RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 FGFBP2Q9BYJ0 223 aa3.41□□□□□ -1.86
FN1-222ENST00000485567 GLT8D2Q9H1C3 349 aa3.41□□□□□ -1.86
FN1-222ENST00000485567 RIBC2Q9H4K1 309 aa3.41□□□□□ -1.86
FN1-222ENST00000485567 ROPN1Q9HAT0 212 aaPredicted RBP3.41□□□□□ -1.86
FN1-222ENST00000485567 FANCEQ9HB96 536 aa3.41□□□□□ -1.86
FN1-222ENST00000485567 SLC25A19Q9HC21 320 aa3.41□□□□□ -1.86
FN1-222ENST00000485567 VAT1LQ9HCJ6 419 aa3.41□□□□□ -1.86
FN1-222ENST00000485567 GDAP2Q9NXN4 497 aa3.41□□□□□ -1.86
FN1-222ENST00000485567 THYN1Q9P016 225 aa3.41□□□□□ -1.86
FN1-222ENST00000485567 NIP7Q9Y221 180 aaKnown RBP eCLIP3.41□□□□□ -1.862e-56■■□□□ 11.9
FN1-222ENST00000485567 KLHDC2Q9Y2U9 406 aa3.41□□□□□ -1.86
FN1-222ENST00000485567 SLC6A5Q9Y345 797 aa3.41□□□□□ -1.86
FN1-222ENST00000485567 BRD4O60885 1362 aaPredicted RBP3.4□□□□□ -1.86
FN1-222ENST00000485567 IGHV4-30-2A0A087WSY4 118 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 A0A087WZY1 265 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 TRBV5-4A0A0C4DH59 114 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 A0A1B0GWJ7 208 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 FAM230AA0A1W2PPH8 454 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 MEX3AA1L020 520 aaKnown RBP3.4□□□□□ -1.87
FN1-222ENST00000485567 MFSD2BA6NFX1 497 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 E2F3O00716 465 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 SPOPO43791 374 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 CACNG3O60359 315 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 ZNF254O75437 659 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 SCGB2A1O75556 95 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 STK17BO94768 372 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 NDUFA7O95182 113 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 IGKV3-20P01619 116 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 KRT6BP04259 564 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 S100A9P06702 114 aaKnown RBP3.4□□□□□ -1.87
FN1-222ENST00000485567 RHOXF2BP0C7M4 288 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 PSMA5P28066 241 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 PTPN6P29350 595 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 PRDX2P32119 198 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 SLC1A6P48664 564 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 KRT6CP48668 564 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 PRRX1P54821 245 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 MTTPP55157 894 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 CARD18P57730 90 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 HAND2P61296 217 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 CALCOCO2Q13137 446 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 KNOP1Q1ED39 458 aaKnown RBP3.4□□□□□ -1.87
FN1-222ENST00000485567 HKDC1Q2TB90 917 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 TAF3Q5VWG9 929 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 LIPKQ5VXJ0 399 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 GDPGP1Q6ZNW5 385 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 CARM1Q86X55 608 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 PSTKQ8IV42 348 aaKnown RBP3.4□□□□□ -1.87
FN1-222ENST00000485567 SLC22A9Q8IVM8 553 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 PHC2Q8IXK0 858 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 EIF1ADQ8N9N8 165 aaKnown RBP3.4□□□□□ -1.87
FN1-222ENST00000485567 ZNF248Q8NDW4 579 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 CHDHQ8NE62 594 aaPredicted RBP3.4□□□□□ -1.87
FN1-222ENST00000485567 PRSS33Q8NF86 280 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 ZNF397Q8NF99 534 aaPredicted RBP3.4□□□□□ -1.87
FN1-222ENST00000485567 OR4F5Q8NH21 305 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 C11orf45Q8TAV5 145 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 NRBF2Q96F24 287 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 ANKRD27Q96NW4 1050 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 OPRPNQ99935 248 aaPredicted RBP3.4□□□□□ -1.87
FN1-222ENST00000485567 C19orf43Q9BQ61 176 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 RHOXF2Q9BQY4 288 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 GPR61Q9BZJ8 451 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 TMEM117Q9H0C3 514 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 WDR41Q9HAD4 459 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 SNX6Q9UNH7 406 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 SYNJ2O15056 1496 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 ABCC4O15439 1325 aa3.4□□□□□ -1.87
FN1-222ENST00000485567 A0A0A6YYD4 124 aa3.39□□□□□ -1.87
FN1-222ENST00000485567 SERTM2A0A1B0GWG4 89 aa3.39□□□□□ -1.87
FN1-222ENST00000485567 GSAPA4D1B5 854 aa3.39□□□□□ -1.87
FN1-222ENST00000485567 FAM47DPA6NHR8 397 aa3.39□□□□□ -1.87
FN1-222ENST00000485567 ARHGEF33A8MVX0 844 aa3.39□□□□□ -1.87
FN1-222ENST00000485567 PRR23D1E9PI22 279 aaPredicted RBP3.39□□□□□ -1.87
FN1-222ENST00000485567 LGALS8O00214 317 aa3.39□□□□□ -1.87
FN1-222ENST00000485567 PDXKO00764 312 aa3.39□□□□□ -1.87
FN1-222ENST00000485567 CHADO15335 359 aa3.39□□□□□ -1.87
FN1-222ENST00000485567 ARHGEF9O43307 516 aa3.39□□□□□ -1.87
FN1-222ENST00000485567 VPS26AO75436 327 aa3.39□□□□□ -1.87
FN1-222ENST00000485567 FRAT2O75474 233 aaPredicted RBP3.39□□□□□ -1.87
FN1-222ENST00000485567 TOM1L1O75674 476 aa3.39□□□□□ -1.87
FN1-222ENST00000485567 IDH1O75874 414 aaKnown RBP3.39□□□□□ -1.87
FN1-222ENST00000485567 FLOT1O75955 427 aa3.39□□□□□ -1.87
FN1-222ENST00000485567 DUS4LO95620 317 aaKnown RBP3.39□□□□□ -1.87
FN1-222ENST00000485567 HPRP00739 348 aa3.39□□□□□ -1.87
FN1-222ENST00000485567 IGHG1P01857 330 aa3.39□□□□□ -1.87
FN1-222ENST00000485567 PCCBP05166 539 aa3.39□□□□□ -1.87
FN1-222ENST00000485567 GSTA1P08263 222 aa3.39□□□□□ -1.87
FN1-222ENST00000485567 PRR23D2P0DMB1 279 aaPredicted RBP3.39□□□□□ -1.87
FN1-222ENST00000485567 RRASP10301 218 aa3.39□□□□□ -1.87
FN1-222ENST00000485567 ANXA8P13928 327 aa3.39□□□□□ -1.87
FN1-222ENST00000485567 CD1DP15813 335 aa3.39□□□□□ -1.87
FN1-222ENST00000485567 UGT1A4P22310 534 aa3.39□□□□□ -1.87
FN1-222ENST00000485567 DPP4P27487 766 aa3.39□□□□□ -1.87
FN1-222ENST00000485567 EPS15P42566 896 aa3.39□□□□□ -1.87
FN1-222ENST00000485567 SGSHP51688 502 aa3.39□□□□□ -1.87
FN1-222ENST00000485567 RPS27AP62979 156 aaKnown RBP3.39□□□□□ -1.87
FN1-222ENST00000485567 HERVK_113P63132 956 aa3.39□□□□□ -1.87
FN1-222ENST00000485567 ERVK-8P63133 956 aa3.39□□□□□ -1.87
FN1-222ENST00000485567 FKBP3Q00688 224 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms