RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, human

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSS-208	ENST00000474319	CDCA4	Q9BXL8	241 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	SERHL2	Q9H4I8	314 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	KLHL31	Q9H511	634 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	FKBP14	Q9NWM8	211 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	PTGFRN	Q9P2B2	879 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	ZNF624	Q9P2J8	865 aa	Predicted RBP	10.12	□□□□□ -0.79
LSS-208	ENST00000474319	GPR55	Q9Y2T6	319 aa	Predicted RBP	10.12	□□□□□ -0.79
LSS-208	ENST00000474319	ALG5	Q9Y673	324 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	PLXNA3	P51805	1871 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	NPIPA5	A0A0B4J1W7	369 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319		A0A0B4J203	849 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	FAM170B	A6NMN3	283 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	NPIPA7	E9PJI5	369 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	ZNF670-ZNF695	F2Z2N8	137 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	PGRMC2	O15173	223 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	REM1	O75628	298 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	NPIPA8	P0DM63	369 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	PRKCA	P17252	672 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	GIPR	P48546	466 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	SRP9	P49458	86 aa	Known RBP	10.12	□□□□□ -0.79
LSS-208	ENST00000474319	OR8J1	Q8NGP2	316 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	TRMT2B	Q96GJ1	504 aa	Known RBP	10.12	□□□□□ -0.79
LSS-208	ENST00000474319	ZNF582	Q96NG8	517 aa	Predicted RBP	10.12	□□□□□ -0.79
LSS-208	ENST00000474319	HHIP	Q96QV1	700 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	LYSMD1	Q96S90	227 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	RNF121	Q9H920	327 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	BRF2	Q9HAW0	419 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	ANKH	Q9HCJ1	492 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	ITGB1BP2	Q9UKP3	347 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	HCN2	Q9UL51	889 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	ZFR2	Q9UPR6	939 aa	Known RBP	10.12	□□□□□ -0.79
LSS-208	ENST00000474319	TRANK1	O15050	2925 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	VPS13A	Q96RL7	3174 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	OR52A4P	A6NMU1	304 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	C12orf71	A8MTZ7	269 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	PLA2G10	O15496	165 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	NARS	O43776	548 aa	Known RBP	10.12	□□□□□ -0.79
LSS-208	ENST00000474319	LCMT2	O60294	686 aa	Known RBP	10.12	□□□□□ -0.79
LSS-208	ENST00000474319	PIP5K1C	O60331	668 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	LILRB3	O75022	631 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	ACP5	P13686	325 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	UQCRC2	P22695	453 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	CPN2	P22792	545 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	GDI1	P31150	447 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	EEF1A2	Q05639	463 aa	Known RBP	10.12	□□□□□ -0.79
LSS-208	ENST00000474319	DHCR24	Q15392	516 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	FAM78A	Q5JUQ0	283 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	TANGO2	Q6ICL3	276 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	HTR3D	Q70Z44	454 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	RD3	Q7Z3Z2	195 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	SLC9B2	Q86UD5	537 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	ZNF547	Q8IVP9	402 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	TRAM1L1	Q8N609	369 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	GRPEL2	Q8TAA5	225 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	SMPDL3A	Q92484	453 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	DNAJA3	Q96EY1	480 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	SLC35G5	Q96KT7	338 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	ZFP3	Q96NJ6	502 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	EFCAB11	Q9BUY7	163 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	LGR4	Q9BXB1	951 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	OR51V1	Q9H2C8	321 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	B3GAT2	Q9NPZ5	323 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	PLEKHM1	Q9Y4G2	1056 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	NCOR1	O75376	2440 aa		10.11	□□□□□ -0.79
LSS-208	ENST00000474319	SHISA3	A0PJX4	238 aa		10.11	□□□□□ -0.79
LSS-208	ENST00000474319	STK25	O00506	426 aa		10.11	□□□□□ -0.79
LSS-208	ENST00000474319	SLC30A4	O14863	429 aa		10.11	□□□□□ -0.79
LSS-208	ENST00000474319	SLC16A5	O15375	505 aa		10.11	□□□□□ -0.79
LSS-208	ENST00000474319	MAT2A	P31153	395 aa	Known RBP	10.11	□□□□□ -0.79
LSS-208	ENST00000474319	HOXD11	P31277	338 aa	Predicted RBP	10.11	□□□□□ -0.79
LSS-208	ENST00000474319	AHR	P35869	848 aa		10.11	□□□□□ -0.79
LSS-208	ENST00000474319	GALK2	Q01415	458 aa		10.11	□□□□□ -0.79
LSS-208	ENST00000474319	DLX2	Q07687	328 aa	Predicted RBP	10.11	□□□□□ -0.79
LSS-208	ENST00000474319	LTB4R	Q15722	352 aa		10.11	□□□□□ -0.79
LSS-208	ENST00000474319	CCNJ	Q5T5M9	372 aa		10.11	□□□□□ -0.79
LSS-208	ENST00000474319	PRICKLE2	Q7Z3G6	844 aa		10.11	□□□□□ -0.79
LSS-208	ENST00000474319	UBE2Q1	Q7Z7E8	422 aa		10.11	□□□□□ -0.79
LSS-208	ENST00000474319	TMEFF1	Q8IYR6	380 aa		10.11	□□□□□ -0.79
LSS-208	ENST00000474319	IZUMO1	Q8IYV9	350 aa		10.11	□□□□□ -0.79
LSS-208	ENST00000474319	OR51L1	Q8NGJ5	315 aa		10.11	□□□□□ -0.79
LSS-208	ENST00000474319	TEX47	Q8TBZ9	253 aa		10.11	□□□□□ -0.79
LSS-208	ENST00000474319	CREB3L4	Q8TEY5	395 aa		10.11	□□□□□ -0.79
LSS-208	ENST00000474319	HERVK_113	Q902F9	699 aa		10.11	□□□□□ -0.79
LSS-208	ENST00000474319	TBC1D20	Q96BZ9	403 aa		10.11	□□□□□ -0.79
LSS-208	ENST00000474319	DEC1	Q9P2X7	70 aa		10.11	□□□□□ -0.79
LSS-208	ENST00000474319	PLEKHB1	Q9UF11	243 aa	Predicted RBP	10.11	□□□□□ -0.79
LSS-208	ENST00000474319	ARID1A	O14497	2285 aa		10.11	□□□□□ -0.79
LSS-208	ENST00000474319	SOCS6	O14544	535 aa		10.11	□□□□□ -0.79
LSS-208	ENST00000474319	RAB36	O95755	333 aa		10.11	□□□□□ -0.79
LSS-208	ENST00000474319	HMGN2	P05204	90 aa	Known RBP	10.11	□□□□□ -0.79
LSS-208	ENST00000474319	GYPB	P06028	91 aa		10.11	□□□□□ -0.79
LSS-208	ENST00000474319	PRLHR	P49683	370 aa		10.11	□□□□□ -0.79
LSS-208	ENST00000474319	CDH11	P55287	796 aa		10.11	□□□□□ -0.79
LSS-208	ENST00000474319	SLC3A1	Q07837	685 aa		10.11	□□□□□ -0.79
LSS-208	ENST00000474319	ZSWIM7	Q19AV6	140 aa		10.11	□□□□□ -0.79
LSS-208	ENST00000474319	ZNF770	Q6IQ21	691 aa	Predicted RBP	10.11	□□□□□ -0.79
LSS-208	ENST00000474319	ARL9	Q6T311	187 aa		10.11	□□□□□ -0.79
LSS-208	ENST00000474319	CHRDL2	Q6WN34	429 aa		10.11	□□□□□ -0.79
LSS-208	ENST00000474319	ESPNL	Q6ZVH7	1005 aa		10.11	□□□□□ -0.79
LSS-208	ENST00000474319	PGBD3	Q8N328	593 aa		10.11	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms