RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 UCK1Q9HA47 277 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 C3orf14Q9HBI5 128 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 BCL2L10Q9HD36 194 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 FSCN3Q9NQT6 498 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 PAK1IP1Q9NWT1 392 aaPredicted RBP8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 TMEM9Q9P0T7 183 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 NDRG4Q9ULP0 352 aaKnown RBP8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 SPTBN2O15020 2390 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 CENPVL1A0A0U1RR11 272 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 CLDN24A6NM45 220 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 CHST10O43529 356 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 FRS3O43559 492 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 XPNPEP2O43895 674 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 TPST2O60704 377 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 GPR75O95800 540 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 ATP1B1P05026 303 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 ITGA2P17301 1181 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 ZNF10P21506 573 aaPredicted RBP8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 PPM1FP49593 454 aaPredicted RBP8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 PDX1P52945 283 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 RPP38P78345 283 aaKnown RBP8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 NHLH1Q02575 133 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 MGAT2Q10469 447 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 NPRL3Q12980 569 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 SMN1Q16637 294 aaKnown RBP8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 DUSP5Q16690 384 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 RFX4Q33E94 735 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 C6orf141Q5SZD1 244 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 PRAMEF17Q5VTA0 474 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 ZNF770Q6IQ21 691 aaPredicted RBP8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 ARHGAP22Q7Z5H3 698 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 SLC35F3Q8IY50 421 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 NLGN4XQ8N0W4 816 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 METTL27Q8N6F8 245 aaPredicted RBP8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 ZNF655Q8N720 491 aaPredicted RBP8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 OR6T1Q8NGN1 323 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 FBLIM1Q8WUP2 373 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 PROX1Q92786 737 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 CDS1Q92903 461 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 DTNBP1Q96EV8 351 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 TCTN2Q96GX1 697 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 ZNF607Q96SK3 696 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 RHNO1Q9BSD3 238 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 HCN3Q9P1Z3 774 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 KIF17Q9P2E2 1029 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 SLC6A14Q9UN76 642 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 CLCA2Q9UQC9 943 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 GPR55Q9Y2T6 319 aaPredicted RBP8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 HCN4Q9Y3Q4 1203 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 CLDN16Q9Y5I7 305 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 N6AMT1Q9Y5N5 214 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 ORC6Q9Y5N6 252 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 PI4KAP42356 2102 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 TMEM131Q92545 1883 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 HRKO00198 91 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 SRPX2O60687 465 aaPredicted RBP8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 SERPINB7O75635 380 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 PDE9AO76083 593 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 GADD45GO95257 159 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 BMP10O95393 424 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 GASTP01350 101 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 PPP2R1BP30154 601 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 HLCSP50747 726 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 TUBA4AP68366 448 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 CDK5R2Q13319 367 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 EXOSC7Q15024 291 aaKnown RBP8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 PRICKLE4Q2TBC4 344 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 CCNJQ5T5M9 372 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 MLIPQ5VWP3 458 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 KLHL35Q6PF15 583 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 DEF8Q6ZN54 512 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 VRK2Q86Y07 508 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 C1orf210Q8IVY1 113 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 ADAMTS16Q8TE57 1224 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 PHF10Q8WUB8 498 aaKnown RBP8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 SLC9A6Q92581 669 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 MOAP1Q96BY2 351 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 ALPK1Q96QP1 1244 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 ACTRT3Q9BYD9 372 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 SPRTNQ9H040 489 aaPredicted RBP8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 EPB41L1Q9H4G0 881 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 ANKHQ9HCJ1 492 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 ADAP2Q9NPF8 381 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 CTPS2Q9NRF8 586 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 RASSF1Q9NS23 344 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 FBXO34Q9NWN3 711 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 MKLN1Q9UL63 735 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 A4GNTQ9UNA3 340 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 FAM32AQ9Y421 112 aaKnown RBP8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 CEPT1Q9Y6K0 416 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 DSPPQ9NZW4 1301 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 FAM186AA6NE01 2351 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 ASPMQ8IZT6 3477 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 A0A087WXM4 84 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 SMIM31A0A1B0GVY4 71 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 TMEM247A6NEH6 219 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 RHPN2P1A8MT19 583 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 PCDHGA12O60330 932 aa8.26□□□□□ -1.09
CDC42SE1-204ENST00000483763 NTN1O95631 604 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms