RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 PRAMEF20Q5VT98 475 aa16.91■□□□□ 0.3
SMIM4-204ENST00000482728 NUP54Q7Z3B4 507 aa16.91■□□□□ 0.3
SMIM4-204ENST00000482728 OMA1Q96E52 524 aa16.91■□□□□ 0.3
SMIM4-204ENST00000482728 SECISBP2Q96T21 854 aaKnown RBP16.91■□□□□ 0.3
SMIM4-204ENST00000482728 TTTY12Q9BZ98 90 aa16.91■□□□□ 0.3
SMIM4-204ENST00000482728 DEFB127Q9H1M4 99 aa16.91■□□□□ 0.3
SMIM4-204ENST00000482728 IL1RL2Q9HB29 575 aa16.91■□□□□ 0.3
SMIM4-204ENST00000482728 FOLH1BQ9HBA9 442 aa16.91■□□□□ 0.3
SMIM4-204ENST00000482728 ACSS1Q9NUB1 689 aaPredicted RBP16.91■□□□□ 0.3
SMIM4-204ENST00000482728 ATAD3AQ9NVI7 634 aa16.91■□□□□ 0.3
SMIM4-204ENST00000482728 TUBA8Q9NY65 449 aaPredicted RBP16.91■□□□□ 0.3
SMIM4-204ENST00000482728 ATP6V1HQ9UI12 483 aa16.91■□□□□ 0.3
SMIM4-204ENST00000482728 BOKQ9UMX3 212 aaPredicted RBP16.91■□□□□ 0.3
SMIM4-204ENST00000482728 CHCHD2Q9Y6H1 151 aaPredicted RBP16.91■□□□□ 0.3
SMIM4-204ENST00000482728 RELNP78509 3460 aa16.91■□□□□ 0.3
SMIM4-204ENST00000482728 TRGV8A0A0C4DH27 118 aa16.9■□□□□ 0.3
SMIM4-204ENST00000482728 A0A1B0GUH1 482 aa16.9■□□□□ 0.3
SMIM4-204ENST00000482728 FAM166BA8MTA8 275 aa16.9■□□□□ 0.3
SMIM4-204ENST00000482728 SCAMP2O15127 329 aaKnown RBP16.9■□□□□ 0.3
SMIM4-204ENST00000482728 TO15178 435 aa16.9■□□□□ 0.3
SMIM4-204ENST00000482728 CDC40O60508 579 aaKnown RBP eCLIP16.9■□□□□ 0.3
SMIM4-204ENST00000482728 SNNO75324 88 aaPredicted RBP16.9■□□□□ 0.3
SMIM4-204ENST00000482728 NME6O75414 186 aaPredicted RBP16.9■□□□□ 0.3
SMIM4-204ENST00000482728 REM1O75628 298 aa16.9■□□□□ 0.3
SMIM4-204ENST00000482728 ABCB1P08183 1280 aaPredicted RBP16.9■□□□□ 0.3
SMIM4-204ENST00000482728 STSP08842 583 aa16.9■□□□□ 0.3
SMIM4-204ENST00000482728 G6PDP11413 515 aa16.9■□□□□ 0.3
SMIM4-204ENST00000482728 KRT20P35900 424 aa16.9■□□□□ 0.3
SMIM4-204ENST00000482728 PSPHP78330 225 aa16.9■□□□□ 0.3
SMIM4-204ENST00000482728 ZNF155Q12901 538 aaPredicted RBP16.9■□□□□ 0.3
SMIM4-204ENST00000482728 ZNHIT3Q15649 155 aaPredicted RBP16.9■□□□□ 0.3
SMIM4-204ENST00000482728 C4orf17Q53FE4 359 aa16.9■□□□□ 0.3
SMIM4-204ENST00000482728 ZNF385BQ569K4 471 aa16.9■□□□□ 0.3
SMIM4-204ENST00000482728 PAOXQ6QHF9 649 aa16.9■□□□□ 0.3
SMIM4-204ENST00000482728 SLC44A2Q8IWA5 706 aaPredicted RBP16.9■□□□□ 0.3
SMIM4-204ENST00000482728 SLC34A3Q8N130 599 aa16.9■□□□□ 0.3
SMIM4-204ENST00000482728 OR7A2PQ8NGA2 310 aa16.9■□□□□ 0.3
SMIM4-204ENST00000482728 SPPL2AQ8TCT8 520 aa16.9■□□□□ 0.3
SMIM4-204ENST00000482728 JSRP1Q96MG2 331 aaPredicted RBP16.9■□□□□ 0.3
SMIM4-204ENST00000482728 VSTM2LQ96N03 204 aa16.9■□□□□ 0.3
SMIM4-204ENST00000482728 BTBD9Q96Q07 612 aa16.9■□□□□ 0.3
SMIM4-204ENST00000482728 DOHHQ9BU89 302 aa16.9■□□□□ 0.3
SMIM4-204ENST00000482728 CNOT11Q9UKZ1 510 aaKnown RBP16.9■□□□□ 0.3
SMIM4-204ENST00000482728 MAPRE3Q9UPY8 281 aa16.9■□□□□ 0.3
SMIM4-204ENST00000482728 OR10H1Q9Y4A9 318 aa16.9■□□□□ 0.3
SMIM4-204ENST00000482728 DNAJC13O75165 2243 aa16.9■□□□□ 0.3
SMIM4-204ENST00000482728 ZNF407Q9C0G0 2248 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 PTPN13Q12923 2485 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 ANKRD33BA6NCL7 494 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 TRPC5OSA6NMA1 111 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 HMGB1P1B2RPK0 211 aaPredicted RBP16.89■□□□□ 0.29
SMIM4-204ENST00000482728 SLCO1B7G3V0H7 640 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 UPK1AO00322 258 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 HDAC3O15379 428 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 SLC19A2O60779 497 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 PDE9AO76083 593 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 CT45A8P0DMV1 189 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 CT45A9P0DMV2 189 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 KITP10721 976 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 LAMP1P11279 417 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 ABOP16442 354 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 LBPP18428 481 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 PER3P56645 1201 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 CORO7P57737 925 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 FOXO1Q12778 655 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 TTMPQ5BVD1 217 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 CT45A2Q5DJT8 189 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 TMEM198Q66K66 360 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 PACS2Q86VP3 889 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 SPPL2CQ8IUH8 684 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 OR2L13Q8N349 312 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 KRTCAP2Q8N6L1 136 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 NATD1Q8N6N6 113 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 OR52N2Q8NGI0 321 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 CEP70Q8NHQ1 597 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 SSC4DQ8WTU2 575 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 ZNF75CPQ92670 426 aaPredicted RBP16.89■□□□□ 0.29
SMIM4-204ENST00000482728 TMBIM1Q969X1 311 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 SH3GL2Q99962 352 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 MEAF6Q9HAF1 191 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 C3orf14Q9HBI5 128 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 ZFP64Q9NPA5 681 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 ASIC5Q9NY37 505 aa16.89■□□□□ 0.29
SMIM4-204ENST00000482728 ERRFI1Q9UJM3 462 aaPredicted RBP16.89■□□□□ 0.29
SMIM4-204ENST00000482728 USP9YO00507 2555 aaPredicted RBP16.88■□□□□ 0.29
SMIM4-204ENST00000482728 A0A1W2PRB8 838 aa16.88■□□□□ 0.29
SMIM4-204ENST00000482728 GLSO94925 669 aaPredicted RBP16.88■□□□□ 0.29
SMIM4-204ENST00000482728 SNX4O95219 450 aa16.88■□□□□ 0.29
SMIM4-204ENST00000482728 IFI6P09912 130 aa16.88■□□□□ 0.29
SMIM4-204ENST00000482728 EFNA1P20827 205 aaPredicted RBP16.88■□□□□ 0.29
SMIM4-204ENST00000482728 MASP1P48740 699 aa16.88■□□□□ 0.29
SMIM4-204ENST00000482728 PRKAG1P54619 331 aa16.88■□□□□ 0.29
SMIM4-204ENST00000482728 CLDN8P56748 225 aa16.88■□□□□ 0.29
SMIM4-204ENST00000482728 SLC10A1Q14973 349 aa16.88■□□□□ 0.29
SMIM4-204ENST00000482728 LSM12Q3MHD2 195 aaKnown RBP16.88■□□□□ 0.29
SMIM4-204ENST00000482728 CMPK2Q5EBM0 449 aa16.88■□□□□ 0.29
SMIM4-204ENST00000482728 C1QL3Q5VWW1 255 aa16.88■□□□□ 0.29
SMIM4-204ENST00000482728 SZRD1Q7Z422 152 aa16.88■□□□□ 0.29
SMIM4-204ENST00000482728 FAM109AQ8N4B1 249 aa16.88■□□□□ 0.29
SMIM4-204ENST00000482728 TMEM251Q8N6I4 163 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms