RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 MIS12Q9H081 205 aa6.33□□□□□ -1.4
SCAF4-205ENST00000472318 THAP2Q9H0W7 228 aa6.33□□□□□ -1.4
SCAF4-205ENST00000472318 LIME1Q9H400 295 aa6.33□□□□□ -1.4
SCAF4-205ENST00000472318 RNPEPL1Q9HAU8 725 aa6.33□□□□□ -1.4
SCAF4-205ENST00000472318 CISHQ9NSE2 258 aa6.33□□□□□ -1.4
SCAF4-205ENST00000472318 EHD3Q9NZN3 535 aa6.33□□□□□ -1.4
SCAF4-205ENST00000472318 NDRG4Q9ULP0 352 aaKnown RBP6.33□□□□□ -1.4
SCAF4-205ENST00000472318 PKD1L1Q8TDX9 2849 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 TRIM49BA6NDI0 452 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 C5orf52A6NGY3 159 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 MAGEB17A8MXT2 336 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 SMAD9O15198 467 aaKnown RBP6.32□□□□□ -1.4
SCAF4-205ENST00000472318 TTI1O43156 1089 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 CLDN11O75508 207 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 CIB2O75838 187 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 NKX2-2O95096 273 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 CLDN14O95500 239 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 NPPAP01160 153 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 CYP2A7P20853 494 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 SERPINB6P35237 376 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 GJC1P36383 396 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 LONP1P36776 959 aaKnown RBP6.32□□□□□ -1.4
SCAF4-205ENST00000472318 CA7P43166 264 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 TSFMP43897 325 aaKnown RBP6.32□□□□□ -1.4
SCAF4-205ENST00000472318 GNPDA1P46926 289 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 MTTPP55157 894 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 OTUD4Q01804 1114 aaKnown RBP6.32□□□□□ -1.4
SCAF4-205ENST00000472318 SLC20A2Q08357 652 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 ACSM1Q08AH1 577 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 ILF3Q12906 894 aaKnown RBP eCLIP6.32□□□□□ -1.4
SCAF4-205ENST00000472318 NFATC2Q13469 925 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 FGFBP1Q14512 234 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 RNASEH2BQ5TBB1 312 aaKnown RBP6.32□□□□□ -1.4
SCAF4-205ENST00000472318 SERTAD4-AS1Q5TG53 156 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 DHRS7BQ6IAN0 325 aaPredicted RBP6.32□□□□□ -1.4
SCAF4-205ENST00000472318 LCN10Q6JVE6 187 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 PWWP2BQ6NUJ5 590 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 CLEC2AQ6UVW9 174 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 CES3Q6UWW8 571 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 C16orf89Q6UX73 402 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 TMEM108Q6UXF1 575 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 WDR88Q6ZMY6 472 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 PSTKQ8IV42 348 aaKnown RBP6.32□□□□□ -1.4
SCAF4-205ENST00000472318 ZADH2Q8N4Q0 377 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 ENDOVQ8N8Q3 282 aaKnown RBP6.32□□□□□ -1.4
SCAF4-205ENST00000472318 ATP6V0D2Q8N8Y2 350 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 SLC35F5Q8WV83 523 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 TRMT61AQ96FX7 289 aaKnown RBP6.32□□□□□ -1.4
SCAF4-205ENST00000472318 C9orf72Q96LT7 481 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 TMEM68Q96MH6 324 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 GAL3ST1Q99999 423 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 ACTRT3Q9BYD9 372 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 TRIM2Q9C040 744 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 AMBRA1Q9C0C7 1298 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 SLC22A11Q9NSA0 550 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 NKX1-2Q9UD57 310 aaPredicted RBP6.32□□□□□ -1.4
SCAF4-205ENST00000472318 WBP11Q9Y2W2 641 aaKnown RBP6.32□□□□□ -1.4
SCAF4-205ENST00000472318 MYO7BQ6PIF6 2116 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 SVEP1Q4LDE5 3571 aa6.32□□□□□ -1.4
SCAF4-205ENST00000472318 FAM237AA0A1B0GTK4 181 aa6.31□□□□□ -1.4
SCAF4-205ENST00000472318 KCNAB3O43448 404 aa6.31□□□□□ -1.4
SCAF4-205ENST00000472318 YEATS4O95619 227 aa6.31□□□□□ -1.4
SCAF4-205ENST00000472318 ALDOAP04075 364 aaKnown RBP6.31□□□□□ -1.4
SCAF4-205ENST00000472318 HOXC4P09017 264 aaPredicted RBP6.31□□□□□ -1.4
SCAF4-205ENST00000472318 NR2F6P10588 404 aa6.31□□□□□ -1.4
SCAF4-205ENST00000472318 GNAZP19086 355 aa6.31□□□□□ -1.4
SCAF4-205ENST00000472318 ITGALP20701 1170 aa6.31□□□□□ -1.4
SCAF4-205ENST00000472318 TRIM23P36406 574 aa6.31□□□□□ -1.4
SCAF4-205ENST00000472318 USP8P40818 1118 aa6.31□□□□□ -1.4
SCAF4-205ENST00000472318 CDH4P55283 916 aa6.31□□□□□ -1.4
SCAF4-205ENST00000472318 ATP5IP56385 69 aaPredicted RBP6.31□□□□□ -1.4
SCAF4-205ENST00000472318 FOLH1Q04609 750 aa6.31□□□□□ -1.4
SCAF4-205ENST00000472318 RNPS1Q15287 305 aaKnown RBP6.31□□□□□ -1.4
SCAF4-205ENST00000472318 MAPK11Q15759 364 aa6.31□□□□□ -1.4
SCAF4-205ENST00000472318 HIST2H2ACQ16777 129 aaPredicted RBP6.31□□□□□ -1.4
SCAF4-205ENST00000472318 TAF3Q5VWG9 929 aa6.31□□□□□ -1.4
SCAF4-205ENST00000472318 ZNF324BQ6AW86 544 aaPredicted RBP6.31□□□□□ -1.4
SCAF4-205ENST00000472318 ARSKQ6UWY0 536 aa6.31□□□□□ -1.4
SCAF4-205ENST00000472318 LRRC70Q7Z2Q7 622 aa6.31□□□□□ -1.4
SCAF4-205ENST00000472318 GPAT4Q86UL3 456 aa6.31□□□□□ -1.4
SCAF4-205ENST00000472318 SLC22A9Q8IVM8 553 aa6.31□□□□□ -1.4
SCAF4-205ENST00000472318 C12orf56Q8IXR9 622 aa6.31□□□□□ -1.4
SCAF4-205ENST00000472318 GHDCQ8N2G8 530 aa6.31□□□□□ -1.4
SCAF4-205ENST00000472318 METTL25Q8N6Q8 603 aa6.31□□□□□ -1.4
SCAF4-205ENST00000472318 SEMA6DQ8NFY4 1073 aa6.31□□□□□ -1.4
SCAF4-205ENST00000472318 ELP5Q8TE02 316 aa6.31□□□□□ -1.4
SCAF4-205ENST00000472318 ROBO4Q8WZ75 1007 aa6.31□□□□□ -1.4
SCAF4-205ENST00000472318 DDB2Q92466 427 aa6.31□□□□□ -1.4
SCAF4-205ENST00000472318 SPSB1Q96BD6 273 aa6.31□□□□□ -1.4
SCAF4-205ENST00000472318 DHX58Q96C10 678 aa6.31□□□□□ -1.4
SCAF4-205ENST00000472318 PHF21BQ96EK2 531 aa6.31□□□□□ -1.4
SCAF4-205ENST00000472318 C11orf24Q96F05 449 aaPredicted RBP6.31□□□□□ -1.4
SCAF4-205ENST00000472318 ZNF778Q96MU6 729 aa6.31□□□□□ -1.4
SCAF4-205ENST00000472318 WDR77Q9BQA1 342 aaPredicted RBP6.31□□□□□ -1.4
SCAF4-205ENST00000472318 TBC1D10AQ9BXI6 508 aa6.31□□□□□ -1.4
SCAF4-205ENST00000472318 FARSBQ9NSD9 589 aaKnown RBP6.31□□□□□ -1.4
SCAF4-205ENST00000472318 SERTAD4Q9NUC0 356 aa6.31□□□□□ -1.4
SCAF4-205ENST00000472318 TRNAU1APQ9NX07 287 aaKnown RBP6.31□□□□□ -1.4
SCAF4-205ENST00000472318 CLEC4AQ9UMR7 237 aa6.31□□□□□ -1.4
SCAF4-205ENST00000472318 SNX10Q9Y5X0 201 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms