RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 KRTCAP2Q8N6L1 136 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 TCTN2Q96GX1 697 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 PHF7Q9BWX1 381 aaPredicted RBP8.99□□□□□ -0.97
GARNL3-216ENST00000481242 SLC22A4Q9H015 551 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 DMRT3Q9NQL9 472 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 MARCH5Q9NX47 278 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 GIMAP2Q9UG22 337 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 RNASET2O00584 256 aaKnown RBP8.99□□□□□ -0.97
GARNL3-216ENST00000481242 RPS17P08708 135 aaKnown RBP8.99□□□□□ -0.97
GARNL3-216ENST00000481242 PRKCAP17252 672 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 ERVPABLB-1P60509 514 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 PSPHP78330 225 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 PRDX1Q06830 199 aaKnown RBP8.99□□□□□ -0.97
GARNL3-216ENST00000481242 CRYZQ08257 329 aaKnown RBP8.99□□□□□ -0.97
GARNL3-216ENST00000481242 ALG10BQ5I7T1 473 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 MS4A15Q8N5U1 240 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 OR8H1Q8NGG4 311 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 OR14L1PQ8NHC6 308 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 SNIP1Q8TAD8 396 aaKnown RBP8.99□□□□□ -0.97
GARNL3-216ENST00000481242 MYNNQ9NPC7 610 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 SDR39U1Q9NRG7 319 aaPredicted RBP8.99□□□□□ -0.97
GARNL3-216ENST00000481242 LRIT1Q9P2V4 623 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 SCP2D1Q9UJQ7 156 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 POU2F3Q9UKI9 436 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 HS3ST3A1Q9Y663 406 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 A6NIZ1 184 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 L7N2F9 121 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 HOXC11O43248 304 aaPredicted RBP8.98□□□□□ -0.97
GARNL3-216ENST00000481242 AQP9O43315 295 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 SOX14O95416 240 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 CHRNB1P11230 501 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 GLULP15104 373 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 ZNF43P17038 809 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 AZGP1P25311 298 aaKnown RBP8.98□□□□□ -0.97
GARNL3-216ENST00000481242 THBS2P35442 1172 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 EIF1AXP47813 144 aaKnown RBP8.98□□□□□ -0.97
GARNL3-216ENST00000481242 ETV1P50549 477 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 RAP1BP61224 184 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 HERV-K104P61576 105 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 RAP1AP62834 184 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 VAMP2P63027 116 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 ARF5P84085 180 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 ADAM15Q13444 863 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 PPP1R3AQ16821 1122 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 CCDC58Q4VC31 144 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 RNASE12Q5GAN4 147 aaKnown RBP8.98□□□□□ -0.97
GARNL3-216ENST00000481242 TANGO2Q6ICL3 276 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 PYHIN1Q6K0P9 492 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 ZNF773Q6PK81 442 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 ZBTB46Q86UZ6 589 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 TOMM5Q8N4H5 51 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 MARVELD2Q8N4S9 558 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 THAP3Q8WTV1 239 aaPredicted RBP8.98□□□□□ -0.97
GARNL3-216ENST00000481242 ELSPBP1Q96BH3 223 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 BORCS8Q96FH0 119 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 MTG2Q9H4K7 406 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 RP1L1Q8IWN7 2480 aaPredicted RBP8.98□□□□□ -0.97
GARNL3-216ENST00000481242 ZFAND5O76080 213 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 RETP07949 1114 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 AOAHP28039 575 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 CRISP1P54107 249 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 SH3BP2P78314 561 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 SFT2D3Q587I9 215 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 TMEM240Q5SV17 173 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 PAQR9Q6ZVX9 377 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 SHFQ7M4L6 423 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 ZNF367Q7RTV3 350 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 GATSQ8NAP1 163 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 OR51A7Q8NH64 312 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 JPH3Q8WXH2 748 aaPredicted RBP8.98□□□□□ -0.97
GARNL3-216ENST00000481242 TMEM19Q96HH6 336 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 TMEM41AQ96HV5 264 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 TOR3AQ9H497 397 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 RAB9BQ9NP90 201 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 IGSF5Q9NSI5 407 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 LHX3Q9UBR4 397 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 MCTS1Q9ULC4 181 aaKnown RBP8.98□□□□□ -0.97
GARNL3-216ENST00000481242 ENPP4Q9Y6X5 453 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 NHSL1Q5SYE7 1610 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 BTAF1O14981 1849 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 ANHXE9PGG2 379 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 C11orf98E9PRG8 122 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 TNFRSF10CO14798 259 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 HTRA2O43464 458 aaPredicted RBP8.98□□□□□ -0.97
GARNL3-216ENST00000481242 RAD51DO75771 328 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 SLC2A2P11168 524 aaPredicted RBP8.98□□□□□ -0.97
GARNL3-216ENST00000481242 GGT2P36268 569 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 RIDAP52758 137 aaKnown RBP8.98□□□□□ -0.97
GARNL3-216ENST00000481242 RACK1P63244 317 aaKnown RBP8.98□□□□□ -0.97
GARNL3-216ENST00000481242 GALK2Q01415 458 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 SLC35F1Q5T1Q4 408 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 ADAMTSL4Q6UY14 1074 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 TP53INP2Q8IXH6 220 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 ACBD7Q8N6N7 88 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 OR2A12Q8NGT7 310 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 SFXN5Q8TD22 340 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 SFXN2Q96NB2 322 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 KATNBL1Q9H079 304 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 MTMR10Q9NXD2 777 aa8.98□□□□□ -0.97
GARNL3-216ENST00000481242 C14orf166Q9Y224 244 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms