RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 SYNJ2O15056 1496 aa3.6□□□□□ -1.83
BRCA1-212ENST00000473961 HECW1Q76N89 1606 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 CFAP43Q8NDM7 1665 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 A0A0A6YYD4 124 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 C15orf38-AP3S2A0A0A6YYH1 394 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 A0A0J9YVX5 310 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 GSAPA4D1B5 854 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 WASHC1A8K0Z3 465 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 NPIPA2E9PIF3 369 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 CLDN5O00501 218 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 ALOX15BO15296 676 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 NXPH4O95158 308 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 CLDN1O95832 211 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 ECDO95905 644 aaPredicted RBP3.59□□□□□ -1.83
BRCA1-212ENST00000473961 MBD3O95983 291 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 OPN1MWP04001 364 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 ZNF853P0CG23 659 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 GSTT2P0CG29 244 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 GSTT2BP0CG30 244 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 OPN1MW2P0DN77 364 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 OPN1MW3P0DN78 364 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 ZNF26P17031 533 aaPredicted RBP3.59□□□□□ -1.83
BRCA1-212ENST00000473961 ID1P41134 155 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 PTGFRP43088 359 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 TDO2P48775 406 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 RIDAP52758 137 aaKnown RBP3.59□□□□□ -1.83
BRCA1-212ENST00000473961 GSCP56915 257 aaPredicted RBP3.59□□□□□ -1.83
BRCA1-212ENST00000473961 SRPXP78539 464 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 FASTKD3Q14CZ7 662 aaKnown RBP3.59□□□□□ -1.83
BRCA1-212ENST00000473961 TRIP10Q15642 601 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 ZKSCAN8Q15776 578 aaPredicted RBP3.59□□□□□ -1.83
BRCA1-212ENST00000473961 PDK4Q16654 411 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 KNOP1Q1ED39 458 aaKnown RBP3.59□□□□□ -1.83
BRCA1-212ENST00000473961 ZFP69Q49AA0 526 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 TCHHL1Q5QJ38 904 aaPredicted RBP3.59□□□□□ -1.83
BRCA1-212ENST00000473961 MUC21Q5SSG8 566 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 DMKNQ6E0U4 476 aaPredicted RBP3.59□□□□□ -1.83
BRCA1-212ENST00000473961 MOB2Q70IA6 237 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 NET1Q7Z628 596 aaPredicted RBP3.59□□□□□ -1.83
BRCA1-212ENST00000473961 LUZP1Q86V48 1076 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 ZFAND4Q86XD8 727 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 ARFGAP2Q8N6H7 521 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 BANPQ8N9N5 519 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 MCHR2Q969V1 340 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 ERP44Q9BS26 406 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 MOB1AQ9H8S9 216 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 WDR41Q9HAD4 459 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 PALMDQ9NP74 551 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 C1orf123Q9NWV4 160 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 THYN1Q9P016 225 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 GHRLQ9UBU3 117 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 PURGQ9UJV8 347 aaKnown RBP3.59□□□□□ -1.83
BRCA1-212ENST00000473961 EMCNQ9ULC0 261 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 MGAT4AQ9UM21 535 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 RNF6Q9Y252 685 aa3.59□□□□□ -1.83
BRCA1-212ENST00000473961 V9GYY5 206 aaPredicted RBP3.59□□□□□ -1.83
BRCA1-212ENST00000473961 SF3B1O75533 1304 aaKnown RBP eCLIP3.59□□□□□ -1.833e-17■■■■■ 109.4
BRCA1-212ENST00000473961 RTEL1-TNFRSF6BF6WH68 1400 aa3.59□□□□□ -1.84
BRCA1-212ENST00000473961 NAIPQ13075 1403 aa3.59□□□□□ -1.84
BRCA1-212ENST00000473961 IGLV7-46A0A075B6I9 117 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 IGHV3-20A0A0C4DH32 117 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 RNF222A6NCQ9 220 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 LRIT2A6NDA9 550 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 IGLON5A6NGN9 336 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 ERICH4A6NGS2 130 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 LANCL1O43813 399 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 JAK2O60674 1132 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 KIAA0754O94854 1291 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 NUDT14O95848 222 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 HPRP00739 348 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 HSD17B1P14061 328 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 H2AFXP16104 143 aaPredicted RBP3.58□□□□□ -1.84
BRCA1-212ENST00000473961 TSPAN8P19075 237 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 ATP6V1C1P21283 382 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 TRIM23P36406 574 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 TPM4P67936 248 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 MRPS6P82932 125 aaKnown RBP3.58□□□□□ -1.84
BRCA1-212ENST00000473961 NCBP1Q09161 790 aaKnown RBP3.58□□□□□ -1.84
BRCA1-212ENST00000473961 SNTB2Q13425 540 aaKnown RBP3.58□□□□□ -1.84
BRCA1-212ENST00000473961 EXOSC2Q13868 293 aaKnown RBP3.58□□□□□ -1.84
BRCA1-212ENST00000473961 EIF2B1Q14232 305 aaKnown RBP3.58□□□□□ -1.84
BRCA1-212ENST00000473961 MOGAT2Q3SYC2 334 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 USH1GQ495M9 461 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 ARHGAP11AQ6P4F7 1023 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 CBLN3Q6UW01 205 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 ATRAIDQ6UW56 229 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 TSEN54Q7Z6J9 526 aaKnown RBP3.58□□□□□ -1.84
BRCA1-212ENST00000473961 ZDHHC21Q8IVQ6 265 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 EFCAB13Q8IY85 973 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 ZNF614Q8N883 585 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 SAMD12Q8N8I0 201 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 CHDHQ8NE62 594 aaPredicted RBP3.58□□□□□ -1.84
BRCA1-212ENST00000473961 OR5AU1Q8NGC0 362 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 ZNF606Q8WXB4 792 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 C11orf52Q96A22 123 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 CNRIP1Q96F85 164 aaPredicted RBP3.58□□□□□ -1.84
BRCA1-212ENST00000473961 RBM18Q96H35 190 aaKnown RBP3.58□□□□□ -1.84
BRCA1-212ENST00000473961 AKR1E2Q96JD6 320 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 SENP8Q96LD8 212 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 AGAP4Q96P64 663 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms