RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 TMEM237Q96Q45 408 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 MANSC1Q9H8J5 431 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 MAT2BQ9NZL9 334 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 TMEM216Q9P0N5 145 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 VPS29Q9UBQ0 182 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 Q9UFV3 132 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 BCAP29Q9UHQ4 241 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 MID2Q9UJV3 735 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 ZNF225Q9UK10 706 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 CFL2Q9Y281 166 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 DTX4Q9Y2E6 619 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 PCDHGB3Q9Y5G1 929 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 NCKAP5O14513 1909 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 HCFC1P51610 2035 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 MANBAO00462 879 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 DLX3O60479 287 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 TRAPPC6AO75865 159 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 SNX4O95219 450 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 ESRRBO95718 433 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 PROCP04070 461 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 BPGMP07738 259 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 S1PR1P21453 382 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 ATP5F1P24539 256 aaPredicted RBP13.13□□□□□ -0.31
ATG4B-218ENST00000479554 ABCD3P28288 659 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 HMOX2P30519 316 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 ADH7P40394 386 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 TRA2BP62995 288 aaKnown RBP13.13□□□□□ -0.31
ATG4B-218ENST00000479554 MAP4K2Q12851 820 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 CSTF3Q12996 717 aaKnown RBP13.13□□□□□ -0.31
ATG4B-218ENST00000479554 DUSP8Q13202 625 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 EXOSC7Q15024 291 aaKnown RBP13.13□□□□□ -0.31
ATG4B-218ENST00000479554 UNC50Q53HI1 259 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 RIPPLY2Q5TAB7 128 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 ATG16L1Q676U5 607 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 FAM111BQ6SJ93 734 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 PIGWQ7Z7B1 504 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 CDH24Q86UP0 819 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 PACS2Q86VP3 889 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 NUDCD3Q8IVD9 361 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 CLYBLQ8N0X4 340 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 TM4SF18Q96CE8 201 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 ZNF382Q96SR6 550 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 ITPAQ9BY32 194 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 ANGPTL4Q9BY76 406 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 NXF5Q9H1B4 397 aaKnown RBP13.13□□□□□ -0.31
ATG4B-218ENST00000479554 PFDN4Q9NQP4 134 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 FGFR1OP2Q9NVK5 253 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 ITGB1BP2Q9UKP3 347 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 EMCNQ9ULC0 261 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 STK38LQ9Y2H1 464 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 ZNF780BQ9Y6R6 833 aa13.13□□□□□ -0.31
ATG4B-218ENST00000479554 ANKRD17O75179 2603 aaKnown RBP13.13□□□□□ -0.31
ATG4B-218ENST00000479554 ERICH4A6NGS2 130 aa13.12□□□□□ -0.31
ATG4B-218ENST00000479554 EBAG9O00559 213 aa13.12□□□□□ -0.31
ATG4B-218ENST00000479554 KLF11O14901 512 aa13.12□□□□□ -0.31
ATG4B-218ENST00000479554 PCDH7O60245 1069 aa13.12□□□□□ -0.31
ATG4B-218ENST00000479554 PPM1BO75688 479 aa13.12□□□□□ -0.31
ATG4B-218ENST00000479554 CASP3P42574 277 aa13.12□□□□□ -0.31
ATG4B-218ENST00000479554 DUSP2Q05923 314 aa13.12□□□□□ -0.31
ATG4B-218ENST00000479554 PLCXD2Q0VAA5 305 aa13.12□□□□□ -0.31
ATG4B-218ENST00000479554 MGAT2Q10469 447 aa13.12□□□□□ -0.31
ATG4B-218ENST00000479554 SLC25A35Q3KQZ1 300 aa13.12□□□□□ -0.31
ATG4B-218ENST00000479554 WDR53Q7Z5U6 358 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-218ENST00000479554 SLC22A9Q8IVM8 553 aa13.12□□□□□ -0.31
ATG4B-218ENST00000479554 ADCY4Q8NFM4 1077 aa13.12□□□□□ -0.31
ATG4B-218ENST00000479554 OR52R1Q8NGF1 315 aa13.12□□□□□ -0.31
ATG4B-218ENST00000479554 METTL6Q8TCB7 284 aa13.12□□□□□ -0.31
ATG4B-218ENST00000479554 CNRIP1Q96F85 164 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-218ENST00000479554 TMEM41AQ96HV5 264 aa13.12□□□□□ -0.31
ATG4B-218ENST00000479554 GNRHR2Q96P88 292 aa13.12□□□□□ -0.31
ATG4B-218ENST00000479554 ZNF559Q9BR84 538 aa13.12□□□□□ -0.31
ATG4B-218ENST00000479554 METTL7AQ9H8H3 244 aa13.12□□□□□ -0.31
ATG4B-218ENST00000479554 SLC24A3Q9HC58 644 aa13.12□□□□□ -0.31
ATG4B-218ENST00000479554 KCNN3Q9UGI6 736 aa13.12□□□□□ -0.31
ATG4B-218ENST00000479554 ZNF639Q9UID6 485 aa13.12□□□□□ -0.31
ATG4B-218ENST00000479554 MCM8Q9UJA3 840 aa13.12□□□□□ -0.31
ATG4B-218ENST00000479554 C15orf41Q9Y2V0 281 aa13.12□□□□□ -0.31
ATG4B-218ENST00000479554 EXPH5Q8NEV8 1989 aa13.12□□□□□ -0.31
ATG4B-218ENST00000479554 GNG14A0A1W2PPG7 69 aa13.11□□□□□ -0.31
ATG4B-218ENST00000479554 ACOX3O15254 700 aa13.11□□□□□ -0.31
ATG4B-218ENST00000479554 EDF1O60869 148 aaKnown RBP13.11□□□□□ -0.31
ATG4B-218ENST00000479554 ULK1O75385 1050 aa13.11□□□□□ -0.31
ATG4B-218ENST00000479554 HPNP05981 417 aa13.11□□□□□ -0.31
ATG4B-218ENST00000479554 ABCB1P08183 1280 aaPredicted RBP13.11□□□□□ -0.31
ATG4B-218ENST00000479554 IL3P08700 152 aa13.11□□□□□ -0.31
ATG4B-218ENST00000479554 NAGAP17050 411 aa13.11□□□□□ -0.31
ATG4B-218ENST00000479554 IMPDH1P20839 514 aa13.11□□□□□ -0.31
ATG4B-218ENST00000479554 BGNP21810 368 aa13.11□□□□□ -0.31
ATG4B-218ENST00000479554 CDK9P50750 372 aaKnown RBP13.11□□□□□ -0.31
ATG4B-218ENST00000479554 DCAF7P61962 342 aa13.11□□□□□ -0.31
ATG4B-218ENST00000479554 CRYZQ08257 329 aaKnown RBP13.11□□□□□ -0.31
ATG4B-218ENST00000479554 DMTNQ08495 405 aa13.11□□□□□ -0.31
ATG4B-218ENST00000479554 LCP2Q13094 533 aa13.11□□□□□ -0.31
ATG4B-218ENST00000479554 MYBPHQ13203 477 aa13.11□□□□□ -0.31
ATG4B-218ENST00000479554 TOMM20Q15388 145 aa13.11□□□□□ -0.31
ATG4B-218ENST00000479554 LTB4RQ15722 352 aa13.11□□□□□ -0.31
ATG4B-218ENST00000479554 FNDC7Q5VTL7 733 aa13.11□□□□□ -0.31
ATG4B-218ENST00000479554 FAM180BQ6P0A1 224 aa13.11□□□□□ -0.31
ATG4B-218ENST00000479554 TMEM200AQ86VY9 491 aa13.11□□□□□ -0.31
ATG4B-218ENST00000479554 LIX1LQ8IVB5 337 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms