RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 ATP8B3O60423 1300 aa3.58□□□□□ -1.84
PTCD3-216ENST00000487043 PTPRJQ12913 1337 aa3.58□□□□□ -1.84
PTCD3-216ENST00000487043 TRBV4-1A0A0J9YWV2 114 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 SMIM28A0A1B0GU29 152 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 MTMR11A4FU01 709 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 A8MVM7 634 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 ZNF732B4DXR9 585 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 PIRO00625 290 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 RASGRF2O14827 1237 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 TEX28O15482 410 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 MLNRO43193 412 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 ZSCAN12O43309 604 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 CLN5O75503 358 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 CDK2AP2O75956 126 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 OR6B1O95007 311 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 LCA5LO95447 670 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 NTN1O95631 604 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 HLA-DRAP01903 254 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 CRYAAP02489 173 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 MT-ND2P03891 347 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 KRT3P12035 628 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 KCNE1P15382 129 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 CYP3A5P20815 502 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 ACP1P24666 158 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 MSNP26038 577 aaKnown RBP3.57□□□□□ -1.84
PTCD3-216ENST00000487043 CYLC1P35663 651 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-216ENST00000487043 NSFP46459 744 aaKnown RBP3.57□□□□□ -1.84
PTCD3-216ENST00000487043 THBS3P49746 956 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 HSD17B7P56937 341 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 KRTAP10-7P60409 375 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-216ENST00000487043 MYL6P60660 151 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 TFAMQ00059 246 aaKnown RBP3.57□□□□□ -1.84
PTCD3-216ENST00000487043 KLHL30Q0D2K2 578 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 ITGA9Q13797 1035 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 GPNMBQ14956 572 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 TMEM132DQ14C87 1099 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 ZNF585BQ52M93 769 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 PDLIM3Q53GG5 364 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-216ENST00000487043 XKR6Q5GH73 641 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 ZNF324BQ6AW86 544 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-216ENST00000487043 TWF2Q6IBS0 349 aaKnown RBP3.57□□□□□ -1.84
PTCD3-216ENST00000487043 CD164L2Q6UWJ8 174 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 DLEU7Q6UYE1 221 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 RBMS3Q6XE24 437 aaKnown RBP3.57□□□□□ -1.84
PTCD3-216ENST00000487043 MACC1Q6ZN28 852 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 C17orf107Q6ZR85 190 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 SLC16A9Q7RTY1 509 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 ADCK1Q86TW2 530 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 EFCAB13Q8IY85 973 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 FAM71AQ8IYT1 594 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 STPG4Q8N801 248 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 ZBTB44Q8NCP5 570 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 TRPV3Q8NET8 790 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 UBTD2Q8WUN7 234 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 ESAMQ96AP7 390 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 SLCO4A1Q96BD0 722 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 SAMD8Q96LT4 415 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 CCDC42Q96M95 316 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 GUCD1Q96NT3 240 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 KCNK16Q96T55 309 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 FTHL17Q9BXU8 183 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 THAP2Q9H0W7 228 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 CXCL16Q9H2A7 254 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 NXF3Q9H4D5 531 aaKnown RBP3.57□□□□□ -1.84
PTCD3-216ENST00000487043 FAM124BQ9H5Z6 455 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-216ENST00000487043 C11orf49Q9H6J7 331 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 ZDHHC6Q9H6R6 413 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 NHEJ1Q9H9Q4 299 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-216ENST00000487043 RRAGDQ9NQL2 400 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-216ENST00000487043 RGS18Q9NS28 235 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 ZFP57Q9NU63 452 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 PILRBQ9UKJ0 227 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 PRDM4Q9UKN5 801 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 POMT2Q9UKY4 750 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 BLOC1S6Q9UL45 172 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 GRID1Q9ULK0 1009 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 TMCC3Q9ULS5 477 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 PYCARDQ9ULZ3 195 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 UBQLN1Q9UMX0 589 aaKnown RBP3.57□□□□□ -1.84
PTCD3-216ENST00000487043 PPP2R2CQ9Y2T4 447 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 HES2Q9Y543 173 aa3.57□□□□□ -1.84
PTCD3-216ENST00000487043 ANK1P16157 1881 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 A0A087X0T9 212 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 IGHV4-61A0A0C4DH41 118 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 F8VZ95 297 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 K7EPI3 171 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 SYT7O43581 403 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 BUB3O43684 328 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 SMPD2O60906 423 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 TRIM16O95361 564 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 IFNB1P01574 187 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 IGHV4-59P01825 116 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 CXCL10P02778 98 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 PLEKP08567 350 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-216ENST00000487043 FAM228BP0C875 321 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 ODC1P11926 461 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 KRT5P13647 590 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 ANXA13P27216 316 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 CHRNA3P32297 505 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 SLC1A3P43003 542 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms