RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 STMN3Q9NZ72 180 aa20.51■□□□□ 0.87
MCF2L2-209ENST00000475664 YARS2Q9Y2Z4 477 aaKnown RBP20.51■□□□□ 0.87
MCF2L2-209ENST00000475664 PCDHGB7Q9Y5F8 929 aa20.51■□□□□ 0.87
MCF2L2-209ENST00000475664 EXPH5Q8NEV8 1989 aa20.51■□□□□ 0.87
MCF2L2-209ENST00000475664 FRG2CA6NGY1 282 aa20.5■□□□□ 0.87
MCF2L2-209ENST00000475664 CAPN14A8MX76 684 aa20.5■□□□□ 0.87
MCF2L2-209ENST00000475664 K7EM74 188 aa20.5■□□□□ 0.87
MCF2L2-209ENST00000475664 ERVH48-1M5A8F1 160 aa20.5■□□□□ 0.87
MCF2L2-209ENST00000475664 FBP2O00757 339 aa20.5■□□□□ 0.87
MCF2L2-209ENST00000475664 PDGFAP04085 211 aa20.5■□□□□ 0.87
MCF2L2-209ENST00000475664 HMGN2P05204 90 aaKnown RBP20.5■□□□□ 0.87
MCF2L2-209ENST00000475664 PRIM2P49643 509 aa20.5■□□□□ 0.87
MCF2L2-209ENST00000475664 NR0B1P51843 470 aaKnown RBP20.5■□□□□ 0.87
MCF2L2-209ENST00000475664 CORO7P57737 925 aa20.5■□□□□ 0.87
MCF2L2-209ENST00000475664 PSG6Q00889 435 aa20.5■□□□□ 0.87
MCF2L2-209ENST00000475664 LASP1Q14847 261 aaKnown RBP20.5■□□□□ 0.87
MCF2L2-209ENST00000475664 NNATQ16517 81 aa20.5■□□□□ 0.87
MCF2L2-209ENST00000475664 GTDC1Q4AE62 458 aa20.5■□□□□ 0.87
MCF2L2-209ENST00000475664 ZCCHC12Q6PEW1 402 aa20.5■□□□□ 0.87
MCF2L2-209ENST00000475664 C6orf120Q7Z4R8 191 aa20.5■□□□□ 0.87
MCF2L2-209ENST00000475664 WDR53Q7Z5U6 358 aaPredicted RBP20.5■□□□□ 0.87
MCF2L2-209ENST00000475664 CDRT4Q8N9R6 151 aa20.5■□□□□ 0.87
MCF2L2-209ENST00000475664 NEURL3Q96EH8 262 aa20.5■□□□□ 0.87
MCF2L2-209ENST00000475664 C16orf58Q96GQ5 468 aa20.5■□□□□ 0.87
MCF2L2-209ENST00000475664 RNF32Q9H0A6 362 aa20.5■□□□□ 0.87
MCF2L2-209ENST00000475664 CACNA1BQ00975 2339 aa20.5■□□□□ 0.87
MCF2L2-209ENST00000475664 TTC36A6NLP5 189 aa20.49■□□□□ 0.87
MCF2L2-209ENST00000475664 BBIP1A8MTZ0 92 aa20.49■□□□□ 0.87
MCF2L2-209ENST00000475664 ANP32DO95626 131 aa20.49■□□□□ 0.87
MCF2L2-209ENST00000475664 C1QCP02747 245 aa20.49■□□□□ 0.87
MCF2L2-209ENST00000475664 ACP2P11117 423 aa20.49■□□□□ 0.87
MCF2L2-209ENST00000475664 TRHRP34981 398 aaPredicted RBP20.49■□□□□ 0.87
MCF2L2-209ENST00000475664 SSR4P51571 173 aa20.49■□□□□ 0.87
MCF2L2-209ENST00000475664 CYLC2Q14093 348 aaPredicted RBP20.49■□□□□ 0.87
MCF2L2-209ENST00000475664 COQ5Q5HYK3 327 aa20.49■□□□□ 0.87
MCF2L2-209ENST00000475664 FAM91A1Q658Y4 838 aa20.49■□□□□ 0.87
MCF2L2-209ENST00000475664 LYPD8Q6UX82 237 aa20.49■□□□□ 0.87
MCF2L2-209ENST00000475664 IGFL3Q6UXB1 125 aa20.49■□□□□ 0.87
MCF2L2-209ENST00000475664 SLC15A4Q8N697 577 aa20.49■□□□□ 0.87
MCF2L2-209ENST00000475664 EXD3Q8N9H8 876 aa20.49■□□□□ 0.87
MCF2L2-209ENST00000475664 RP9Q8TA86 221 aaKnown RBP20.49■□□□□ 0.87
MCF2L2-209ENST00000475664 C9orf43Q8TAL5 461 aaPredicted RBP20.49■□□□□ 0.87
MCF2L2-209ENST00000475664 SLC22A8Q8TCC7 542 aa20.49■□□□□ 0.87
MCF2L2-209ENST00000475664 ZFP90Q8TF47 636 aa20.49■□□□□ 0.87
MCF2L2-209ENST00000475664 SERHL2Q9H4I8 314 aa20.49■□□□□ 0.87
MCF2L2-209ENST00000475664 RYDENQ9NUL5 291 aaKnown RBP20.49■□□□□ 0.87
MCF2L2-209ENST00000475664 SLAMF8Q9P0V8 285 aa20.49■□□□□ 0.87
MCF2L2-209ENST00000475664 ABI3Q9P2A4 366 aa20.49■□□□□ 0.87
MCF2L2-209ENST00000475664 TP53TG5Q9Y2B4 290 aa20.49■□□□□ 0.87
MCF2L2-209ENST00000475664 ZNF451Q9Y4E5 1061 aa20.49■□□□□ 0.87
MCF2L2-209ENST00000475664 PCDHB14Q9Y5E9 798 aa20.49■□□□□ 0.87
MCF2L2-209ENST00000475664 ATMQ13315 3056 aa20.49■□□□□ 0.87
MCF2L2-209ENST00000475664 TRBV5-3A0A0A0MS03 114 aa20.48■□□□□ 0.87
MCF2L2-209ENST00000475664 LOC100653049A0A140TA62 436 aa20.48■□□□□ 0.87
MCF2L2-209ENST00000475664 CDK2AP1O14519 115 aa20.48■□□□□ 0.87
MCF2L2-209ENST00000475664 TO15178 435 aa20.48■□□□□ 0.87
MCF2L2-209ENST00000475664 ACOX3O15254 700 aa20.48■□□□□ 0.87
MCF2L2-209ENST00000475664 KRT34O76011 436 aa20.48■□□□□ 0.87
MCF2L2-209ENST00000475664 NKX2-2O95096 273 aa20.48■□□□□ 0.87
MCF2L2-209ENST00000475664 KCNH1O95259 989 aa20.48■□□□□ 0.87
MCF2L2-209ENST00000475664 WDPCPO95876 746 aa20.48■□□□□ 0.87
MCF2L2-209ENST00000475664 COX4I1P13073 169 aa20.48■□□□□ 0.87
MCF2L2-209ENST00000475664 CHI3L1P36222 383 aaPredicted RBP20.48■□□□□ 0.87
MCF2L2-209ENST00000475664 ZNHIT3Q15649 155 aaPredicted RBP20.48■□□□□ 0.87
MCF2L2-209ENST00000475664 ZNF468Q5VIY5 522 aaPredicted RBP20.48■□□□□ 0.87
MCF2L2-209ENST00000475664 REP15Q6BDI9 236 aa20.48■□□□□ 0.87
MCF2L2-209ENST00000475664 CDC73Q6P1J9 531 aa20.48■□□□□ 0.87
MCF2L2-209ENST00000475664 PCSK4Q6UW60 755 aa20.48■□□□□ 0.87
MCF2L2-209ENST00000475664 DLEU7Q6UYE1 221 aa20.48■□□□□ 0.87
MCF2L2-209ENST00000475664 SLC44A2Q8IWA5 706 aaPredicted RBP20.48■□□□□ 0.87
MCF2L2-209ENST00000475664 MSRB3Q8IXL7 192 aa20.48■□□□□ 0.87
MCF2L2-209ENST00000475664 TAGAPQ8N103 731 aa20.48■□□□□ 0.87
MCF2L2-209ENST00000475664 POU5F2Q8N7G0 328 aa20.48■□□□□ 0.87
MCF2L2-209ENST00000475664 SLC16A11Q8NCK7 471 aa20.48■□□□□ 0.87
MCF2L2-209ENST00000475664 FBXO30Q8TB52 745 aa20.48■□□□□ 0.87
MCF2L2-209ENST00000475664 MIPOL1Q8TD10 442 aa20.48■□□□□ 0.87
MCF2L2-209ENST00000475664 HSPBAP1Q96EW2 488 aa20.48■□□□□ 0.87
MCF2L2-209ENST00000475664 SLC35G5Q96KT7 338 aa20.48■□□□□ 0.87
MCF2L2-209ENST00000475664 YIPF4Q9BSR8 244 aa20.48■□□□□ 0.87
MCF2L2-209ENST00000475664 ACTRT3Q9BYD9 372 aa20.48■□□□□ 0.87
MCF2L2-209ENST00000475664 SLC25A37Q9NYZ2 338 aa20.48■□□□□ 0.87
MCF2L2-209ENST00000475664 MAP10Q9P2G4 905 aa20.48■□□□□ 0.87
MCF2L2-209ENST00000475664 KRT16P08779 473 aa20.47■□□□□ 0.87
MCF2L2-209ENST00000475664 SOX3P41225 446 aa20.47■□□□□ 0.87
MCF2L2-209ENST00000475664 MAN2A2P49641 1150 aa20.47■□□□□ 0.87
MCF2L2-209ENST00000475664 ST13P50502 369 aaKnown RBP20.47■□□□□ 0.87
MCF2L2-209ENST00000475664 RPS26P62854 115 aaKnown RBP20.47■□□□□ 0.87
MCF2L2-209ENST00000475664 STX5Q13190 355 aa20.47■□□□□ 0.87
MCF2L2-209ENST00000475664 TUBA3CQ13748 450 aa20.47■□□□□ 0.87
MCF2L2-209ENST00000475664 DUSP5Q16690 384 aa20.47■□□□□ 0.87
MCF2L2-209ENST00000475664 TUBA3EQ6PEY2 450 aa20.47■□□□□ 0.87
MCF2L2-209ENST00000475664 DNAJB8Q8NHS0 232 aa20.47■□□□□ 0.87
MCF2L2-209ENST00000475664 HAS2Q92819 552 aa20.47■□□□□ 0.87
MCF2L2-209ENST00000475664 AURKBQ96GD4 344 aaPredicted RBP20.47■□□□□ 0.87
MCF2L2-209ENST00000475664 PLA2G3Q9NZ20 509 aa20.47■□□□□ 0.87
MCF2L2-209ENST00000475664 VAPAQ9P0L0 249 aa20.47■□□□□ 0.87
MCF2L2-209ENST00000475664 FAF1Q9UNN5 650 aaPredicted RBP20.47■□□□□ 0.87
MCF2L2-209ENST00000475664 LHX6Q9UPM6 363 aa20.47■□□□□ 0.87
MCF2L2-209ENST00000475664 KMT2BQ9UMN6 2715 aaPredicted RBP20.46■□□□□ 0.87
MCF2L2-209ENST00000475664 CNTRLQ7Z7A1 2325 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms