RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 CYP2B6P20813 491 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 GLRA1P23415 457 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 MAT2AP31153 395 aaKnown RBP2.36□□□□□ -2.03
XRN1-210ENST00000472697 NDST1P52848 882 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 IRX4P78413 519 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 GHRHRQ02643 423 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 LTBQ06643 244 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 GAGE2BQ13066 116 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 TMED1Q13445 227 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 CUL1Q13616 776 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 TGFBIQ15582 683 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 ZSWIM7Q19AV6 140 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 GAGE2EQ4V326 116 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 SLC18B1Q6NT16 456 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 GAGE2AQ6NT46 116 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 SLC27A4Q6P1M0 643 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 NIPAL3Q6P499 406 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 ADGRG3Q86Y34 549 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 LRRC75A-AS1Q8N1F1 130 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 PYROXD2Q8N2H3 581 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 NOA1Q8NC60 698 aaKnown RBP2.36□□□□□ -2.03
XRN1-210ENST00000472697 OR4A15Q8NGL6 344 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 OR1B1Q8NGR6 318 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 CNIH3Q8TBE1 160 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 RAB3IL1Q8TBN0 382 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 TMEM37Q8WXS4 190 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 NTNG2Q96CW9 530 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 TBCDQ9BTW9 1192 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 APMAPQ9HDC9 416 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 POT1Q9NUX5 634 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 TMEM30AQ9NV96 361 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 VPS54Q9P1Q0 977 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 KLHL8Q9P2G9 620 aaPredicted RBP2.36□□□□□ -2.03
XRN1-210ENST00000472697 SEC14L3Q9UDX4 400 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 GAGE2DQ9UEU5 116 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 ERRFI1Q9UJM3 462 aaPredicted RBP2.36□□□□□ -2.03
XRN1-210ENST00000472697 SRPRBQ9Y5M8 271 aaKnown RBP2.36□□□□□ -2.03
XRN1-210ENST00000472697 TRIP12Q14669 1992 aaPredicted RBP2.36□□□□□ -2.03
XRN1-210ENST00000472697 CD163L1Q9NR16 1453 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 KIF24Q5T7B8 1368 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 SCN11AQ9UI33 1791 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 A0A075B6Q4 140 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 IGHV4-28A0A0C4DH34 117 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 A0A0G2JNG1 304 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 LOC100653049A0A140TA62 436 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 LRRC30A6NM36 301 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 PPIAL4DF5H284 164 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 H0YIV9 168 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 K7ERI5 159 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 KRT34O76011 436 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 CST1P01037 141 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 UMODP07911 640 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 CDH1P12830 882 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 ARSBP15848 533 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 NT5EP21589 574 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 CHMLP26374 656 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 RBMS1P29558 406 aaKnown RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 CHI3L1P36222 383 aaPredicted RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 CETN2P41208 172 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 MAGEA8P43361 318 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 ENTPD1P49961 510 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 NDST2P52849 883 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 VCPP55072 806 aaKnown RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 OR1D5P58170 312 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 LGALS3BPQ08380 585 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 ZNF234Q14588 700 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 PTGR1Q14914 329 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 KIR2DS5Q14953 304 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 XKR6Q5GH73 641 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 TEX35Q5T0J7 233 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 ARMC12Q5T9G4 340 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 C20orf194Q5TEA3 1177 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 AADACL4Q5VUY2 407 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 ZNF425Q6IV72 752 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 MBOAT1Q6ZNC8 495 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 ZNF788Q6ZQV5 615 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 C16orf62Q7Z3J2 963 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 KATNAL2Q8IYT4 538 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 RNF113BQ8IZP6 322 aaKnown RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 FBXL16Q8N461 479 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 CATSPER1Q8NEC5 780 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 OR2L3Q8NG85 312 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 OR7A2PQ8NGA2 310 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 OR14A16Q8NHC5 309 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 LRRC15Q8TF66 581 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 ZNF473Q8WTR7 871 aaKnown RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 TMEM255BQ8WV15 326 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 PHLDA1Q8WV24 401 aaPredicted RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 LHX4Q969G2 390 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 RASD2Q96D21 266 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 SLC38A3Q99624 504 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 C8orf33Q9H7E9 229 aaPredicted RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 BEX1Q9HBH7 125 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 APOBEC3GQ9HC16 384 aaKnown RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 PARD6AQ9NPB6 346 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 MTCH1Q9NZJ7 389 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 ZNF319Q9P2F9 582 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 ZMAT5Q9UDW3 170 aaKnown RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 ING1Q9UK53 422 aaPredicted RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 UMODL1Q5DID0 1318 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms