RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 VGLL3A8MV65 326 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 SLITRK3O94933 977 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 CELF2O95319 508 aaKnown RBP5.19□□□□□ -1.58
USF3-202ENST00000478658 JCHAINP01591 159 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 ZBTB48P10074 688 aaPredicted RBP5.19□□□□□ -1.58
USF3-202ENST00000478658 MYF6P23409 242 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 ELK4P28324 431 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 CD6P30203 668 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 RPL38P63173 70 aaKnown RBP5.19□□□□□ -1.58
USF3-202ENST00000478658 ZXDBP98169 803 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 IL10RAQ13651 578 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 NSDHLQ15738 373 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 ANKRD22Q5VYY1 191 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 OR10K2Q6IF99 312 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 BRAT1Q6PJG6 821 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 UBE3DQ7Z6J8 389 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 SERINC5Q86VE9 423 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 ZSWIM9Q86XI8 627 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 PLXDC1Q8IUK5 500 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 ARFGAP1Q8N6T3 406 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 IRGQQ8WZA9 623 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 FBXL20Q96IG2 436 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 NECTIN4Q96NY8 510 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 SERINC2Q96SA4 455 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 NIPSNAP3BQ9BS92 247 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 GNB4Q9HAV0 340 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 ZNF586Q9NXT0 402 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 CMAHPQ9Y471 501 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 EDDM13A0A1B0GTR0 161 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 SLC22A20A6NK97 555 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 MEIS3P2A8K0S8 358 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 ZNF785A8K8V0 405 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 B4DXG7 233 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 G3V3Y1 287 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 APOC4-APOC2K7ER74 178 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 CAPN5O15484 640 aaPredicted RBP5.19□□□□□ -1.58
USF3-202ENST00000478658 SYNGR2O43760 224 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 GPRIN2O60269 458 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 RNASEH2AO75792 299 aaKnown RBP5.19□□□□□ -1.58
USF3-202ENST00000478658 SIX6O95475 246 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 GOT2P00505 430 aaKnown RBP5.19□□□□□ -1.58
USF3-202ENST00000478658 APOC2P02655 101 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 ICAM1P05362 532 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 UBBP0CG47 229 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 ACP5P13686 325 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 CDX1P47902 265 aaPredicted RBP5.19□□□□□ -1.58
USF3-202ENST00000478658 EFNA3P52797 238 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 CARD18P57730 90 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 CORO7P57737 925 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 GABARAPL2P60520 117 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 RPS27AP62979 156 aaKnown RBP5.19□□□□□ -1.58
USF3-202ENST00000478658 UBA52P62987 128 aaKnown RBP5.19□□□□□ -1.58
USF3-202ENST00000478658 ZNF266Q14584 549 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 ARL13AQ5H913 290 aaPredicted RBP5.19□□□□□ -1.58
USF3-202ENST00000478658 PXDC1Q5TGL8 231 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 ETFRF1Q6IPR1 90 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 TEX261Q6UWH6 196 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 DTWD1Q8N5C7 304 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 CPSF7Q8N684 471 aaKnown RBP5.19□□□□□ -1.58
USF3-202ENST00000478658 FAXDC2Q96IV6 333 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 BTN2A3PQ96KV6 586 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 ZNF317Q96PQ6 595 aaPredicted RBP5.19□□□□□ -1.58
USF3-202ENST00000478658 EDEM2Q9BV94 578 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 BOKQ9UMX3 212 aaPredicted RBP5.19□□□□□ -1.58
USF3-202ENST00000478658 U3KQ87 197 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 HEG1Q9ULI3 1381 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 A0A1W2PRB8 838 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 HSPB2A8KAH6 182 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 GPR89AB7ZAQ6 455 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 B4GAT1O43505 415 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 COX6CP09669 75 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 GPR89BP0CG08 455 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 CTSAP10619 480 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 ST6GAL1P15907 406 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 PON1P27169 355 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 GYG1P46976 350 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 GATMP50440 423 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 LCN6P62502 163 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 HSPB2Q16082 182 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 OR5M10Q6IEU7 315 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 Q6ZRG5 221 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 TMED4Q7Z7H5 227 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 KLHDC8BQ8IXV7 354 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 OXER1Q8TDS5 423 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 NUDT16L1Q9BRJ7 211 aaKnown RBP5.19□□□□□ -1.58
USF3-202ENST00000478658 SEMA4AQ9H3S1 761 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 RXFP3Q9NSD7 469 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 TRPM1Q7Z4N2 1603 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 FAM237AA0A1B0GTK4 181 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 FOXN3O00409 490 aaPredicted RBP5.19□□□□□ -1.58
USF3-202ENST00000478658 GADD45GO95257 159 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 PLEKP08567 350 aaPredicted RBP5.19□□□□□ -1.58
USF3-202ENST00000478658 CDK4P11802 303 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 ABCD3P28288 659 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 UBE2G1P62253 170 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 MFGE8Q08431 387 aaPredicted RBP5.19□□□□□ -1.58
USF3-202ENST00000478658 SPP2Q13103 211 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 IKZF1Q13422 519 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 GRM7Q14831 915 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 NANOGP8Q6NSW7 305 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms