RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 TRIM42Q8IWZ5 723 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 FAM109AQ8N4B1 249 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 TMEM251Q8N6I4 163 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 GOLGA6L1Q8N7Z2 621 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 OR6Y1Q8NGX8 325 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 TMBIM1Q969X1 311 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 CIDECQ96AQ7 238 aaPredicted RBP11.5□□□□□ -0.57
PTCD1-205ENST00000485746 TMCO6Q96DC7 493 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 ZBED6CLQ96FA7 236 aaPredicted RBP11.5□□□□□ -0.57
PTCD1-205ENST00000485746 FCRL1Q96LA6 429 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 C3orf30Q96M34 536 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 AMDHD1Q96NU7 426 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 PSMG3-AS1Q96PY0 264 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 SECISBP2Q96T21 854 aaKnown RBP11.5□□□□□ -0.57
PTCD1-205ENST00000485746 SH2D2AQ9NP31 389 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 ZFP64Q9NPA5 681 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 KLRF1Q9NZS2 232 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 CNOT11Q9UKZ1 510 aaKnown RBP11.5□□□□□ -0.57
PTCD1-205ENST00000485746 ZNF835Q9Y2P0 537 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 CHCHD2Q9Y6H1 151 aaPredicted RBP11.5□□□□□ -0.57
PTCD1-205ENST00000485746 CNTRLQ7Z7A1 2325 aa11.49□□□□□ -0.57
PTCD1-205ENST00000485746 A0A087WV62 115 aa11.49□□□□□ -0.57
PTCD1-205ENST00000485746 NPIPA2E9PIF3 369 aa11.49□□□□□ -0.57
PTCD1-205ENST00000485746 NPIPA3F8WFD2 350 aa11.49□□□□□ -0.57
PTCD1-205ENST00000485746 PLOD2O00469 737 aa11.49□□□□□ -0.57
PTCD1-205ENST00000485746 GLSO94925 669 aaPredicted RBP11.49□□□□□ -0.57
PTCD1-205ENST00000485746 SNX4O95219 450 aa11.49□□□□□ -0.57
PTCD1-205ENST00000485746 RNF224P0DH78 156 aa11.49□□□□□ -0.57
PTCD1-205ENST00000485746 GP1BBP13224 206 aa11.49□□□□□ -0.57
PTCD1-205ENST00000485746 GDF1P27539 372 aa11.49□□□□□ -0.57
PTCD1-205ENST00000485746 MAN2A2P49641 1150 aa11.49□□□□□ -0.57
PTCD1-205ENST00000485746 SMSP52788 366 aa11.49□□□□□ -0.57
PTCD1-205ENST00000485746 MRPS22P82650 360 aaKnown RBP11.49□□□□□ -0.57
PTCD1-205ENST00000485746 XKR7Q5GH72 579 aa11.49□□□□□ -0.57
PTCD1-205ENST00000485746 C6orf136Q5SQH8 315 aa11.49□□□□□ -0.57
PTCD1-205ENST00000485746 BICRALQ6AI39 1079 aa11.49□□□□□ -0.57
PTCD1-205ENST00000485746 Q6ZPB1 254 aaPredicted RBP11.49□□□□□ -0.57
PTCD1-205ENST00000485746 LARP4Q71RC2 724 aaKnown RBP eCLIP11.49□□□□□ -0.57
PTCD1-205ENST00000485746 CD163Q86VB7 1156 aa11.49□□□□□ -0.57
PTCD1-205ENST00000485746 FAM57AQ8TBR7 257 aa11.49□□□□□ -0.57
PTCD1-205ENST00000485746 MTERF3Q96E29 417 aa11.49□□□□□ -0.57
PTCD1-205ENST00000485746 ELP4Q96EB1 424 aa11.49□□□□□ -0.57
PTCD1-205ENST00000485746 RILPQ96NA2 401 aa11.49□□□□□ -0.57
PTCD1-205ENST00000485746 COL21A1Q96P44 957 aa11.49□□□□□ -0.57
PTCD1-205ENST00000485746 C3orf14Q9HBI5 128 aa11.49□□□□□ -0.57
PTCD1-205ENST00000485746 EQTNQ9NQ60 294 aa11.49□□□□□ -0.57
PTCD1-205ENST00000485746 ATAD3AQ9NVI7 634 aa11.49□□□□□ -0.57
PTCD1-205ENST00000485746 ALKBH4Q9NXW9 302 aa11.49□□□□□ -0.57
PTCD1-205ENST00000485746 PLEKHB1Q9UF11 243 aaPredicted RBP11.49□□□□□ -0.57
PTCD1-205ENST00000485746 MRTO4Q9UKD2 239 aaKnown RBP11.49□□□□□ -0.57
PTCD1-205ENST00000485746 ACAD8Q9UKU7 415 aa11.49□□□□□ -0.57
PTCD1-205ENST00000485746 C19orf53Q9UNZ5 99 aaPredicted RBP11.49□□□□□ -0.57
PTCD1-205ENST00000485746 EXO1Q9UQ84 846 aaKnown RBP11.49□□□□□ -0.57
PTCD1-205ENST00000485746 GPR55Q9Y2T6 319 aaPredicted RBP11.49□□□□□ -0.57
PTCD1-205ENST00000485746 HELZ2Q9BYK8 2649 aaKnown RBP11.49□□□□□ -0.57
PTCD1-205ENST00000485746 TENM4Q6N022 2769 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 TRGV5A0A0B4J1U4 118 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 ANKRD33BA6NCL7 494 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 UPK1AO00322 258 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 GNB5O14775 395 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 SCAMP2O15127 329 aaKnown RBP11.48□□□□□ -0.57
PTCD1-205ENST00000485746 CFLARO15519 480 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 TBX19O60806 448 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 ABCB7O75027 752 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 EFNA1P20827 205 aaPredicted RBP11.48□□□□□ -0.57
PTCD1-205ENST00000485746 CASP3P42574 277 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 RFX3P48380 749 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 TRPC1P48995 793 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 CORO7P57737 925 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 PSPHP78330 225 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 EMX2Q04743 252 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 BST1Q10588 318 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 FOXO1Q12778 655 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 EFR3AQ14156 821 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 DECR1Q16698 335 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 ZNF385BQ569K4 471 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 CPTPQ5TA50 214 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 AGBL2Q5U5Z8 902 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 CES4AQ5XG92 561 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 SLC30A6Q6NXT4 461 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 C3P1Q6ZMU1 363 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 TRILQ7L0X0 811 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 DOLPP1Q86YN1 238 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 OR7A2PQ8NGA2 310 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 OR1J4Q8NGS1 313 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 CEP70Q8NHQ1 597 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 CHMP6Q96FZ7 201 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 CCDC120Q96HB5 630 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 VSTM2LQ96N03 204 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 BTBD9Q96Q07 612 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 ADOQ96SZ5 270 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 OSBPL11Q9BXB4 747 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 ANGPTL4Q9BY76 406 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 ZDHHC11Q9H8X9 412 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 PROK2Q9HC23 129 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 Q9N2J8 555 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 PNPOQ9NVS9 261 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 NOP53Q9NZM5 478 aaKnown RBP11.48□□□□□ -0.57
PTCD1-205ENST00000485746 SNX8Q9Y5X2 465 aa11.48□□□□□ -0.57
PTCD1-205ENST00000485746 ESPL1Q14674 2120 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms