NTM9 273 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 GDAP2Q9NXN4 497 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 GPR83Q9NYM4 423 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 PRODH2Q9UF12 536 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 FZR1Q9UM11 496 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 CLCA3PQ9Y6N3 262 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 ABCC4O15439 1325 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 NPIPA5A0A0B4J1W7 369 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 NPIPA5E9PKD4 350 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 H0YL77 283 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.49□□□□□ -2.01
CD46-215ENST00000488596 SSX5O60225 188 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 SRSF10O75494 262 aaKnown RBP2.49□□□□□ -2.01
CD46-215ENST00000488596 KBTBD11O94819 623 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 IGHV3-9P01782 118 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 WNT2P09544 360 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 HOXB7P09629 217 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 RALAP11233 206 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 MAGEA4P43358 317 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 CAMLGP49069 296 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 NUMBP49757 651 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 TRA2BP62995 288 aaKnown RBP2.49□□□□□ -2.01
CD46-215ENST00000488596 ZNF85Q03923 595 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 SRYQ05066 204 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 BNIP1Q12981 228 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 PDIA5Q14554 519 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 ZSWIM7Q19AV6 140 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 LRIT3Q3SXY7 679 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 MS4A13Q5J8X5 152 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 TOR1AIP1Q5JTV8 583 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 RAET1GQ6H3X3 334 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 PRR5LQ6MZQ0 368 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 CCBE1Q6UXH8 406 aaPredicted RBP2.49□□□□□ -2.01
CD46-215ENST00000488596 ZNF600Q6ZNG1 722 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 STOX1Q6ZVD7 989 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 GOLGA7Q7Z5G4 137 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 RANBP3LQ86VV4 465 aaPredicted RBP2.49□□□□□ -2.01
CD46-215ENST00000488596 ARL14Q8N4G2 192 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 HDDC3Q8N4P3 179 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 ARFGAP2Q8N6H7 521 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 RNF148Q8N7C7 305 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 BEST4Q8NFU0 473 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 RHOXF1Q8NHV9 184 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 AGAP11Q8TF27 550 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 DNAJA3Q96EY1 480 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 RANBP9Q96S59 729 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 C19orf43Q9BQ61 176 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 APOL2Q9BQE5 337 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 ATG10Q9H0Y0 220 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 ZBP1Q9H171 429 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 NGBQ9NPG2 151 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 YAE1D1Q9NRH1 226 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 CENPMQ9NSP4 180 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 CLEC5AQ9NY25 188 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 MBD2Q9UBB5 411 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 BCAP29Q9UHQ4 241 aa2.49□□□□□ -2.01
CD46-215ENST00000488596 HOOK1Q9UJC3 728 aaKnown RBP2.49□□□□□ -2.01
CD46-215ENST00000488596 PURGQ9UJV8 347 aaKnown RBP2.49□□□□□ -2.01
CD46-215ENST00000488596 ADAMTS9Q9P2N4 1935 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 IGHV3OR16-12A0A075B7B8 117 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 LRIT2A6NDA9 550 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 MFSD2BA6NFX1 497 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 C11orf98E9PRG8 122 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 PDLIM1O00151 329 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 RASGRF2O14827 1237 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 BCL2L11O43521 198 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms