RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 ZNF729A6NN14 1252 aaPredicted RBP4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 ZAR1LA6NP61 321 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 EFCAB7A8K855 629 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 YDJCA8MPS7 323 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 LACTBL1A8MY62 500 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 E2F3O00716 465 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 PRKYO43930 277 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 RAD1O60671 282 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 ECI2O75521 394 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 AQP8O94778 261 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 AP2A2O94973 939 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 ZNF682O95780 498 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 GLP2RO95838 553 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 JCHAINP01591 159 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 APOC3P02656 99 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 HPXP02790 462 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 HRGP04196 525 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 DUX4L2P0CJ85 424 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 DUX4L3P0CJ86 424 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 DUX4L4P0CJ87 422 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 DUX4L5P0CJ88 424 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 DUX4L6P0CJ89 424 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 DUX4L7P0CJ90 424 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 SFTPCP11686 197 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 TYRP14679 529 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 UBA1P22314 1058 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 ATP5C1P36542 298 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 IDH2P48735 452 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 INPP1P49441 399 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 HNMTP50135 292 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 VSX2P58304 361 aaPredicted RBP4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 TPI1P60174 286 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 DCDP81605 110 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 STX4Q12846 297 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 PPIGQ13427 754 aaKnown RBP eCLIP4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 C1DQ13901 141 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 IL18Q14116 193 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 VEZF1Q14119 521 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 DMC1Q14565 340 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 NCF4Q15080 339 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 NR0B2Q15466 257 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 TAF1AQ15573 450 aaPredicted RBP4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 SGCAQ16586 387 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 FAM187BQ17R55 369 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 GSG1Q2KHT4 349 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 VMACQ2NL98 169 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 PLK5Q496M5 336 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 CRY2Q49AN0 593 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 SPANXN4Q5MJ08 99 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 HECTD3Q5T447 861 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 OR7E24Q6IFN5 339 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 FRMPD2BQ6IN97 320 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 MZT2AQ6P582 158 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 TMEM91Q6ZNR0 172 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 TRMT1LQ7Z2T5 733 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 ZNF551Q7Z340 670 aaPredicted RBP4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 SLC44A3Q8N4M1 653 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 C12orf45Q8N5I9 185 aaPredicted RBP4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 TMIEQ8NEW7 156 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 OR10G2Q8NGC3 310 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 OR2T35Q8NGX2 323 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 OR52P1PQ8NH57 321 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 NANPQ8TBE9 248 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 WDR20Q8TBZ3 569 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 CLEC4CQ8WTT0 213 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 GLYATL2Q8WU03 294 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 GTF3AQ92664 365 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 EXT2Q93063 718 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 ZDHHC12Q96GR4 267 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 HPDLQ96IR7 371 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 SLC2A13Q96QE2 648 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 NELL2Q99435 816 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 FEVQ99581 238 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 ELF4Q99607 663 aaPredicted RBP4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 SMAD5Q99717 465 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 ATF6BQ99941 703 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 C7orf50Q9BRJ6 194 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 SPATA5L1Q9BVQ7 753 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 PAPOLGQ9BWT3 736 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 BOCQ9BWV1 1114 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 ACTR6Q9GZN1 396 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 PDGFDQ9GZP0 370 aaPredicted RBP4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 NSUN3Q9H649 340 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 GLOD4Q9HC38 313 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 SLC6A13Q9NSD5 602 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 NUDT15Q9NV35 164 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 SPATA6Q9NWH7 488 aaPredicted RBP4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 CLN6Q9NWW5 311 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 SPHK1Q9NYA1 384 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 DUX4Q9UBX2 424 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 SEC14L3Q9UDX4 400 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 POLLQ9UGP5 575 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 BTNL2Q9UIR0 455 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 SRPK3Q9UPE1 567 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 ERVK-19Q9WJR5 959 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 ENTPD4Q9Y227 616 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 SLC22A7Q9Y694 548 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 UBR3Q6ZT12 1888 aa4.48□□□□□ -1.69
CDC42BPA-213ENST00000488131 A0A0G2JPF8 293 aa4.47□□□□□ -1.69
CDC42BPA-213ENST00000488131 A0A1B0GWJ7 208 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms