RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 TAMM41Q96BW9 452 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 SLC35A4Q96G79 324 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 C16orf58Q96GQ5 468 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 LIN37Q96GY3 246 aaPredicted RBP6.17□□□□□ -1.42
ATG4A-207ENST00000474825 CENPNQ96H22 339 aaPredicted RBP6.17□□□□□ -1.42
ATG4A-207ENST00000474825 TMEM19Q96HH6 336 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 VSTM2LQ96N03 204 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 PSMG3-AS1Q96PY0 264 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 TRNT1Q96Q11 434 aaKnown RBP6.17□□□□□ -1.42
ATG4A-207ENST00000474825 OR7D2Q96RA2 312 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 SPOCK3Q9BQ16 436 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 LMF2Q9BU23 707 aaKnown RBP6.17□□□□□ -1.42
ATG4A-207ENST00000474825 DOHHQ9BU89 302 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 CHID1Q9BWS9 393 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 BTBD2Q9BX70 525 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 ALOXE3Q9BYJ1 711 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 SPRY4Q9C004 299 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 B3GNT4Q9C0J1 378 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 YY1AP1Q9H869 796 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 NTN4Q9HB63 628 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 DUSP22Q9NRW4 184 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 C14orf105Q9NVL8 296 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 DDX18Q9NVP1 670 aaKnown RBP6.17□□□□□ -1.42
ATG4A-207ENST00000474825 P2RX2Q9UBL9 471 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 PPIEQ9UNP9 301 aaKnown RBP6.17□□□□□ -1.42
ATG4A-207ENST00000474825 SATB2Q9UPW6 733 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 CLCA2Q9UQC9 943 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 PADI2Q9Y2J8 665 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 PCDHGA3Q9Y5H0 932 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 GPC6Q9Y625 555 aaPredicted RBP6.17□□□□□ -1.42
ATG4A-207ENST00000474825 NUP214P35658 2090 aaPredicted RBP6.17□□□□□ -1.42
ATG4A-207ENST00000474825 GVINP1Q7Z2Y8 2422 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 WDFY3Q8IZQ1 3526 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 CFAP54Q96N23 3096 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 A0A1W2PQ72 361 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 C4orf47A7E2U8 309 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 EFCAB7A8K855 629 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 M0QX08 132 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 MEN1O00255 615 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 SLC30A4O14863 429 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 TM4SF5O14894 197 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 POLR1CO15160 346 aaPredicted RBP6.16□□□□□ -1.42
ATG4A-207ENST00000474825 ACOX3O15254 700 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 CPNE3O75131 537 aaKnown RBP6.16□□□□□ -1.42
ATG4A-207ENST00000474825 COQ9O75208 318 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 JRKO75564 520 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 PDE9AO76083 593 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 BAG2O95816 211 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 AK1P00568 194 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 CHRM4P08173 479 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 OR12D1P0DN82 309 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 ACP2P11117 423 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 CCL4P13236 92 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 ZNF26P17031 533 aaPredicted RBP6.16□□□□□ -1.42
ATG4A-207ENST00000474825 CD247P20963 164 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 NT5EP21589 574 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 ALAS2P22557 587 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 FASP25445 335 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 KCNJ5P48544 419 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 EMDP50402 254 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 GPR143P51810 404 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 CRISP3P54108 245 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 RAB15P59190 212 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 RPS26P62854 115 aaKnown RBP6.16□□□□□ -1.42
ATG4A-207ENST00000474825 DCDP81605 110 aaKnown RBP6.16□□□□□ -1.42
ATG4A-207ENST00000474825 MRPS35P82673 323 aaKnown RBP6.16□□□□□ -1.42
ATG4A-207ENST00000474825 ID2Q02363 134 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 CHRNB3Q05901 458 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 STX4Q12846 297 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 SLC13A2Q13183 592 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 TP53BP2Q13625 1128 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 ERV3-1Q14264 604 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 LASP1Q14847 261 aaKnown RBP6.16□□□□□ -1.42
ATG4A-207ENST00000474825 ELAVL1Q15717 326 aaKnown RBP6.16□□□□□ -1.42
ATG4A-207ENST00000474825 ISXQ2M1V0 245 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 ARHGAP11BQ3KRB8 267 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 CYBRD1Q53TN4 286 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 PHF19Q5T6S3 580 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 PPP4R4Q6NUP7 873 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 TNFAIP8L2Q6P589 184 aaPredicted RBP6.16□□□□□ -1.42
ATG4A-207ENST00000474825 ARMC8Q8IUR7 673 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 GALNT12Q8IXK2 581 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 VWA5B2Q8N398 1253 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 PACRGLQ8N7B6 248 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 SLC16A11Q8NCK7 471 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 SIMC1Q8NDZ2 872 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 GPR32P1Q8NGA4 272 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 OR5D16Q8NGK9 328 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 BBS10Q8TAM1 723 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 FBXO30Q8TB52 745 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 STT3BQ8TCJ2 826 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 OIT3Q8WWZ8 545 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 RAB8BQ92930 207 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 RIT1Q92963 219 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 PPWD1Q96BP3 646 aaKnown RBP6.16□□□□□ -1.42
ATG4A-207ENST00000474825 RBM18Q96H35 190 aaKnown RBP6.16□□□□□ -1.42
ATG4A-207ENST00000474825 FBXL20Q96IG2 436 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 DGAT2Q96PD7 388 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 CTRCQ99895 268 aa6.16□□□□□ -1.42
ATG4A-207ENST00000474825 TREX2Q9BQ50 279 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms