RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 IKBIPQ70UQ0 350 aa13.42□□□□□ -0.26
USP11-207ENST00000478596 LARP4Q71RC2 724 aaKnown RBP eCLIP13.42□□□□□ -0.26
USP11-207ENST00000478596 CLNKQ7Z7G1 428 aa13.42□□□□□ -0.26
USP11-207ENST00000478596 ZC3H7AQ8IWR0 971 aaKnown RBP13.42□□□□□ -0.26
USP11-207ENST00000478596 CIARTQ8N365 385 aaPredicted RBP13.42□□□□□ -0.26
USP11-207ENST00000478596 C10orf82Q8WW14 230 aa13.42□□□□□ -0.26
USP11-207ENST00000478596 KLHL29Q96CT2 875 aa13.42□□□□□ -0.26
USP11-207ENST00000478596 OR1F2PQ96R84 312 aa13.42□□□□□ -0.26
USP11-207ENST00000478596 AIG1Q9NVV5 245 aa13.42□□□□□ -0.26
USP11-207ENST00000478596 BAIAP2L1Q9UHR4 511 aa13.42□□□□□ -0.26
USP11-207ENST00000478596 A0A1B0GTH9 108 aa13.41□□□□□ -0.26
USP11-207ENST00000478596 ERAL1O75616 437 aaKnown RBP13.41□□□□□ -0.26
USP11-207ENST00000478596 IL10P22301 178 aa13.41□□□□□ -0.26
USP11-207ENST00000478596 PPP2R1BP30154 601 aa13.41□□□□□ -0.26
USP11-207ENST00000478596 NTSP30990 170 aa13.41□□□□□ -0.26
USP11-207ENST00000478596 CLNS1AP54105 237 aaKnown RBP13.41□□□□□ -0.26
USP11-207ENST00000478596 DIO3P55073 304 aa13.41□□□□□ -0.26
USP11-207ENST00000478596 STX4Q12846 297 aa13.41□□□□□ -0.26
USP11-207ENST00000478596 SQLEQ14534 574 aa13.41□□□□□ -0.26
USP11-207ENST00000478596 GSTA3Q16772 222 aa13.41□□□□□ -0.26
USP11-207ENST00000478596 C6orf163Q5TEZ5 329 aa13.41□□□□□ -0.26
USP11-207ENST00000478596 C18orf63Q68DL7 685 aa13.41□□□□□ -0.26
USP11-207ENST00000478596 TMEM205Q6UW68 189 aa13.41□□□□□ -0.26
USP11-207ENST00000478596 R3HCC1LQ7Z5L2 792 aaKnown RBP13.41□□□□□ -0.26
USP11-207ENST00000478596 MIER2Q8N344 545 aa13.41□□□□□ -0.26
USP11-207ENST00000478596 RPRMLQ8N4K4 120 aa13.41□□□□□ -0.26
USP11-207ENST00000478596 HORMAD2Q8N7B1 307 aa13.41□□□□□ -0.26
USP11-207ENST00000478596 AMER2Q8N7J2 671 aa13.41□□□□□ -0.26
USP11-207ENST00000478596 ANKS4BQ8N8V4 417 aa13.41□□□□□ -0.26
USP11-207ENST00000478596 METTL21AQ8WXB1 218 aa13.41□□□□□ -0.26
USP11-207ENST00000478596 EXOSC8Q96B26 276 aaKnown RBP13.41□□□□□ -0.26
USP11-207ENST00000478596 PPCDCQ96CD2 204 aa13.41□□□□□ -0.26
USP11-207ENST00000478596 CCT8L2Q96SF2 557 aa13.41□□□□□ -0.26
USP11-207ENST00000478596 RPF2Q9H7B2 306 aaKnown RBP13.41□□□□□ -0.26
USP11-207ENST00000478596 PRTFDC1Q9NRG1 225 aa13.41□□□□□ -0.26
USP11-207ENST00000478596 BEX4Q9NWD9 120 aaPredicted RBP13.41□□□□□ -0.26
USP11-207ENST00000478596 ANKRD10Q9NXR5 420 aa13.41□□□□□ -0.26
USP11-207ENST00000478596 ASIC5Q9NY37 505 aa13.41□□□□□ -0.26
USP11-207ENST00000478596 CRIM1Q9NZV1 1036 aa13.41□□□□□ -0.26
USP11-207ENST00000478596 MAPRE3Q9UPY8 281 aa13.41□□□□□ -0.26
USP11-207ENST00000478596 ATG4BQ9Y4P1 393 aa13.41□□□□□ -0.26
USP11-207ENST00000478596 C1orf226A1L170 272 aa13.4□□□□□ -0.26
USP11-207ENST00000478596 H7C1Q1 480 aa13.4□□□□□ -0.26
USP11-207ENST00000478596 SNX3O60493 162 aa13.4□□□□□ -0.26
USP11-207ENST00000478596 CRLF1O75462 422 aa13.4□□□□□ -0.26
USP11-207ENST00000478596 NEURL1O76050 574 aa13.4□□□□□ -0.26
USP11-207ENST00000478596 F12P00748 615 aaPredicted RBP13.4□□□□□ -0.26
USP11-207ENST00000478596 ALDOCP09972 364 aaKnown RBP13.4□□□□□ -0.26
USP11-207ENST00000478596 TACR1P25103 407 aa13.4□□□□□ -0.26
USP11-207ENST00000478596 PIK3R1P27986 724 aa13.4□□□□□ -0.26
USP11-207ENST00000478596 NUP107P57740 925 aa13.4□□□□□ -0.26
USP11-207ENST00000478596 PGS1Q32NB8 556 aa13.4□□□□□ -0.26
USP11-207ENST00000478596 SLC25A25Q6KCM7 469 aa13.4□□□□□ -0.26
USP11-207ENST00000478596 ZNF595Q8IYB9 648 aa13.4□□□□□ -0.26
USP11-207ENST00000478596 BCAS4Q8TDM0 211 aa13.4□□□□□ -0.26
USP11-207ENST00000478596 STON2Q8WXE9 905 aa13.4□□□□□ -0.26
USP11-207ENST00000478596 FCRL1Q96LA6 429 aa13.4□□□□□ -0.26
USP11-207ENST00000478596 PRPF18Q99633 342 aaKnown RBP13.4□□□□□ -0.26
USP11-207ENST00000478596 TGIF2Q9GZN2 237 aa13.4□□□□□ -0.26
USP11-207ENST00000478596 SIRT5Q9NXA8 310 aa13.4□□□□□ -0.26
USP11-207ENST00000478596 SH3BP4Q9P0V3 963 aa13.4□□□□□ -0.26
USP11-207ENST00000478596 PSME2Q9UL46 239 aa13.4□□□□□ -0.26
USP11-207ENST00000478596 ARL2BPQ9Y2Y0 163 aa13.4□□□□□ -0.26
USP11-207ENST00000478596 ASB4Q9Y574 426 aa13.4□□□□□ -0.26
USP11-207ENST00000478596 ZNF780BQ9Y6R6 833 aa13.4□□□□□ -0.26
USP11-207ENST00000478596 ANK2Q01484 3957 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 A0A1W2PR48 441 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 NR5A2O00482 541 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 CDK2AP1O14519 115 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 SCAMP2O15127 329 aaKnown RBP13.39□□□□□ -0.27
USP11-207ENST00000478596 ARHGEF9O43307 516 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 WIPF1O43516 503 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 OR10H2O60403 315 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 PRMT3O60678 531 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 DNAJB6O75190 326 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 IFNA16P05015 189 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 DDCP20711 480 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 PRPS1L1P21108 318 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 DCAF7P61962 342 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 CBX1P83916 185 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 ID2Q02363 134 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 DAZAP2Q15038 168 aaPredicted RBP13.39□□□□□ -0.27
USP11-207ENST00000478596 KIAA0040Q15053 153 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 MEP1AQ16819 746 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 PDCD4Q53EL6 469 aaKnown RBP13.39□□□□□ -0.27
USP11-207ENST00000478596 FCRLBQ6BAA4 426 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 PLAG1Q6DJT9 500 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 MRM1Q6IN84 353 aaKnown RBP13.39□□□□□ -0.27
USP11-207ENST00000478596 ANKRD26P1Q6NSI1 321 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 POGLUT1Q8NBL1 392 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 CCDC197Q8NCU1 140 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 FAM222BQ8WU58 562 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 TM4SF18Q96CE8 201 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 EGLN2Q96KS0 407 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 PTCHD1Q96NR3 888 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 BBS4Q96RK4 519 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 KCNK13Q9HB14 408 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 MRGBPQ9NV56 204 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 ATAD3AQ9NVI7 634 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 HEY2Q9UBP5 337 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms