RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 THAP10Q9P2Z0 257 aaPredicted RBP13.45□□□□□ -0.26
NPHP4-208ENST00000478423 SOBPA7XYQ1 873 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 FAM155AB1AL88 458 aaPredicted RBP13.45□□□□□ -0.26
NPHP4-208ENST00000478423 SGK494L7N484 410 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 GNAO1P09471 354 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 OSMP13725 252 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 SHHQ15465 462 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 MICAQ29983 383 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 CCSMST1Q4G0I0 132 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 GGTA1PQ4G0N0 100 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 TMPRSS9Q7Z410 1059 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 FUNDC1Q8IVP5 155 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 ZNF101Q8IZC7 436 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 ADAMTS18Q8TE60 1221 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 ZNF597Q96LX8 424 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 TMEM168Q9H0V1 697 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 NUDT7P0C024 238 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 ITIH1P19827 911 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 ENDOUP21128 410 aaKnown RBP13.45□□□□□ -0.26
NPHP4-208ENST00000478423 MTNR1AP48039 350 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 ANKRD54Q6NXT1 300 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 ZC3H14Q6PJT7 736 aaKnown RBP13.45□□□□□ -0.26
NPHP4-208ENST00000478423 PLEKHG7Q6ZR37 379 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 ZNF627Q7L945 461 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 GPR149Q86SP6 731 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 SLC44A3Q8N4M1 653 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 DENND6BQ8NEG7 585 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 OR8K3Q8NH51 312 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 TFAP2CQ92754 450 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 IFT46Q9NQC8 304 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 CXCL12P48061 93 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 ZNF77Q15935 545 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 METTL4Q8N3J2 472 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 OLIG1Q8TAK6 271 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 DMRTB1Q96MA1 342 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 GVINP1Q7Z2Y8 2422 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 PGCP20142 388 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 CD38P28907 300 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 OR2B6P58173 313 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 CHAF1BQ13112 559 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 CMPK2Q5EBM0 449 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 AFMIDQ63HM1 303 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 QSOX2Q6ZRP7 698 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 WDR53Q7Z5U6 358 aaPredicted RBP13.44□□□□□ -0.26
NPHP4-208ENST00000478423 TMEM151BQ8IW70 566 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 TUBB1Q9H4B7 451 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 ZNF576Q9H609 170 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 IL21Q9HBE4 155 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 CNIH4Q9P003 139 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 TPRP12270 2363 aaKnown RBP13.44□□□□□ -0.26
NPHP4-208ENST00000478423 SLC22A31A6NKX4 558 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 FLRT2O43155 660 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 PRAMEF2O60811 474 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 SPARCP09486 303 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 TNFRSF4P43489 277 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 STARP49675 285 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 CDK5R2Q13319 367 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 SERTAD2Q14140 314 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 PROX2Q3B8N5 592 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 SLC22A16Q86VW1 577 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 MCATQ8IVS2 390 aaKnown RBP13.44□□□□□ -0.26
NPHP4-208ENST00000478423 FAM86B1Q8N7N1 296 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 ZFP41Q8N8Y5 198 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 GATA6Q92908 595 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 SLC41A3Q96GZ6 507 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 MAELQ96JY0 434 aaKnown RBP13.44□□□□□ -0.26
NPHP4-208ENST00000478423 ZNF583Q96ND8 569 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 P2RY12Q9H244 342 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 KCMF1Q9P0J7 381 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 EBF1Q9UH73 591 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 ITGB1BP2Q9UKP3 347 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 CDH10Q9Y6N8 788 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 HOXC11O43248 304 aaPredicted RBP13.44□□□□□ -0.26
NPHP4-208ENST00000478423 B4GAT1O43505 415 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 SLCO2B1O94956 709 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 GSTT2BP0CG30 244 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 LPAL2Q16609 132 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 TRIM46Q7Z4K8 759 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 TOMM5Q8N4H5 51 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 MRPL38Q96DV4 380 aaKnown RBP13.44□□□□□ -0.26
NPHP4-208ENST00000478423 MCCC2Q9HCC0 563 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 EPHA6Q9UF33 1036 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 PMF1-BGLAPU3KQ54 211 aa13.44□□□□□ -0.26
NPHP4-208ENST00000478423 FOXE1O00358 373 aaPredicted RBP13.43□□□□□ -0.26
NPHP4-208ENST00000478423 CDC40O60508 579 aaKnown RBP eCLIP13.43□□□□□ -0.26
NPHP4-208ENST00000478423 JRKO75564 520 aa13.43□□□□□ -0.26
NPHP4-208ENST00000478423 CTHP32929 405 aa13.43□□□□□ -0.26
NPHP4-208ENST00000478423 OR3A3P47888 321 aa13.43□□□□□ -0.26
NPHP4-208ENST00000478423 OR3A2P47893 321 aa13.43□□□□□ -0.26
NPHP4-208ENST00000478423 GAS6Q14393 721 aa13.43□□□□□ -0.26
NPHP4-208ENST00000478423 TMIGD2Q96BF3 282 aa13.43□□□□□ -0.26
NPHP4-208ENST00000478423 STRADBQ9C0K7 418 aa13.43□□□□□ -0.26
NPHP4-208ENST00000478423 IL37Q9NZH6 218 aa13.43□□□□□ -0.26
NPHP4-208ENST00000478423 NAALAD2Q9Y3Q0 740 aa13.43□□□□□ -0.26
NPHP4-208ENST00000478423 LAMB2P55268 1798 aa13.43□□□□□ -0.26
NPHP4-208ENST00000478423 A0A1W2PPK0 400 aa13.43□□□□□ -0.26
NPHP4-208ENST00000478423 PRRT4C9JH25 899 aa13.43□□□□□ -0.26
NPHP4-208ENST00000478423 TAPBPO15533 448 aa13.43□□□□□ -0.26
NPHP4-208ENST00000478423 HOXC5Q00444 222 aa13.43□□□□□ -0.26
NPHP4-208ENST00000478423 GBX1Q14549 363 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms