RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 CLDN9O95484 217 aa17.62■□□□□ 0.41
SMPDL3A-202ENST00000487215 GSTA2P09210 222 aa17.62■□□□□ 0.41
SMPDL3A-202ENST00000487215 ZNF708P17019 499 aa17.62■□□□□ 0.41
SMPDL3A-202ENST00000487215 SRD5A2P31213 254 aa17.62■□□□□ 0.41
SMPDL3A-202ENST00000487215 CLDN18P56856 261 aa17.62■□□□□ 0.41
SMPDL3A-202ENST00000487215 MAP4K2Q12851 820 aa17.62■□□□□ 0.41
SMPDL3A-202ENST00000487215 ACKR1Q16570 336 aa17.62■□□□□ 0.41
SMPDL3A-202ENST00000487215 SLC48A1Q6P1K1 146 aa17.62■□□□□ 0.41
SMPDL3A-202ENST00000487215 AAGABQ6PD74 315 aa17.62■□□□□ 0.41
SMPDL3A-202ENST00000487215 PLCZ1Q86YW0 608 aa17.62■□□□□ 0.41
SMPDL3A-202ENST00000487215 PIK3IP1Q96FE7 263 aa17.62■□□□□ 0.41
SMPDL3A-202ENST00000487215 PERPQ96FX8 193 aa17.62■□□□□ 0.41
SMPDL3A-202ENST00000487215 SFXN2Q96NB2 322 aa17.62■□□□□ 0.41
SMPDL3A-202ENST00000487215 CCL19Q99731 98 aa17.62■□□□□ 0.41
SMPDL3A-202ENST00000487215 MRPL1Q9BYD6 325 aaKnown RBP17.62■□□□□ 0.41
SMPDL3A-202ENST00000487215 FBXL2Q9UKC9 423 aa17.62■□□□□ 0.41
SMPDL3A-202ENST00000487215 ADAM29Q9UKF5 820 aa17.62■□□□□ 0.41
SMPDL3A-202ENST00000487215 CES1P1Q9UKY3 287 aa17.62■□□□□ 0.41
SMPDL3A-202ENST00000487215 PLLPQ9Y342 182 aa17.62■□□□□ 0.41
SMPDL3A-202ENST00000487215 PCDHA9Q9Y5H5 950 aa17.62■□□□□ 0.41
SMPDL3A-202ENST00000487215 FAM187AA6NFU0 413 aa17.61■□□□□ 0.41
SMPDL3A-202ENST00000487215 SMNDC1O75940 238 aaKnown RBP eCLIP17.61■□□□□ 0.41
SMPDL3A-202ENST00000487215 CBX7O95931 251 aa17.61■□□□□ 0.41
SMPDL3A-202ENST00000487215 ATP1B1P05026 303 aa17.61■□□□□ 0.41
SMPDL3A-202ENST00000487215 FPR1P21462 350 aa17.61■□□□□ 0.41
SMPDL3A-202ENST00000487215 CRYGSP22914 178 aa17.61■□□□□ 0.41
SMPDL3A-202ENST00000487215 FEN1P39748 380 aaKnown RBP17.61■□□□□ 0.41
SMPDL3A-202ENST00000487215 MC3RP41968 323 aa17.61■□□□□ 0.41
SMPDL3A-202ENST00000487215 PCYT1AP49585 367 aa17.61■□□□□ 0.41
SMPDL3A-202ENST00000487215 HMGCS1Q01581 520 aa17.61■□□□□ 0.41
SMPDL3A-202ENST00000487215 CCNYL2Q5T2Q4 361 aa17.61■□□□□ 0.41
SMPDL3A-202ENST00000487215 OR52B6Q8NGF0 335 aa17.61■□□□□ 0.41
SMPDL3A-202ENST00000487215 OR52R1Q8NGF1 315 aa17.61■□□□□ 0.41
SMPDL3A-202ENST00000487215 STARD4Q96DR4 205 aa17.61■□□□□ 0.41
SMPDL3A-202ENST00000487215 NOL11Q9H8H0 719 aaKnown RBP17.61■□□□□ 0.41
SMPDL3A-202ENST00000487215 ZNF226Q9NYT6 803 aa17.61■□□□□ 0.41
SMPDL3A-202ENST00000487215 WHRNQ9P202 907 aa17.61■□□□□ 0.41
SMPDL3A-202ENST00000487215 DLGAP4Q9Y2H0 992 aa17.61■□□□□ 0.41
SMPDL3A-202ENST00000487215 WIF1Q9Y5W5 379 aa17.61■□□□□ 0.41
SMPDL3A-202ENST00000487215 A0A087X1B8 175 aa17.6■□□□□ 0.41
SMPDL3A-202ENST00000487215 CCDC189A1A4V9 331 aa17.6■□□□□ 0.41
SMPDL3A-202ENST00000487215 GOLGA6L10A6NI86 522 aa17.6■□□□□ 0.41
SMPDL3A-202ENST00000487215 INAFM1C9JVW0 142 aa17.6■□□□□ 0.41
SMPDL3A-202ENST00000487215 OR7A17O14581 309 aa17.6■□□□□ 0.41
SMPDL3A-202ENST00000487215 ERAL1O75616 437 aaKnown RBP17.6■□□□□ 0.41
SMPDL3A-202ENST00000487215 C2P06681 752 aa17.6■□□□□ 0.41
SMPDL3A-202ENST00000487215 DRD5P21918 477 aa17.6■□□□□ 0.41
SMPDL3A-202ENST00000487215 CCKARP32238 428 aa17.6■□□□□ 0.41
SMPDL3A-202ENST00000487215 CD79BP40259 229 aa17.6■□□□□ 0.41
SMPDL3A-202ENST00000487215 ARL1P40616 181 aaPredicted RBP17.6■□□□□ 0.41
SMPDL3A-202ENST00000487215 DUSP2Q05923 314 aa17.6■□□□□ 0.41
SMPDL3A-202ENST00000487215 FAM83EQ2M2I3 478 aa17.6■□□□□ 0.41
SMPDL3A-202ENST00000487215 FRG2Q64ET8 278 aa17.6■□□□□ 0.41
SMPDL3A-202ENST00000487215 VWA1Q6PCB0 445 aa17.6■□□□□ 0.41
SMPDL3A-202ENST00000487215 PAGE2Q7Z2X7 111 aa17.6■□□□□ 0.41
SMPDL3A-202ENST00000487215 P4HA3Q7Z4N8 544 aa17.6■□□□□ 0.41
SMPDL3A-202ENST00000487215 ADCY4Q8NFM4 1077 aa17.6■□□□□ 0.41
SMPDL3A-202ENST00000487215 PPP1R14CQ8TAE6 165 aa17.6■□□□□ 0.41
SMPDL3A-202ENST00000487215 TMCO6Q96DC7 493 aa17.6■□□□□ 0.41
SMPDL3A-202ENST00000487215 FAM111AQ96PZ2 611 aa17.6■□□□□ 0.41
SMPDL3A-202ENST00000487215 FRG2BQ96QU4 278 aa17.6■□□□□ 0.41
SMPDL3A-202ENST00000487215 ERP44Q9BS26 406 aa17.6■□□□□ 0.41
SMPDL3A-202ENST00000487215 MED18Q9BUE0 208 aa17.6■□□□□ 0.41
SMPDL3A-202ENST00000487215 GRHL1Q9NZI5 618 aa17.6■□□□□ 0.41
SMPDL3A-202ENST00000487215 CPSF2Q9P2I0 782 aaKnown RBP17.6■□□□□ 0.41
SMPDL3A-202ENST00000487215 TNPO3Q9Y5L0 923 aaKnown RBP17.6■□□□□ 0.41
SMPDL3A-202ENST00000487215 C1orf226A1L170 272 aa17.59■□□□□ 0.41
SMPDL3A-202ENST00000487215 FRG2CA6NGY1 282 aa17.59■□□□□ 0.41
SMPDL3A-202ENST00000487215 OR6C70A6NIJ9 312 aa17.59■□□□□ 0.41
SMPDL3A-202ENST00000487215 TO15178 435 aa17.59■□□□□ 0.41
SMPDL3A-202ENST00000487215 CRHP06850 196 aa17.59■□□□□ 0.41
SMPDL3A-202ENST00000487215 CSNK2A2P19784 350 aaPredicted RBP17.59■□□□□ 0.41
SMPDL3A-202ENST00000487215 TCEA1P23193 301 aaKnown RBP17.59■□□□□ 0.41
SMPDL3A-202ENST00000487215 DEKP35659 375 aaKnown RBP17.59■□□□□ 0.41
SMPDL3A-202ENST00000487215 PPICP45877 212 aa17.59■□□□□ 0.41
SMPDL3A-202ENST00000487215 EMDP50402 254 aa17.59■□□□□ 0.41
SMPDL3A-202ENST00000487215 MAPK12P53778 367 aa17.59■□□□□ 0.41
SMPDL3A-202ENST00000487215 ACAP2Q15057 778 aa17.59■□□□□ 0.41
SMPDL3A-202ENST00000487215 LTB4RQ15722 352 aa17.59■□□□□ 0.41
SMPDL3A-202ENST00000487215 TRMT12Q53H54 448 aaKnown RBP17.59■□□□□ 0.41
SMPDL3A-202ENST00000487215 METTL2BQ6P1Q9 378 aaKnown RBP17.59■□□□□ 0.41
SMPDL3A-202ENST00000487215 ZNF474Q6S9Z5 364 aaPredicted RBP17.59■□□□□ 0.41
SMPDL3A-202ENST00000487215 METTL4Q8N3J2 472 aa17.59■□□□□ 0.41
SMPDL3A-202ENST00000487215 CNEP1R1Q8N9A8 125 aa17.59■□□□□ 0.41
SMPDL3A-202ENST00000487215 LRRN4CLQ8ND94 238 aa17.59■□□□□ 0.41
SMPDL3A-202ENST00000487215 FBF1Q8TES7 1133 aa17.59■□□□□ 0.41
SMPDL3A-202ENST00000487215 TMBIM1Q969X1 311 aa17.59■□□□□ 0.41
SMPDL3A-202ENST00000487215 ATP6V1E2Q96A05 226 aa17.59■□□□□ 0.41
SMPDL3A-202ENST00000487215 COL21A1Q96P44 957 aa17.59■□□□□ 0.41
SMPDL3A-202ENST00000487215 HS3ST6Q96QI5 342 aa17.59■□□□□ 0.41
SMPDL3A-202ENST00000487215 AHSPQ9NZD4 102 aa17.59■□□□□ 0.41
SMPDL3A-202ENST00000487215 PRODH2Q9UF12 536 aa17.59■□□□□ 0.41
SMPDL3A-202ENST00000487215 DKKL1Q9UK85 242 aa17.59■□□□□ 0.41
SMPDL3A-202ENST00000487215 MED12LQ86YW9 2145 aa17.59■□□□□ 0.41
SMPDL3A-202ENST00000487215 B4DXG7 233 aa17.58■□□□□ 0.4
SMPDL3A-202ENST00000487215 PCSK2P16519 638 aa17.58■□□□□ 0.4
SMPDL3A-202ENST00000487215 STX2P32856 288 aa17.58■□□□□ 0.4
SMPDL3A-202ENST00000487215 MRPS35P82673 323 aaKnown RBP17.58■□□□□ 0.4
SMPDL3A-202ENST00000487215 PPP2R2BQ00005 443 aa17.58■□□□□ 0.4
SMPDL3A-202ENST00000487215 NAB1Q13506 487 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms