RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 PCDHGB3Q9Y5G1 929 aa18.52■□□□□ 0.56
APP-215ENST00000474136 SERTM1A2A2V5 107 aa18.51■□□□□ 0.55
APP-215ENST00000474136 LRIT2A6NDA9 550 aa18.51■□□□□ 0.55
APP-215ENST00000474136 C17orf105B2RV13 164 aa18.51■□□□□ 0.55
APP-215ENST00000474136 CTNSO60931 367 aa18.51■□□□□ 0.55
APP-215ENST00000474136 ETHE1O95571 254 aa18.51■□□□□ 0.55
APP-215ENST00000474136 EPPINO95925 133 aa18.51■□□□□ 0.55
APP-215ENST00000474136 LIM2P55344 173 aa18.51■□□□□ 0.55
APP-215ENST00000474136 KCNJ2P63252 427 aa18.51■□□□□ 0.55
APP-215ENST00000474136 ID2Q02363 134 aa18.51■□□□□ 0.55
APP-215ENST00000474136 CPSF6Q16630 551 aaKnown RBP eCLIP18.51■□□□□ 0.55
APP-215ENST00000474136 ZNF791Q3KP31 576 aaPredicted RBP18.51■□□□□ 0.55
APP-215ENST00000474136 UGT3A2Q3SY77 523 aa18.51■□□□□ 0.55
APP-215ENST00000474136 PIGGQ5H8A4 983 aa18.51■□□□□ 0.55
APP-215ENST00000474136 SHEQ5VZ18 495 aa18.51■□□□□ 0.55
APP-215ENST00000474136 SLC22A10Q63ZE4 541 aa18.51■□□□□ 0.55
APP-215ENST00000474136 FRG2Q64ET8 278 aa18.51■□□□□ 0.55
APP-215ENST00000474136 TMIGD1Q6UXZ0 262 aa18.51■□□□□ 0.55
APP-215ENST00000474136 SPATA21Q7Z572 469 aa18.51■□□□□ 0.55
APP-215ENST00000474136 CXorf67Q86X51 503 aaPredicted RBP18.51■□□□□ 0.55
APP-215ENST00000474136 OR5L2Q8NGL0 311 aa18.51■□□□□ 0.55
APP-215ENST00000474136 BCAS4Q8TDM0 211 aa18.51■□□□□ 0.55
APP-215ENST00000474136 FRG2BQ96QU4 278 aa18.51■□□□□ 0.55
APP-215ENST00000474136 ELAC2Q9BQ52 826 aaKnown RBP18.51■□□□□ 0.55
APP-215ENST00000474136 YIPF4Q9BSR8 244 aa18.51■□□□□ 0.55
APP-215ENST00000474136 ZFP64Q9NPA5 681 aa18.51■□□□□ 0.55
APP-215ENST00000474136 BEX4Q9NWD9 120 aaPredicted RBP18.51■□□□□ 0.55
APP-215ENST00000474136 ZNF629Q9UEG4 869 aaPredicted RBP18.51■□□□□ 0.55
APP-215ENST00000474136 MARCOQ9UEW3 520 aaPredicted RBP18.51■□□□□ 0.55
APP-215ENST00000474136 DNAJC15Q9Y5T4 150 aa18.51■□□□□ 0.55
APP-215ENST00000474136 RTTNQ86VV8 2226 aa18.51■□□□□ 0.55
APP-215ENST00000474136 NDUFAB1O14561 156 aa18.5■□□□□ 0.55
APP-215ENST00000474136 SNX3O60493 162 aa18.5■□□□□ 0.55
APP-215ENST00000474136 LDB3O75112 727 aa18.5■□□□□ 0.55
APP-215ENST00000474136 LRATO95237 230 aa18.5■□□□□ 0.55
APP-215ENST00000474136 TBX6O95947 436 aaPredicted RBP18.5■□□□□ 0.55
APP-215ENST00000474136 HRGP04196 525 aa18.5■□□□□ 0.55
APP-215ENST00000474136 HSD3B1P14060 373 aa18.5■□□□□ 0.55
APP-215ENST00000474136 HSD3B2P26439 372 aa18.5■□□□□ 0.55
APP-215ENST00000474136 STX4Q12846 297 aa18.5■□□□□ 0.55
APP-215ENST00000474136 CLEC6AQ6EIG7 209 aa18.5■□□□□ 0.55
APP-215ENST00000474136 LYPD8Q6UX82 237 aa18.5■□□□□ 0.55
APP-215ENST00000474136 PIGWQ7Z7B1 504 aa18.5■□□□□ 0.55
APP-215ENST00000474136 KIF18BQ86Y91 864 aa18.5■□□□□ 0.55
APP-215ENST00000474136 LAS2Q8IYD9 372 aa18.5■□□□□ 0.55
APP-215ENST00000474136 LRRC25Q8N386 305 aaPredicted RBP18.5■□□□□ 0.55
APP-215ENST00000474136 LIX1Q8N485 282 aa18.5■□□□□ 0.55
APP-215ENST00000474136 GBP7Q8N8V2 638 aaPredicted RBP18.5■□□□□ 0.55
APP-215ENST00000474136 ZNF721Q8TF20 911 aa18.5■□□□□ 0.55
APP-215ENST00000474136 TWIST2Q8WVJ9 160 aa18.5■□□□□ 0.55
APP-215ENST00000474136 COX4I2Q96KJ9 171 aa18.5■□□□□ 0.55
APP-215ENST00000474136 JSRP1Q96MG2 331 aaPredicted RBP18.5■□□□□ 0.55
APP-215ENST00000474136 ACKR4Q9NPB9 350 aa18.5■□□□□ 0.55
APP-215ENST00000474136 NMRK1Q9NWW6 199 aa18.5■□□□□ 0.55
APP-215ENST00000474136 BOKQ9UMX3 212 aaPredicted RBP18.5■□□□□ 0.55
APP-215ENST00000474136 DAPP1Q9UN19 280 aa18.5■□□□□ 0.55
APP-215ENST00000474136 FIS1Q9Y3D6 152 aa18.5■□□□□ 0.55
APP-215ENST00000474136 NCKAP5O14513 1909 aa18.5■□□□□ 0.55
APP-215ENST00000474136 TLN2Q9Y4G6 2542 aa18.5■□□□□ 0.55
APP-215ENST00000474136 C15orf38-AP3S2A0A0A6YYH1 394 aa18.49■□□□□ 0.55
APP-215ENST00000474136 FAM171A2A8MVW0 826 aa18.49■□□□□ 0.55
APP-215ENST00000474136 AHRRA9YTQ3 701 aa18.49■□□□□ 0.55
APP-215ENST00000474136 H7C1Q1 480 aa18.49■□□□□ 0.55
APP-215ENST00000474136 SLC28A1O00337 649 aa18.49■□□□□ 0.55
APP-215ENST00000474136 MANBAO00462 879 aa18.49■□□□□ 0.55
APP-215ENST00000474136 PRAMEF4O60810 478 aa18.49■□□□□ 0.55
APP-215ENST00000474136 TIMP3P35625 211 aa18.49■□□□□ 0.55
APP-215ENST00000474136 PIK3CBP42338 1070 aa18.49■□□□□ 0.55
APP-215ENST00000474136 AQP5P55064 265 aa18.49■□□□□ 0.55
APP-215ENST00000474136 SLBPQ14493 270 aaKnown RBP eCLIP18.49■□□□□ 0.55
APP-215ENST00000474136 MPEG1Q2M385 716 aa18.49■□□□□ 0.55
APP-215ENST00000474136 PRAMEF9Q5VWM5 478 aa18.49■□□□□ 0.55
APP-215ENST00000474136 ADNP2Q6IQ32 1131 aa18.49■□□□□ 0.55
APP-215ENST00000474136 CXXC5Q7LFL8 322 aaKnown RBP18.49■□□□□ 0.55
APP-215ENST00000474136 TRIM46Q7Z4K8 759 aa18.49■□□□□ 0.55
APP-215ENST00000474136 VN1R5Q7Z5H4 357 aa18.49■□□□□ 0.55
APP-215ENST00000474136 ANKS4BQ8N8V4 417 aa18.49■□□□□ 0.55
APP-215ENST00000474136 OR7G3Q8NG95 312 aa18.49■□□□□ 0.55
APP-215ENST00000474136 PAQR8Q8TEZ7 354 aa18.49■□□□□ 0.55
APP-215ENST00000474136 SELENOMQ8WWX9 145 aa18.49■□□□□ 0.55
APP-215ENST00000474136 NANOS1Q8WY41 292 aaKnown RBP18.49■□□□□ 0.55
APP-215ENST00000474136 MEAF6Q9HAF1 191 aa18.49■□□□□ 0.55
APP-215ENST00000474136 BRF2Q9HAW0 419 aa18.49■□□□□ 0.55
APP-215ENST00000474136 TNFRSF12AQ9NP84 129 aa18.49■□□□□ 0.55
APP-215ENST00000474136 TIMM22Q9Y584 194 aa18.49■□□□□ 0.55
APP-215ENST00000474136 FBN1P35555 2871 aaKnown RBP18.49■□□□□ 0.55
APP-215ENST00000474136 COL6A5A8TX70 2615 aa18.49■□□□□ 0.55
APP-215ENST00000474136 KIAA1549Q9HCM3 1950 aa18.49■□□□□ 0.55
APP-215ENST00000474136 ANKDD1BA6NHY2 528 aa18.49■□□□□ 0.55
APP-215ENST00000474136 EEF1E1-BLOC1S5C9J1V9 151 aa18.49■□□□□ 0.55
APP-215ENST00000474136 FOXE1O00358 373 aaPredicted RBP18.49■□□□□ 0.55
APP-215ENST00000474136 EEF1E1O43324 174 aaKnown RBP18.49■□□□□ 0.55
APP-215ENST00000474136 IL2RAP01589 272 aa18.49■□□□□ 0.55
APP-215ENST00000474136 PCSK2P16519 638 aa18.49■□□□□ 0.55
APP-215ENST00000474136 ARFIP2P53365 341 aa18.49■□□□□ 0.55
APP-215ENST00000474136 FOXA1P55317 472 aa18.49■□□□□ 0.55
APP-215ENST00000474136 CRYZQ08257 329 aaKnown RBP18.49■□□□□ 0.55
APP-215ENST00000474136 CSTF3Q12996 717 aaKnown RBP18.49■□□□□ 0.55
APP-215ENST00000474136 DUSP8Q13202 625 aa18.49■□□□□ 0.55
APP-215ENST00000474136 Q5PR19 223 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms