RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.91□□□□□ -1.62
VPS45-207ENST00000477558 IL17BQ9UHF5 180 aa4.91□□□□□ -1.62
VPS45-207ENST00000477558 TMCO1Q9UM00 188 aa4.91□□□□□ -1.62
VPS45-207ENST00000477558 SLC22A14Q9Y267 594 aa4.91□□□□□ -1.62
VPS45-207ENST00000477558 IKBKGQ9Y6K9 419 aa4.91□□□□□ -1.62
VPS45-207ENST00000477558 V9GYY5 206 aaPredicted RBP4.91□□□□□ -1.62
VPS45-207ENST00000477558 TNRC6AQ8NDV7 1962 aaKnown RBP4.9□□□□□ -1.62
VPS45-207ENST00000477558 CPAMD8Q8IZJ3 1885 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 A0A0J9YVX5 310 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 HYKKA2RU49 373 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 A8MT66 165 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 C4orf51C9J302 202 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 J3KTA2 159 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 K7EPI3 171 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 TXNDC9O14530 226 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 PCDH17O14917 1159 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 DHHO43323 396 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 TMPRSS11DO60235 418 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 UGDHO60701 494 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 PRAMEF2O60811 474 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 STK16O75716 305 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 TNFRSF6BO95407 300 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 CYC1P08574 325 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 RBP1P09455 135 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 SMIM10L1P0DMW3 83 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 APEHP13798 732 aaKnown RBP4.9□□□□□ -1.62
VPS45-207ENST00000477558 GNAZP19086 355 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 PTPN4P29074 926 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 PPM1FP49593 454 aaPredicted RBP4.9□□□□□ -1.62
VPS45-207ENST00000477558 EFNA3P52797 238 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 ARSFP54793 590 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 VSX2P58304 361 aaPredicted RBP4.9□□□□□ -1.62
VPS45-207ENST00000477558 TRAF3Q13114 568 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 DNASE1L3Q13609 305 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 HKDC1Q2TB90 917 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 TUBB8Q3ZCM7 444 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 GGTA1PQ4G0N0 100 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 NKAIN1Q4KMZ8 207 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 WASHC2DQ5SRD0 308 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 LGSNQ5TDP6 509 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 FCRLBQ6BAA4 426 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 PRMT9Q6P2P2 845 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 TMPRSS11BQ86T26 416 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 SYVN1Q86TM6 617 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 ASPGQ86U10 573 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 TRABD2AQ86V40 505 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 PLD3Q8IV08 490 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.9□□□□□ -1.62
VPS45-207ENST00000477558 LAS2Q8IYD9 372 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 CSNK1A1LQ8N752 337 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 L3MBTL4Q8NA19 623 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 ZNF740Q8NDX6 193 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 UBLCP1Q8WVY7 318 aaPredicted RBP4.9□□□□□ -1.62
VPS45-207ENST00000477558 STARD8Q92502 1023 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 L3HYPDHQ96EM0 354 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 SMIM10Q96HG1 83 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 SNX18Q96RF0 628 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 PRPF18Q99633 342 aaKnown RBP4.9□□□□□ -1.62
VPS45-207ENST00000477558 EGFL8Q99944 293 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 C17orf62Q9BQA9 187 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 EFHD1Q9BUP0 239 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 EFCAB11Q9BUY7 163 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 ROPN1BQ9BZX4 212 aaPredicted RBP4.9□□□□□ -1.62
VPS45-207ENST00000477558 ROPN1Q9HAT0 212 aaPredicted RBP4.9□□□□□ -1.62
VPS45-207ENST00000477558 CUTCQ9NTM9 273 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 DNAJC11Q9NVH1 559 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 WWOXQ9NZC7 414 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 TMEM216Q9P0N5 145 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 DHCR7Q9UBM7 475 aaKnown RBP4.9□□□□□ -1.62
VPS45-207ENST00000477558 KCND3Q9UK17 655 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 PCTPQ9UKL6 214 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 PADI1Q9ULC6 663 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 VPS4AQ9UN37 437 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 MRPS2Q9Y399 296 aaKnown RBP4.9□□□□□ -1.62
VPS45-207ENST00000477558 SLC22A7Q9Y694 548 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 KCNE2Q9Y6J6 123 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 COX11Q9Y6N1 276 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 SCN3AQ9NY46 2000 aa4.9□□□□□ -1.62
VPS45-207ENST00000477558 ZNF462Q96JM2 2506 aa4.9□□□□□ -1.63
VPS45-207ENST00000477558 SCN2AQ99250 2005 aa4.9□□□□□ -1.63
VPS45-207ENST00000477558 A0A1W2PPM1 405 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 FEZF1A0PJY2 475 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 PABPN1LA6NDY0 278 aaKnown RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 NCF1BA6NI72 391 aaPredicted RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 NCF1CA8MVU1 366 aaPredicted RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 SUPT3HB4E1H0 165 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 G3V2L1 256 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 H0YIG0 161 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 H0YIV9 168 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 OR7A17O14581 309 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 DNPH1O43598 174 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 ASNA1O43681 348 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 TYROBPO43914 113 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 PLIN3O60664 434 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 GLRA3O75311 464 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 PROP1O75360 226 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 SUPT3HO75486 399 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 SCELO95171 688 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 SIX3O95343 332 aaPredicted RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 NSA2O95478 260 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms