RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 NMRK1Q9NWW6 199 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 NINJ2Q9NZG7 142 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 STX18Q9P2W9 335 aaKnown RBP3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 ASIC3Q9UHC3 531 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 PCSK1NQ9UHG2 260 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 STX8Q9UNK0 236 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 PLCL2Q9UPR0 1127 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 PRELID1Q9Y255 219 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 RNF215Q9Y6U7 377 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 DEPDC5O75140 1603 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 TSPOAP1O95153 1857 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 C1orf167Q5SNV9 1468 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 CLTCQ00610 1675 aaKnown RBP3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 TMEM131LA2VDJ0 1609 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 WDR19Q8NEZ3 1342 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 A0A087WZ39 114 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 KRT87PA6NCN2 255 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 NKX6-3A6NJ46 265 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 CCDC169A6NNP5 214 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 TMEM114B3SHH9 223 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 E9PMD0 336 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 ZNF701M0R085 212 aaPredicted RBP3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 CACNB4O00305 520 aaPredicted RBP3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 FBP2O00757 339 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 MAGEB2O15479 319 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 PRPSAP2O60256 369 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 JAK2O60674 1132 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 CLN5O75503 358 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 CEACAM4O75871 244 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 BCAS2O75934 225 aaPredicted RBP3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 SORBS2O94875 1100 aaKnown RBP3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 CTDNEP1O95476 244 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 APBB3O95704 486 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 DLATP10515 647 aaKnown RBP3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 VCLP18206 1134 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 UGT1A4P22310 534 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 CRABP2P29373 138 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 PDHA2P29803 388 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 SERPINB6P35237 376 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 RPL5P46777 297 aaKnown RBP3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 RABIFP47224 123 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 TMEM50BP56557 158 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 KIAA1024LP59773 190 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 ATP6V0D1P61421 351 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 TNNC1P63316 161 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 IRX4P78413 519 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 C2orf54Q08AI8 447 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 RPA4Q13156 261 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 FASTKD3Q14CZ7 662 aaKnown RBP3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 UAP1Q16222 522 aaPredicted RBP3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 MOGAT2Q3SYC2 334 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 CCNJQ5T5M9 372 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 AGAP6Q5VW22 663 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 PM20D1Q6GTS8 502 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 NIPAL1Q6NVV3 410 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 FAAP20Q6NZ36 180 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 ZNF613Q6PF04 617 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 TMEM270Q6UE05 265 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 FRRS1Q6ZNA5 592 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 RGS9BPQ6ZS82 235 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 C15orf52Q6ZUT6 534 aaKnown RBP3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 COX8CQ7Z4L0 72 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 RABEPKQ7Z6M1 372 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 ITIH5Q86UX2 942 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 KRTAP7-1Q8IUC3 87 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 GRAMD2AQ8IUY3 354 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 AQP12AQ8IXF9 295 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 LRRC34Q8IZ02 419 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 CCDC185Q8N715 623 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 ZNF485Q8NCK3 441 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 LPCAT1Q8NF37 534 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 ANGPTL6Q8NI99 470 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 PYROXD1Q8WU10 500 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 SCFD1Q8WVM8 642 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 PRCCQ92733 491 aaPredicted RBP3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 ZNF689Q96CS4 500 aaPredicted RBP3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 CNRIP1Q96F85 164 aaPredicted RBP3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 EEF2KMTQ96G04 330 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 CFAP36Q96G28 342 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 PRICKLE1Q96MT3 831 aaPredicted RBP3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 FAM218AQ96MZ4 157 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 PANX3Q96QZ0 392 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 IL12RB2Q99665 862 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 PRMT1Q99873 361 aaKnown RBP3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 CTRCQ99895 268 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 UBAC1Q9BSL1 405 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 CRNKL1Q9BZJ0 848 aaKnown RBP3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 ROPN1BQ9BZX4 212 aaPredicted RBP3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 ROPN1Q9HAT0 212 aaPredicted RBP3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 C3orf14Q9HBI5 128 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 ETNK2Q9NVF9 386 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 ARMC1Q9NVT9 282 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 COMMD8Q9NX08 183 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 NUDT4Q9NZJ9 180 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 UVRAGQ9P2Y5 699 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 SH3BGRL2Q9UJC5 107 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 FBXW2Q9UKT8 454 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 NOSIPQ9Y314 301 aaKnown RBP3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 IKBKGQ9Y6K9 419 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 NFAT5O94916 1531 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms