RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 YES1P07947 543 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 ZNF865P0CJ78 1059 aaPredicted RBP4.6□□□□□ -1.67
NPHP3-206ENST00000474871 MCF2P10911 925 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 HAPLN1P10915 354 aaPredicted RBP4.6□□□□□ -1.67
NPHP3-206ENST00000474871 FOLR1P15328 257 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 TAL1P17542 331 aaPredicted RBP4.6□□□□□ -1.67
NPHP3-206ENST00000474871 TAC1P20366 129 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 SDC4P31431 198 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 GGT5P36269 586 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 OR2B6P58173 313 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 RAP1BP61224 184 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 YBX1P67809 324 aaKnown RBP4.6□□□□□ -1.67
NPHP3-206ENST00000474871 MESP2Q0VG99 397 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 SNTB2Q13425 540 aaKnown RBP4.6□□□□□ -1.67
NPHP3-206ENST00000474871 TMED2Q15363 201 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 SLC9A3R2Q15599 337 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 DECR1Q16698 335 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 TMEM249Q2WGJ8 235 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 TBCELQ5QJ74 424 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 RSBN1Q5VWQ0 802 aaPredicted RBP4.6□□□□□ -1.67
NPHP3-206ENST00000474871 KHDRBS2Q5VWX1 349 aaKnown RBP4.6□□□□□ -1.67
NPHP3-206ENST00000474871 TIGD3Q6B0B8 471 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 ESRP1Q6NXG1 681 aaKnown RBP4.6□□□□□ -1.67
NPHP3-206ENST00000474871 KCTD9Q7L273 389 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 ADAT2Q7Z6V5 191 aaKnown RBP4.6□□□□□ -1.67
NPHP3-206ENST00000474871 TSPAN14Q8NG11 270 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 NTNG2Q96CW9 530 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 ZNF451Q9Y4E5 1061 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 WDR90Q96KV7 1748 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 ADGRA2Q96PE1 1338 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 LOC285556D6RIA3 1793 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 FRMPD3Q5JV73 1810 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 A0A1W2PQ45 241 aaPredicted RBP4.59□□□□□ -1.67
NPHP3-206ENST00000474871 A0A1W2PQY0 241 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 C17orf102A2RUQ5 167 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 C7orf72A4D263 438 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 FAM86C2PA6NEL3 165 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 ANKRD61A6NGH8 418 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 KLRC4O43908 158 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 NME2P1O60361 137 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 SBK2P0C263 348 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 HIST1H1BP16401 226 aaKnown RBP4.59□□□□□ -1.67
NPHP3-206ENST00000474871 GIPRP48546 466 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 CEBPDP49716 269 aaPredicted RBP4.59□□□□□ -1.67
NPHP3-206ENST00000474871 NOVA1P51513 510 aaKnown RBP4.59□□□□□ -1.67
NPHP3-206ENST00000474871 CRYBA4P53673 196 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 MAZP56270 477 aaKnown RBP4.59□□□□□ -1.67
NPHP3-206ENST00000474871 OSTNP61366 133 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 GPR17Q13304 367 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 TP53BP2Q13625 1128 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 EMC2Q15006 297 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 CTF1Q16619 201 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 RNF212Q495C1 297 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 NCMAPQ5T1S8 102 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 FAXCQ5TGI0 409 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 LRRC38Q5VT99 294 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 MBLAC2Q68D91 279 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 C3P1Q6ZMU1 363 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 PACRGLQ8N7B6 248 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 WDSUB1Q8N9V3 476 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 ITFG1Q8TB96 612 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 PCNPQ8WW12 178 aaKnown RBP4.59□□□□□ -1.67
NPHP3-206ENST00000474871 XAGE5Q8WWM1 108 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 BIRC7Q96CA5 298 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 ARSGQ96EG1 525 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 ZNF597Q96LX8 424 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 TGM7Q96PF1 710 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 GAL3ST4Q96RP7 486 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 CITED1Q99966 193 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 ACE2Q9BYF1 805 aaPredicted RBP4.59□□□□□ -1.67
NPHP3-206ENST00000474871 SDCBP2Q9H190 292 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 IGFLR1Q9H665 355 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 ZFYVE1Q9HBF4 777 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 ENTPD7Q9NQZ7 604 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 COPZ2Q9P299 210 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 LGALS16A8MUM7 142 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 SHISA8B8ZZ34 492 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 H0Y8G0 127 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 OGG1O15527 345 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 GRID2O43424 1007 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 LRCH4O75427 683 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 PAPSS2O95340 614 aaPredicted RBP4.59□□□□□ -1.67
NPHP3-206ENST00000474871 ZNF44P15621 663 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 ZNF10P21506 573 aaPredicted RBP4.59□□□□□ -1.67
NPHP3-206ENST00000474871 YWHABP31946 246 aaKnown RBP4.59□□□□□ -1.67
NPHP3-206ENST00000474871 ZP1P60852 638 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 HERV-K104P63124 156 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 PUDPQ08623 228 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 ZNF235Q14590 738 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 TBCEQ15813 527 aaPredicted RBP4.59□□□□□ -1.67
NPHP3-206ENST00000474871 GUCA2BQ16661 112 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 WBP2NLQ6ICG8 309 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 MOXD1Q6UVY6 613 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 FAM183BPQ6ZVS7 135 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 SLC35D2Q76EJ3 337 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 CLNKQ7Z7G1 428 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 ADPRHL1Q8NDY3 354 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 FAM83FQ8NEG4 500 aaPredicted RBP4.59□□□□□ -1.67
NPHP3-206ENST00000474871 SLC7A6Q92536 515 aa4.59□□□□□ -1.67
NPHP3-206ENST00000474871 GHSRQ92847 366 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms