RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 TP63Q9H3D4 680 aaPredicted RBP13.58□□□□□ -0.24
COL20A1-206ENST00000479501 TBX21Q9UL17 535 aa13.58□□□□□ -0.24
COL20A1-206ENST00000479501 SCML1Q9UN30 329 aa13.58□□□□□ -0.24
COL20A1-206ENST00000479501 FAM155AB1AL88 458 aaPredicted RBP13.58□□□□□ -0.24
COL20A1-206ENST00000479501 M0R3H8 397 aa13.58□□□□□ -0.24
COL20A1-206ENST00000479501 HNRNPA2B1P22626 353 aaKnown RBP13.58□□□□□ -0.24
COL20A1-206ENST00000479501 TCEA1P23193 301 aaKnown RBP13.58□□□□□ -0.24
COL20A1-206ENST00000479501 PSMB5P28074 263 aa13.58□□□□□ -0.24
COL20A1-206ENST00000479501 RAB2AP61019 212 aa13.58□□□□□ -0.24
COL20A1-206ENST00000479501 UBE2UQ5VVX9 321 aa13.58□□□□□ -0.24
COL20A1-206ENST00000479501 LHFPL3Q86UP9 236 aa13.58□□□□□ -0.24
COL20A1-206ENST00000479501 METTL4Q8N3J2 472 aa13.58□□□□□ -0.24
COL20A1-206ENST00000479501 ACOT4Q8N9L9 421 aa13.58□□□□□ -0.24
COL20A1-206ENST00000479501 ZNF740Q8NDX6 193 aa13.58□□□□□ -0.24
COL20A1-206ENST00000479501 HCAR2Q8TDS4 363 aa13.58□□□□□ -0.24
COL20A1-206ENST00000479501 IL21Q9HBE4 155 aa13.58□□□□□ -0.24
COL20A1-206ENST00000479501 CUEDC1Q9NWM3 386 aaPredicted RBP13.58□□□□□ -0.24
COL20A1-206ENST00000479501 METTL21EPA6NDL7 271 aa13.58□□□□□ -0.24
COL20A1-206ENST00000479501 ANTXRLA6NF34 631 aa13.58□□□□□ -0.24
COL20A1-206ENST00000479501 ANXA3P12429 323 aa13.58□□□□□ -0.24
COL20A1-206ENST00000479501 PRDX1Q06830 199 aaKnown RBP13.58□□□□□ -0.24
COL20A1-206ENST00000479501 CCSAPQ6IQ19 270 aaPredicted RBP13.58□□□□□ -0.24
COL20A1-206ENST00000479501 ATCAYQ86WG3 371 aa13.58□□□□□ -0.24
COL20A1-206ENST00000479501 OR2L5Q8NG80 312 aa13.58□□□□□ -0.24
COL20A1-206ENST00000479501 CCDC107Q8WV48 283 aa13.58□□□□□ -0.24
COL20A1-206ENST00000479501 NUDT8Q8WV74 236 aa13.58□□□□□ -0.24
COL20A1-206ENST00000479501 ZNF486Q96H40 463 aaPredicted RBP13.58□□□□□ -0.24
COL20A1-206ENST00000479501 MACROD1Q9BQ69 325 aa13.58□□□□□ -0.24
COL20A1-206ENST00000479501 PITHD1Q9GZP4 211 aaPredicted RBP13.58□□□□□ -0.24
COL20A1-206ENST00000479501 CST11Q9H112 138 aa13.58□□□□□ -0.24
COL20A1-206ENST00000479501 EXTL2Q9UBQ6 330 aa13.58□□□□□ -0.24
COL20A1-206ENST00000479501 A0A1W2PRQ8 180 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 A8MU76 341 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 JRKO75564 520 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 HMGN2P05204 90 aaKnown RBP13.57□□□□□ -0.24
COL20A1-206ENST00000479501 CERS1P27544 350 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 P2RY2P41231 377 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 RBM34P42696 430 aaKnown RBP13.57□□□□□ -0.24
COL20A1-206ENST00000479501 MASP1P48740 699 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 ARHGDIBP52566 201 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 PFN3P60673 137 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 ELOCQ15369 112 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 ULK3Q6PHR2 472 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 DLEU7Q6UYE1 221 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 NUP54Q7Z3B4 507 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 OR52E1Q8NGJ3 308 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 SECISBP2Q96T21 854 aaKnown RBP13.57□□□□□ -0.24
COL20A1-206ENST00000479501 PPIEQ9UNP9 301 aaKnown RBP13.57□□□□□ -0.24
COL20A1-206ENST00000479501 C5orf51A6NDU8 294 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 KLK8O60259 260 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 FZD6O60353 706 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 TACSTD2P09758 323 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 RNH1P13489 461 aaKnown RBP13.57□□□□□ -0.24
COL20A1-206ENST00000479501 DNASE1P24855 282 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 DNASE1L1P49184 302 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 IRF4Q15306 451 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 CCSMST1Q4G0I0 132 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 PRAMEF17Q5VTA0 474 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 ARMC10Q8N2F6 343 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 NKD1Q969G9 470 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 SH3YL1Q96HL8 342 aaPredicted RBP13.57□□□□□ -0.24
COL20A1-206ENST00000479501 NUDT15Q9NV35 164 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 ALG5Q9Y673 324 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 FOCADQ5VW36 1801 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 SOBPA7XYQ1 873 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 TOXO94900 526 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 ATE1O95260 518 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 PRH1P02810 166 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 ZNF823P16415 610 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 JUNDP17535 347 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 NRG3P56975 720 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 EIF5AP63241 154 aaKnown RBP13.57□□□□□ -0.24
COL20A1-206ENST00000479501 TSC22D1Q15714 1073 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 FIGNL1Q6PIW4 674 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 ZNF550Q7Z398 422 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 PLPP6Q8IY26 295 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 FANK1Q8TC84 345 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 ACTRT3Q9BYD9 372 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 TREM1Q9NP99 234 aa13.57□□□□□ -0.24
COL20A1-206ENST00000479501 APOBEC3BQ9UH17 382 aaKnown RBP13.57□□□□□ -0.24
COL20A1-206ENST00000479501 GREB1LQ9C091 1923 aaPredicted RBP13.57□□□□□ -0.24
COL20A1-206ENST00000479501 CPED1A4D0V7 1026 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 GRXCR1A8MXD5 290 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 BLOC1S5-TXNDC5H3BN57 136 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 PROM1O43490 865 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 SEMA4FO95754 770 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 F8A1P23610 371 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 CCKBRP32239 447 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 CLDN2P57739 230 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 VLDLRP98155 873 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 HSD17B12Q53GQ0 312 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 GTF2IRD2BQ6EKJ0 949 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 ZNF782Q6ZMW2 699 aaPredicted RBP13.56□□□□□ -0.24
COL20A1-206ENST00000479501 SLC29A4Q7RTT9 530 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 GTF2IRD2Q86UP8 949 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 GID4Q8IVV7 300 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 METTL25Q8N6Q8 603 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 ZNF676Q8N7Q3 588 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 PSD4Q8NDX1 1056 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 PROKR2Q8NFJ6 384 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms