RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 FAIMQ9NVQ4 179 aa13.01□□□□□ -0.33
CSNK2B-207ENST00000475875 TRRAPQ9Y4A5 3859 aa13.01□□□□□ -0.33
CSNK2B-207ENST00000475875 YLPM1P49750 1951 aaKnown RBP13.01□□□□□ -0.33
CSNK2B-207ENST00000475875 NOTCH1P46531 2555 aa13□□□□□ -0.33
CSNK2B-207ENST00000475875 TCRBV7S3A2A0A539 114 aa13□□□□□ -0.33
CSNK2B-207ENST00000475875 PPM1BO75688 479 aa13□□□□□ -0.33
CSNK2B-207ENST00000475875 PSMB1P20618 241 aaKnown RBP13□□□□□ -0.33
CSNK2B-207ENST00000475875 TLX1P31314 330 aaPredicted RBP13□□□□□ -0.33
CSNK2B-207ENST00000475875 PTGDSP41222 190 aa13□□□□□ -0.33
CSNK2B-207ENST00000475875 MAGEA6P43360 314 aa13□□□□□ -0.33
CSNK2B-207ENST00000475875 CAV1Q03135 178 aa13□□□□□ -0.33
CSNK2B-207ENST00000475875 PPP1R3AQ16821 1122 aa13□□□□□ -0.33
CSNK2B-207ENST00000475875 TMEM35AQ53FP2 167 aa13□□□□□ -0.33
CSNK2B-207ENST00000475875 NCMAPQ5T1S8 102 aa13□□□□□ -0.33
CSNK2B-207ENST00000475875 RNASEH2BQ5TBB1 312 aaKnown RBP13□□□□□ -0.33
CSNK2B-207ENST00000475875 UBE3DQ7Z6J8 389 aa13□□□□□ -0.33
CSNK2B-207ENST00000475875 PLCZ1Q86YW0 608 aa13□□□□□ -0.33
CSNK2B-207ENST00000475875 GBP7Q8N8V2 638 aaPredicted RBP13□□□□□ -0.33
CSNK2B-207ENST00000475875 NAT8LQ8N9F0 302 aa13□□□□□ -0.33
CSNK2B-207ENST00000475875 OR6K3Q8NGY3 331 aa13□□□□□ -0.33
CSNK2B-207ENST00000475875 PDLIM5Q96HC4 596 aaKnown RBP13□□□□□ -0.33
CSNK2B-207ENST00000475875 NTMT1Q9BV86 223 aa13□□□□□ -0.33
CSNK2B-207ENST00000475875 XAB2Q9HCS7 855 aaKnown RBP13□□□□□ -0.33
CSNK2B-207ENST00000475875 C20orf96Q9NUD7 363 aaPredicted RBP13□□□□□ -0.33
CSNK2B-207ENST00000475875 GPRC5BQ9NZH0 403 aa13□□□□□ -0.33
CSNK2B-207ENST00000475875 ZNF281Q9Y2X9 895 aa13□□□□□ -0.33
CSNK2B-207ENST00000475875 MALRD1Q5VYJ5 2156 aa13□□□□□ -0.33
CSNK2B-207ENST00000475875 SDR42E2A6NKP2 422 aa12.99□□□□□ -0.33
CSNK2B-207ENST00000475875 CLOCKO15516 846 aa12.99□□□□□ -0.33
CSNK2B-207ENST00000475875 SEC31AO94979 1220 aaKnown RBP12.99□□□□□ -0.33
CSNK2B-207ENST00000475875 CD8AP01732 235 aa12.99□□□□□ -0.33
CSNK2B-207ENST00000475875 FCGR2AP12318 317 aa12.99□□□□□ -0.33
CSNK2B-207ENST00000475875 MLNP12872 115 aa12.99□□□□□ -0.33
CSNK2B-207ENST00000475875 IL11P20809 199 aa12.99□□□□□ -0.33
CSNK2B-207ENST00000475875 AP5B1Q2VPB7 878 aa12.99□□□□□ -0.33
CSNK2B-207ENST00000475875 ANKRD22Q5VYY1 191 aa12.99□□□□□ -0.33
CSNK2B-207ENST00000475875 IFT20Q8IY31 132 aa12.99□□□□□ -0.33
CSNK2B-207ENST00000475875 PDIK1LQ8N165 341 aa12.99□□□□□ -0.33
CSNK2B-207ENST00000475875 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.99□□□□□ -0.33
CSNK2B-207ENST00000475875 PPM1NQ8N819 430 aa12.99□□□□□ -0.33
CSNK2B-207ENST00000475875 RDH11Q8TC12 318 aa12.99□□□□□ -0.33
CSNK2B-207ENST00000475875 IFT81Q8WYA0 676 aa12.99□□□□□ -0.33
CSNK2B-207ENST00000475875 HGDQ93099 445 aa12.99□□□□□ -0.33
CSNK2B-207ENST00000475875 SERPINB12Q96P63 405 aa12.99□□□□□ -0.33
CSNK2B-207ENST00000475875 RHOXF2Q9BQY4 288 aa12.99□□□□□ -0.33
CSNK2B-207ENST00000475875 GALNT9Q9HCQ5 603 aa12.99□□□□□ -0.33
CSNK2B-207ENST00000475875 KLRF1Q9NZS2 232 aa12.99□□□□□ -0.33
CSNK2B-207ENST00000475875 PHF11Q9UIL8 331 aa12.99□□□□□ -0.33
CSNK2B-207ENST00000475875 EMC9Q9Y3B6 208 aa12.99□□□□□ -0.33
CSNK2B-207ENST00000475875 WDR47O94967 919 aa12.98□□□□□ -0.33
CSNK2B-207ENST00000475875 GPR75O95800 540 aa12.98□□□□□ -0.33
CSNK2B-207ENST00000475875 CSF3P09919 207 aa12.98□□□□□ -0.33
CSNK2B-207ENST00000475875 SLC35E2BP0CK96 405 aa12.98□□□□□ -0.33
CSNK2B-207ENST00000475875 SLC35E2P0CK97 266 aa12.98□□□□□ -0.33
CSNK2B-207ENST00000475875 USF1P22415 310 aaPredicted RBP12.98□□□□□ -0.33
CSNK2B-207ENST00000475875 PLTPP55058 493 aa12.98□□□□□ -0.33
CSNK2B-207ENST00000475875 CDKN2DP55273 166 aa12.98□□□□□ -0.33
CSNK2B-207ENST00000475875 ARL4CP56559 192 aa12.98□□□□□ -0.33
CSNK2B-207ENST00000475875 LSM11P83369 360 aaKnown RBP eCLIP12.98□□□□□ -0.33
CSNK2B-207ENST00000475875 TNFRSF17Q02223 184 aa12.98□□□□□ -0.33
CSNK2B-207ENST00000475875 PDAP1Q13442 181 aaKnown RBP12.98□□□□□ -0.33
CSNK2B-207ENST00000475875 TEX35Q5T0J7 233 aa12.98□□□□□ -0.33
CSNK2B-207ENST00000475875 BEND4Q6ZU67 534 aa12.98□□□□□ -0.33
CSNK2B-207ENST00000475875 IL17RELQ6ZVW7 336 aa12.98□□□□□ -0.33
CSNK2B-207ENST00000475875 C2CD4AQ8NCU7 369 aaPredicted RBP12.98□□□□□ -0.33
CSNK2B-207ENST00000475875 STEAP2Q8NFT2 490 aa12.98□□□□□ -0.33
CSNK2B-207ENST00000475875 MS4A8Q9BY19 250 aa12.98□□□□□ -0.33
CSNK2B-207ENST00000475875 C12orf65Q9H3J6 166 aaKnown RBP12.98□□□□□ -0.33
CSNK2B-207ENST00000475875 CHODLQ9H9P2 273 aa12.98□□□□□ -0.33
CSNK2B-207ENST00000475875 DNAJC11Q9NVH1 559 aa12.98□□□□□ -0.33
CSNK2B-207ENST00000475875 ZNF490Q9ULM2 529 aaPredicted RBP12.98□□□□□ -0.33
CSNK2B-207ENST00000475875 PRR14LQ5THK1 2151 aa12.98□□□□□ -0.33
CSNK2B-207ENST00000475875 ALPK2Q86TB3 2170 aa12.98□□□□□ -0.33
CSNK2B-207ENST00000475875 UQCRHLA0A096LP55 91 aa12.97□□□□□ -0.33
CSNK2B-207ENST00000475875 PRAMEF25A6NGN4 478 aa12.97□□□□□ -0.33
CSNK2B-207ENST00000475875 LINC01387J3KSC0 135 aa12.97□□□□□ -0.33
CSNK2B-207ENST00000475875 AIFM1O95831 613 aa12.97□□□□□ -0.33
CSNK2B-207ENST00000475875 ITGA2P17301 1181 aa12.97□□□□□ -0.33
CSNK2B-207ENST00000475875 DPP4P27487 766 aa12.97□□□□□ -0.33
CSNK2B-207ENST00000475875 SSTR4P31391 388 aa12.97□□□□□ -0.33
CSNK2B-207ENST00000475875 BUD31P41223 144 aaPredicted RBP12.97□□□□□ -0.33
CSNK2B-207ENST00000475875 SSR2P43308 183 aa12.97□□□□□ -0.33
CSNK2B-207ENST00000475875 ZNF844Q08AG5 666 aa12.97□□□□□ -0.33
CSNK2B-207ENST00000475875 GPR180Q86V85 440 aa12.97□□□□□ -0.33
CSNK2B-207ENST00000475875 GPSM1Q86YR5 675 aa12.97□□□□□ -0.33
CSNK2B-207ENST00000475875 PRR22Q8IZ63 422 aa12.97□□□□□ -0.33
CSNK2B-207ENST00000475875 ZNF615Q8N8J6 731 aa12.97□□□□□ -0.33
CSNK2B-207ENST00000475875 FNDC9Q8TBE3 224 aa12.97□□□□□ -0.33
CSNK2B-207ENST00000475875 DOK4Q8TEW6 326 aa12.97□□□□□ -0.33
CSNK2B-207ENST00000475875 FAM168AQ92567 244 aa12.97□□□□□ -0.33
CSNK2B-207ENST00000475875 WDR34Q96EX3 536 aa12.97□□□□□ -0.33
CSNK2B-207ENST00000475875 PTCD3Q96EY7 689 aaKnown RBP12.97□□□□□ -0.33
CSNK2B-207ENST00000475875 NODALQ96S42 347 aa12.97□□□□□ -0.33
CSNK2B-207ENST00000475875 EFCAB11Q9BUY7 163 aa12.97□□□□□ -0.33
CSNK2B-207ENST00000475875 PINK1Q9BXM7 581 aa12.97□□□□□ -0.33
CSNK2B-207ENST00000475875 HDHD5Q9BXW7 423 aa12.97□□□□□ -0.33
CSNK2B-207ENST00000475875 TRIM2Q9C040 744 aa12.97□□□□□ -0.33
CSNK2B-207ENST00000475875 CXorf21Q9HAI6 301 aa12.97□□□□□ -0.33
CSNK2B-207ENST00000475875 EML4Q9HC35 981 aaKnown RBP12.97□□□□□ -0.33
CSNK2B-207ENST00000475875 DMGDHQ9UI17 866 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms