RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 DGKQP52824 942 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 DCAF7P61962 342 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 ETF1P62495 437 aaKnown RBP11.91□□□□□ -0.5
MRPL55-228ENST00000476267 MRPS35P82673 323 aaKnown RBP11.91□□□□□ -0.5
MRPL55-228ENST00000476267 HMGCS1Q01581 520 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 SLC7A5Q01650 507 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 PLCXD2Q0VAA5 305 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 IFT88Q13099 833 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 RCAN2Q14206 197 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 TOMM20Q15388 145 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 LTB4RQ15722 352 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 ZNF628Q5EBL2 1059 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 TTC19Q6DKK2 380 aaPredicted RBP11.91□□□□□ -0.5
MRPL55-228ENST00000476267 FAM180BQ6P0A1 224 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 PLXDC2Q6UX71 529 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 MILR1Q7Z6M3 343 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 CTAGE4Q8IX94 777 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 WFDC11Q8NEX6 87 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 ADCY4Q8NFM4 1077 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 OR52R1Q8NGF1 315 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 ZNF675Q8TD23 568 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 KLHL29Q96CT2 875 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 BTBD9Q96Q07 612 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 SFXN3Q9BWM7 321 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 ELOVL6Q9H5J4 265 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 SERHLQ9NQF3 203 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 GALNT8Q9NY28 637 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 EHD3Q9NZN3 535 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 HEY2Q9UBP5 337 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 TRPS1Q9UHF7 1281 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 BCAP29Q9UHQ4 241 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 MAPRE3Q9UPY8 281 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 OR6C70A6NIJ9 312 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 A8MT66 165 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 HCRTR2O43614 444 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 TSPAN2O60636 221 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 GUCY1B2O75343 617 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 ERAL1O75616 437 aaKnown RBP11.9□□□□□ -0.5
MRPL55-228ENST00000476267 TNFSF13O75888 250 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 OTCP00480 354 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 CT45A8P0DMV1 189 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 CT45A9P0DMV2 189 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 COL6A2P12110 1019 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 PCSK2P16519 638 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 ZNF708P17019 499 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 CD53P19397 219 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 PHBP35232 272 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 ARL1P40616 181 aaPredicted RBP11.9□□□□□ -0.5
MRPL55-228ENST00000476267 GAS1P54826 345 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 CLDN18P56856 261 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 TRA2BP62995 288 aaKnown RBP11.9□□□□□ -0.5
MRPL55-228ENST00000476267 TSNAXIP1Q2TAA8 658 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 CT45A2Q5DJT8 189 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 SGO1Q5FBB7 561 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 TCHHL1Q5QJ38 904 aaPredicted RBP11.9□□□□□ -0.5
MRPL55-228ENST00000476267 SYT10Q6XYQ8 523 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 TRIM42Q8IWZ5 723 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 C1orf52Q8N6N3 182 aaKnown RBP11.9□□□□□ -0.5
MRPL55-228ENST00000476267 SMPDL3BQ92485 455 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 WNT2BQ93097 391 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 DACH2Q96NX9 599 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 PAFAH2Q99487 392 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 TM9SF2Q99805 663 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 RBM24Q9BX46 236 aaKnown RBP11.9□□□□□ -0.5
MRPL55-228ENST00000476267 CDC42EP4Q9H3Q1 356 aaKnown RBP11.9□□□□□ -0.5
MRPL55-228ENST00000476267 ANKRA2Q9H9E1 313 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 KLRF1Q9NZS2 232 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 PRODH2Q9UF12 536 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 FBXL2Q9UKC9 423 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 MRPS18CQ9Y3D5 142 aaKnown RBP11.9□□□□□ -0.5
MRPL55-228ENST00000476267 WIF1Q9Y5W5 379 aa11.9□□□□□ -0.5
MRPL55-228ENST00000476267 FLNAP21333 2647 aaKnown RBP11.9□□□□□ -0.51
MRPL55-228ENST00000476267 H0Y3Z8 333 aa11.89□□□□□ -0.51
MRPL55-228ENST00000476267 SMIM24O75264 130 aa11.89□□□□□ -0.51
MRPL55-228ENST00000476267 ERN1O75460 977 aaKnown RBP11.89□□□□□ -0.51
MRPL55-228ENST00000476267 TSPAN8P19075 237 aa11.89□□□□□ -0.51
MRPL55-228ENST00000476267 ECHS1P30084 290 aa11.89□□□□□ -0.51
MRPL55-228ENST00000476267 SRD5A2P31213 254 aa11.89□□□□□ -0.51
MRPL55-228ENST00000476267 CASQ1P31415 396 aa11.89□□□□□ -0.51
MRPL55-228ENST00000476267 CDH13P55290 713 aa11.89□□□□□ -0.51
MRPL55-228ENST00000476267 RAE1P78406 368 aaKnown RBP11.89□□□□□ -0.51
MRPL55-228ENST00000476267 ENPP6Q6UWR7 440 aa11.89□□□□□ -0.51
MRPL55-228ENST00000476267 NPSR1Q6W5P4 371 aa11.89□□□□□ -0.51
MRPL55-228ENST00000476267 IFNEQ86WN2 208 aa11.89□□□□□ -0.51
MRPL55-228ENST00000476267 CXorf67Q86X51 503 aaPredicted RBP11.89□□□□□ -0.51
MRPL55-228ENST00000476267 PLCZ1Q86YW0 608 aa11.89□□□□□ -0.51
MRPL55-228ENST00000476267 C17orf53Q8N3J3 647 aaPredicted RBP11.89□□□□□ -0.51
MRPL55-228ENST00000476267 OR14L1PQ8NHC6 308 aa11.89□□□□□ -0.51
MRPL55-228ENST00000476267 DCAKDQ8WVC6 231 aa11.89□□□□□ -0.51
MRPL55-228ENST00000476267 SELENOMQ8WWX9 145 aa11.89□□□□□ -0.51
MRPL55-228ENST00000476267 TMBIM1Q969X1 311 aa11.89□□□□□ -0.51
MRPL55-228ENST00000476267 ERP27Q96DN0 273 aa11.89□□□□□ -0.51
MRPL55-228ENST00000476267 C11orf24Q96F05 449 aaPredicted RBP11.89□□□□□ -0.51
MRPL55-228ENST00000476267 VSTM2LQ96N03 204 aa11.89□□□□□ -0.51
MRPL55-228ENST00000476267 COL21A1Q96P44 957 aa11.89□□□□□ -0.51
MRPL55-228ENST00000476267 HBEGFQ99075 208 aa11.89□□□□□ -0.51
MRPL55-228ENST00000476267 MRPL57Q9BQC6 102 aaKnown RBP11.89□□□□□ -0.51
MRPL55-228ENST00000476267 MRPL46Q9H2W6 279 aaKnown RBP11.89□□□□□ -0.51
MRPL55-228ENST00000476267 MCM8Q9UJA3 840 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms