RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 DSPPQ9NZW4 1301 aa16.81■□□□□ 0.28
VARS2-206ENST00000473916 A0A0G2JPF8 293 aa16.81■□□□□ 0.28
VARS2-206ENST00000473916 TRBV4-1A0A0J9YWV2 114 aa16.81■□□□□ 0.28
VARS2-206ENST00000473916 A0A1B0GTQ1 180 aa16.81■□□□□ 0.28
VARS2-206ENST00000473916 HNRNPCL2B2RXH8 293 aa16.81■□□□□ 0.28
VARS2-206ENST00000473916 HNRNPCL3B7ZW38 293 aa16.81■□□□□ 0.28
VARS2-206ENST00000473916 HNRNPCL4P0DMR1 293 aa16.81■□□□□ 0.28
VARS2-206ENST00000473916 ITGAMP11215 1152 aa16.81■□□□□ 0.28
VARS2-206ENST00000473916 POU2F1P14859 743 aa16.81■□□□□ 0.28
VARS2-206ENST00000473916 ETS2P15036 469 aa16.81■□□□□ 0.28
VARS2-206ENST00000473916 AGXTP21549 392 aa16.81■□□□□ 0.28
VARS2-206ENST00000473916 HSD11B2P80365 405 aa16.81■□□□□ 0.28
VARS2-206ENST00000473916 CD47Q08722 323 aa16.81■□□□□ 0.28
VARS2-206ENST00000473916 MICAQ29983 383 aa16.81■□□□□ 0.28
VARS2-206ENST00000473916 RFX4Q33E94 735 aa16.81■□□□□ 0.28
VARS2-206ENST00000473916 LIN52Q52LA3 116 aa16.81■□□□□ 0.28
VARS2-206ENST00000473916 ZNF691Q5VV52 312 aa16.81■□□□□ 0.28
VARS2-206ENST00000473916 HEPHL1Q6MZM0 1159 aa16.81■□□□□ 0.28
VARS2-206ENST00000473916 FRRS1Q6ZNA5 592 aa16.81■□□□□ 0.28
VARS2-206ENST00000473916 THAP5Q7Z6K1 395 aa16.81■□□□□ 0.28
VARS2-206ENST00000473916 OR6T1Q8NGN1 323 aa16.81■□□□□ 0.28
VARS2-206ENST00000473916 OR1L3Q8NH93 324 aa16.81■□□□□ 0.28
VARS2-206ENST00000473916 SAP25Q8TEE9 199 aa16.81■□□□□ 0.28
VARS2-206ENST00000473916 TRNT1Q96Q11 434 aaKnown RBP16.81■□□□□ 0.28
VARS2-206ENST00000473916 CAPN10Q9HC96 672 aa16.81■□□□□ 0.28
VARS2-206ENST00000473916 CTPS2Q9NRF8 586 aa16.81■□□□□ 0.28
VARS2-206ENST00000473916 FBXO34Q9NWN3 711 aa16.81■□□□□ 0.28
VARS2-206ENST00000473916 NLGN3Q9NZ94 848 aa16.81■□□□□ 0.28
VARS2-206ENST00000473916 DHCR7Q9UBM7 475 aaKnown RBP16.81■□□□□ 0.28
VARS2-206ENST00000473916 MN1Q10571 1320 aaPredicted RBP16.81■□□□□ 0.28
VARS2-206ENST00000473916 FITM1A5D6W6 292 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 SLC16A6O15403 523 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 OR10H2O60403 315 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 PLOD3O60568 738 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 OR2B3O76000 313 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 CBX7O95931 251 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 GPR3P46089 330 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 OR1D4P47884 311 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 GSSP48637 474 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 RNF144AP50876 292 aaPredicted RBP16.8■□□□□ 0.28
VARS2-206ENST00000473916 TPD52P55327 224 aaPredicted RBP16.8■□□□□ 0.28
VARS2-206ENST00000473916 PIN1Q13526 163 aaPredicted RBP16.8■□□□□ 0.28
VARS2-206ENST00000473916 NR1D2Q14995 579 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 SEC23BQ15437 767 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 NADK2Q4G0N4 442 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 KCTD21Q4G0X4 260 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 PERM1Q5SV97 790 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 ATAD3BQ5T9A4 648 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 TTLL10Q6ZVT0 673 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 PLXDC1Q8IUK5 500 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 CCDC71Q8IV32 467 aaPredicted RBP16.8■□□□□ 0.28
VARS2-206ENST00000473916 CTHRC1Q96CG8 243 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 BTBD2Q9BX70 525 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 CHRNA10Q9GZZ6 450 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 ING2Q9H160 280 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 NMNAT1Q9HAN9 279 aaPredicted RBP16.8■□□□□ 0.28
VARS2-206ENST00000473916 ASCC3Q8N3C0 2202 aaKnown RBP16.8■□□□□ 0.28
VARS2-206ENST00000473916 CPED1A4D0V7 1026 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 CLDN24A6NM45 220 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 SIGLEC6O43699 453 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 PABPC4LP0CB38 370 aaKnown RBP16.8■□□□□ 0.28
VARS2-206ENST00000473916 SLC35E2P0CK97 266 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 ISL1P61371 349 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 NPTX1Q15818 432 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 INAVAQ3KP66 663 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 TCTE1Q5JU00 501 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 CHDHQ8NE62 594 aaPredicted RBP16.8■□□□□ 0.28
VARS2-206ENST00000473916 OR52R1Q8NGF1 315 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 OR51Q1Q8NH59 317 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 CNIH3Q8TBE1 160 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 ZNF675Q8TD23 568 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 PHF10Q8WUB8 498 aaKnown RBP16.8■□□□□ 0.28
VARS2-206ENST00000473916 ALPK1Q96QP1 1244 aa16.8■□□□□ 0.28
VARS2-206ENST00000473916 DNAAF2Q9NVR5 837 aaKnown RBP16.8■□□□□ 0.28
VARS2-206ENST00000473916 A0A087WV62 115 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 TRIM64A6NGJ6 449 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 TPST2O60704 377 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 LGI1O95970 557 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 ALPPP05187 535 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 RPL5P46777 297 aaKnown RBP16.79■□□□□ 0.28
VARS2-206ENST00000473916 ARL4DP49703 201 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 HMGA2P52926 109 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 GNA13Q14344 377 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 GRM7Q14831 915 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 ZNF311Q5JNZ3 666 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 FGD3Q5JSP0 725 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 EXOSC6Q5RKV6 272 aaKnown RBP16.79■□□□□ 0.28
VARS2-206ENST00000473916 GARNL3Q5VVW2 1013 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 LAIR1Q6GTX8 287 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 TYW3Q6IPR3 259 aaKnown RBP16.79■□□□□ 0.28
VARS2-206ENST00000473916 ZC3H14Q6PJT7 736 aaKnown RBP16.79■□□□□ 0.28
VARS2-206ENST00000473916 VWA5B2Q8N398 1253 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 OR6C4Q8NGE1 309 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 RASSF5Q8WWW0 418 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 UBE2FQ969M7 185 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 ALOXE3Q9BYJ1 711 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 GAREM1Q9H706 876 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 CXorf21Q9HAI6 301 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 CUTCQ9NTM9 273 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 A4GNTQ9UNA3 340 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms