RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 BATF3Q9NR55 127 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 MRPL39Q9NYK5 338 aaKnown RBP6.37□□□□□ -1.39
HDAC3-209ENST00000486618 ABI3Q9P2A4 366 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 CRNNQ9UBG3 495 aaPredicted RBP6.37□□□□□ -1.39
HDAC3-209ENST00000486618 LCMT1Q9UIC8 334 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 PLCL2Q9UPR0 1127 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 TDRKHQ9Y2W6 561 aaKnown RBP6.37□□□□□ -1.39
HDAC3-209ENST00000486618 STRAPQ9Y3F4 350 aaKnown RBP6.37□□□□□ -1.39
HDAC3-209ENST00000486618 HS3ST3B1Q9Y662 390 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 BZW2Q9Y6E2 419 aaKnown RBP6.37□□□□□ -1.39
HDAC3-209ENST00000486618 INTS1Q8N201 2190 aaKnown RBP6.37□□□□□ -1.39
HDAC3-209ENST00000486618 A0A0J9YY10 115 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 A0A1W2PN81 502 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 FAM230AA0A1W2PPH8 454 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 SNTNA6NMZ2 147 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 BUD23O43709 281 aaKnown RBP6.36□□□□□ -1.39
HDAC3-209ENST00000486618 ALOX12BO75342 701 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 RASAL1O95294 804 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 PRAMEF1O95521 474 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 NADKO95544 446 aaPredicted RBP6.36□□□□□ -1.39
HDAC3-209ENST00000486618 ONECUT2O95948 504 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 HPP00738 406 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 ACAA1P09110 424 aaPredicted RBP6.36□□□□□ -1.39
HDAC3-209ENST00000486618 OSMP13725 252 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 UGT2B7P16662 529 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 NAGAP17050 411 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 FDXRP22570 491 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 KDELR1P24390 212 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 CHRNA7P36544 502 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 CARSP49589 748 aaKnown RBP6.36□□□□□ -1.39
HDAC3-209ENST00000486618 PRLHRP49683 370 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 TNFSF10P50591 281 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 NME5P56597 212 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 WNT3AP56704 352 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 FOXL2P58012 376 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 TLE4Q04727 773 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 DYNC1I2Q13409 638 aaKnown RBP6.36□□□□□ -1.39
HDAC3-209ENST00000486618 CUL3Q13618 768 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 BOP1Q14137 746 aaKnown RBP6.36□□□□□ -1.39
HDAC3-209ENST00000486618 DEFB110Q30KQ9 67 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 PCGF3Q3KNV8 242 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 TMEM177Q53S58 311 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 FIGNQ5HY92 759 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 TOR2AQ5JU69 321 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 SIRPB2Q5JXA9 342 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 TTLL10Q6ZVT0 673 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 BZW1Q7L1Q6 419 aaKnown RBP6.36□□□□□ -1.39
HDAC3-209ENST00000486618 LRRC70Q7Z2Q7 622 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.36□□□□□ -1.39
HDAC3-209ENST00000486618 ZC3H7AQ8IWR0 971 aaKnown RBP6.36□□□□□ -1.39
HDAC3-209ENST00000486618 KBTBD2Q8IY47 623 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 LIX1Q8N485 282 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 DNAJC22Q8N4W6 341 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 CCNYL1Q8N7R7 359 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 POC5Q8NA72 575 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 BVESQ8NE79 360 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 SPATA4Q8NEY3 305 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 OR11G2Q8NGC1 345 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 OR52J3Q8NH60 311 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 LRRC8CQ8TDW0 803 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 GLMPQ8WWB7 406 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 CAPSLQ8WWF8 208 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 ATL1Q8WXF7 558 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 TFGQ92734 400 aaPredicted RBP6.36□□□□□ -1.39
HDAC3-209ENST00000486618 HAS2Q92819 552 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 TNFRSF14Q92956 283 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 ULK4Q96C45 1275 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 OR2A14Q96R47 310 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 TAAR6Q96RI8 345 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 SLC29A1Q99808 456 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 PKP2Q99959 881 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 PIMREGQ9BSJ6 248 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 G6PC3Q9BUM1 346 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 PARD6BQ9BYG5 372 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 TRIM31Q9BZY9 425 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 OR52A5Q9H2C5 316 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 COG4Q9H9E3 785 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 NECTIN3Q9NQS3 549 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 SLC22A11Q9NSA0 550 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 DNAJC11Q9NVH1 559 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 EURLQ9NYK6 297 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 CNIH4Q9P003 139 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 CTTNBP2NLQ9P2B4 639 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 CIDEBQ9UHD4 219 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 CRLS1Q9UJA2 301 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 DCHS2Q6V1P9 2916 aa6.36□□□□□ -1.39
HDAC3-209ENST00000486618 NIPBLQ6KC79 2804 aaeCLIP6.35□□□□□ -1.39
HDAC3-209ENST00000486618 HTR3EA5X5Y0 456 aa6.35□□□□□ -1.39
HDAC3-209ENST00000486618 GLOD5A6NK44 160 aa6.35□□□□□ -1.39
HDAC3-209ENST00000486618 MYO1GB0I1T2 1018 aa6.35□□□□□ -1.39
HDAC3-209ENST00000486618 ZNF487B1APH4 448 aa6.35□□□□□ -1.39
HDAC3-209ENST00000486618 SLC33A1O00400 549 aaPredicted RBP6.35□□□□□ -1.39
HDAC3-209ENST00000486618 GAPDHSO14556 408 aaPredicted RBP6.35□□□□□ -1.39
HDAC3-209ENST00000486618 MAP2K7O14733 419 aa6.35□□□□□ -1.39
HDAC3-209ENST00000486618 DSCR3O14972 297 aa6.35□□□□□ -1.39
HDAC3-209ENST00000486618 HCRTR1O43613 425 aa6.35□□□□□ -1.39
HDAC3-209ENST00000486618 GATCO43716 136 aaKnown RBP6.35□□□□□ -1.39
HDAC3-209ENST00000486618 SLC19A2O60779 497 aa6.35□□□□□ -1.39
HDAC3-209ENST00000486618 SMIM24O75264 130 aa6.35□□□□□ -1.39
HDAC3-209ENST00000486618 CLEC3AO75596 197 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms