RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 SYPL1Q16563 259 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 PRICKLE4Q2TBC4 344 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 NADK2Q4G0N4 442 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 FHL5Q5TD97 284 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 TCTN3Q6NUS6 607 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 CD300LDQ6UXZ3 194 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 GPR141Q7Z602 305 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 TSEN54Q7Z6J9 526 aaKnown RBP7.43□□□□□ -1.22
VMA21-203ENST00000477649 GALNT10Q86SR1 603 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 SLC44A2Q8IWA5 706 aaPredicted RBP7.43□□□□□ -1.22
VMA21-203ENST00000477649 TMEFF1Q8IYR6 380 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 OFCC1Q8IZS5 231 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 HS3ST5Q8IZT8 346 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 SVOPQ8N4V2 548 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 SMYD1Q8NB12 490 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 OR7G2Q8NG99 324 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 GPR32P1Q8NGA4 272 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 OR10Q1Q8NGQ4 319 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 MAFAQ8NHW3 353 aaPredicted RBP7.43□□□□□ -1.22
VMA21-203ENST00000477649 CEP76Q8TAP6 659 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 TRUB1Q8WWH5 349 aaKnown RBP7.43□□□□□ -1.22
VMA21-203ENST00000477649 GAB3Q8WWW8 586 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 NCSTNQ92542 709 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 RBM18Q96H35 190 aaKnown RBP7.43□□□□□ -1.22
VMA21-203ENST00000477649 OR1F2PQ96R84 312 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 TSC22D3Q99576 134 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 FEVQ99581 238 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 MAP3K3Q99759 626 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 FNDC11Q9BVV2 318 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 DGCR6LQ9BY27 220 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 SAP130Q9H0E3 1048 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 SLC38A1Q9H2H9 487 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 RIBC2Q9H4K1 309 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 NMNAT1Q9HAN9 279 aaPredicted RBP7.43□□□□□ -1.22
VMA21-203ENST00000477649 FANCEQ9HB96 536 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 FAM60AQ9NP50 221 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 KRCC1Q9NPI7 259 aaPredicted RBP7.43□□□□□ -1.22
VMA21-203ENST00000477649 SOHLH2Q9NX45 425 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 TMEM9Q9P0T7 183 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 GMEB2Q9UKD1 530 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 WDR45Q9Y484 360 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 PCDHGB1Q9Y5G3 927 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 PCDHGA8Q9Y5G5 932 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 MAGED1Q9Y5V3 778 aaPredicted RBP7.43□□□□□ -1.22
VMA21-203ENST00000477649 SNX11Q9Y5W9 270 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 SNX5Q9Y5X3 404 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 MN1Q10571 1320 aaPredicted RBP7.43□□□□□ -1.22
VMA21-203ENST00000477649 TTC28Q96AY4 2481 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 IGHV1OR21-1A0A087WYE8 117 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 PRAMEF27A3QJZ7 478 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 SH3D21A4FU49 640 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 AP3D1O14617 1153 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 LAMTOR5O43504 91 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 FGF17O60258 216 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 FMO6PO60774 539 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 NOL3O60936 208 aaKnown RBP7.42□□□□□ -1.22
VMA21-203ENST00000477649 PRKRAO75569 313 aaKnown RBP7.42□□□□□ -1.22
VMA21-203ENST00000477649 SEC24DO94855 1032 aaPredicted RBP7.42□□□□□ -1.22
VMA21-203ENST00000477649 DIRAS1O95057 198 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 CPNE6O95741 557 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 ANGPTL1O95841 491 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 DCNP07585 359 aaKnown RBP7.42□□□□□ -1.22
VMA21-203ENST00000477649 CHRM4P08173 479 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 EEF1B2P24534 225 aaKnown RBP7.42□□□□□ -1.22
VMA21-203ENST00000477649 LCN1P31025 176 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 GGT2P36268 569 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 PIGAP37287 484 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 MAP3K8P41279 467 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 OR1E2P47887 323 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 PPM1FP49593 454 aaPredicted RBP7.42□□□□□ -1.22
VMA21-203ENST00000477649 UGT2B15P54855 530 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 CDC42P60953 191 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 RPP38P78345 283 aaKnown RBP7.42□□□□□ -1.22
VMA21-203ENST00000477649 DUSP2Q05923 314 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 ST3GAL3Q11203 375 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 STX4Q12846 297 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 CDK5R2Q13319 367 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 ILKQ13418 452 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 TRAM2Q15035 370 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 EXOC3L2Q2M3D2 409 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 DEFB133Q30KQ1 61 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 ZNF311Q5JNZ3 666 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 RPS26P11Q5JNZ5 115 aaPredicted RBP7.42□□□□□ -1.22
VMA21-203ENST00000477649 RNF220Q5VTB9 566 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 PEAR1Q5VY43 1037 aaPredicted RBP7.42□□□□□ -1.22
VMA21-203ENST00000477649 PMS2CLQ68D20 193 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 ZNF770Q6IQ21 691 aaPredicted RBP7.42□□□□□ -1.22
VMA21-203ENST00000477649 FAM180BQ6P0A1 224 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 SATL1Q86VE3 508 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 P3H2Q8IVL5 708 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 GALNT12Q8IXK2 581 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 GPR135Q8IZ08 494 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 ZNF619Q8N2I2 560 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 VWA5B2Q8N398 1253 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 D2HGDHQ8N465 521 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 DEFB119Q8N690 84 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 SLC5A8Q8N695 610 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 FAM181AQ8N9Y4 354 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 OR7G1Q8NGA0 311 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 OR5D16Q8NGK9 328 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms