RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 TUBA8Q9NY65 449 aaPredicted RBP5.4□□□□□ -1.54
CSDE1-207ENST00000483407 WWOXQ9NZC7 414 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 MTRF1LQ9UGC7 380 aaKnown RBP5.4□□□□□ -1.54
CSDE1-207ENST00000483407 IKZF3Q9UKT9 509 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 CHMP2BQ9UQN3 213 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 PLEKHA6Q9Y2H5 1048 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 PPP2R2CQ9Y2T4 447 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 ATG4BQ9Y4P1 393 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.4□□□□□ -1.54
CSDE1-207ENST00000483407 MED13LQ71F56 2210 aa5.4□□□□□ -1.55
CSDE1-207ENST00000483407 SCN3AQ9NY46 2000 aa5.4□□□□□ -1.55
CSDE1-207ENST00000483407 IQANK1A0A1B0GTG1 560 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 NCF1BA6NI72 391 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-207ENST00000483407 A6NNC1 897 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 NCF1CA8MVU1 366 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-207ENST00000483407 AHRRA9YTQ3 701 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 SYT5O00445 386 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 PROM1O43490 865 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 LDB3O75112 727 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 STK16O75716 305 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 KNG1P01042 644 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 NCF1P14598 390 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-207ENST00000483407 RHCEP18577 417 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 BMP5P22003 454 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 HIST1H1TP22492 207 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-207ENST00000483407 CPN2P22792 545 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 SERPINB1P30740 379 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 TLX1P31314 330 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-207ENST00000483407 PIGAP37287 484 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 MSH2P43246 934 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 RPL21P46778 160 aaKnown RBP5.39□□□□□ -1.55
CSDE1-207ENST00000483407 ASCL1P50553 236 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 ARL4CP56559 192 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 TAS2R39P59534 338 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 PLIN5Q00G26 463 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 IRF8Q02556 426 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 MGAT2Q10469 447 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 ASPHQ12797 758 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 FOXD4Q12950 439 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-207ENST00000483407 FRG1Q14331 258 aaKnown RBP5.39□□□□□ -1.55
CSDE1-207ENST00000483407 TSNQ15631 228 aaKnown RBP5.39□□□□□ -1.55
CSDE1-207ENST00000483407 PDK4Q16654 411 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 AP5B1Q2VPB7 878 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 C18orf21Q32NC0 220 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-207ENST00000483407 ZNF791Q3KP31 576 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-207ENST00000483407 C3orf36Q3SXR2 165 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 FLYWCH1Q4VC44 716 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 TMEM35AQ53FP2 167 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 PIGGQ5H8A4 983 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 CDKL4Q5MAI5 379 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 STEAP4Q687X5 459 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 SULT1C3Q6IMI6 304 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 SLC29A4Q7RTT9 530 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 MAATS1Q7Z4T9 603 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 STK32CQ86UX6 486 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 ZC3HC1Q86WB0 502 aaKnown RBP5.39□□□□□ -1.55
CSDE1-207ENST00000483407 CDC20BQ86Y33 519 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 GPSM1Q86YR5 675 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 IGDCC3Q8IVU1 814 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 LRRC25Q8N386 305 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-207ENST00000483407 ZNF321PQ8N8H1 164 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 SNX31Q8N9S9 440 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 NEIL3Q8TAT5 605 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 PAQR8Q8TEZ7 354 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 ZNF721Q8TF20 911 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 MZB1Q8WU39 189 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 SLCO2A1Q92959 643 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 RNASE6Q93091 150 aaKnown RBP5.39□□□□□ -1.55
CSDE1-207ENST00000483407 UBE2E3Q969T4 207 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 MBD6Q96DN6 1003 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 SPACA9Q96E40 222 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-207ENST00000483407 SENP5Q96HI0 755 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-207ENST00000483407 JSRP1Q96MG2 331 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-207ENST00000483407 F2RL3Q96RI0 385 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 OSBPL9Q96SU4 736 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 KRT12Q99456 494 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 CENPKQ9BS16 269 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 DOHHQ9BU89 302 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 ADI1Q9BV57 179 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 CNPPD1Q9BV87 410 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 KRTAP4-11Q9BYQ6 195 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 DERL2Q9GZP9 239 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 RHOJQ9H4E5 214 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 ZNF703Q9H7S9 590 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-207ENST00000483407 ACKR4Q9NPB9 350 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 SEMA4BQ9NPR2 832 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-207ENST00000483407 MS4A12Q9NXJ0 267 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 CNIH4Q9P003 139 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 GTF3C1Q12789 2109 aa5.39□□□□□ -1.55
CSDE1-207ENST00000483407 TACC2O95359 2948 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 C15orf38-AP3S2A0A0A6YYH1 394 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 A0A1W2PR48 441 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 TUBAL3A6NHL2 446 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 CAPN14A8MX76 684 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 CES2O00748 559 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 OR10H2O60403 315 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 CCNT2O60583 730 aaKnown RBP5.38□□□□□ -1.55
CSDE1-207ENST00000483407 ZNF354AO60765 605 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-207ENST00000483407 CYP7B1O75881 506 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 SCELO95171 688 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms