RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 OR7G3Q8NG95 312 aa2.22□□□□□ -2.05
RBM39-228ENST00000471635 DEPDC1BQ8WUY9 529 aa2.22□□□□□ -2.05
RBM39-228ENST00000471635 MLPHQ9BV36 600 aaPredicted RBP2.22□□□□□ -2.05
RBM39-228ENST00000471635 EDEM3Q9BZQ6 932 aa2.22□□□□□ -2.05
RBM39-228ENST00000471635 NAPBQ9H115 298 aa2.22□□□□□ -2.05
RBM39-228ENST00000471635 TMEM206Q9H813 350 aa2.22□□□□□ -2.05
RBM39-228ENST00000471635 DDX28Q9NUL7 540 aaKnown RBP2.22□□□□□ -2.05
RBM39-228ENST00000471635 RPH3AQ9Y2J0 694 aaPredicted RBP2.22□□□□□ -2.05
RBM39-228ENST00000471635 HIVEP2P31629 2446 aa2.22□□□□□ -2.05
RBM39-228ENST00000471635 NPIPA5A0A0B4J1W7 369 aa2.21□□□□□ -2.06
RBM39-228ENST00000471635 A0A1W2PQ67 120 aa2.21□□□□□ -2.06
RBM39-228ENST00000471635 ERVV-1B6SEH8 477 aa2.21□□□□□ -2.06
RBM39-228ENST00000471635 NPIPA5E9PKD4 350 aa2.21□□□□□ -2.06
RBM39-228ENST00000471635 C11orf98E9PRG8 122 aa2.21□□□□□ -2.06
RBM39-228ENST00000471635 GMNNO75496 209 aa2.21□□□□□ -2.06
RBM39-228ENST00000471635 HPNP05981 417 aa2.21□□□□□ -2.06
RBM39-228ENST00000471635 H2AFZP0C0S5 128 aa2.21□□□□□ -2.06
RBM39-228ENST00000471635 TOP1P11387 765 aaKnown RBP2.21□□□□□ -2.06
RBM39-228ENST00000471635 CYP11B1P15538 503 aa2.21□□□□□ -2.06
RBM39-228ENST00000471635 PTBP1P26599 531 aaKnown RBP eCLIP2.21□□□□□ -2.06
RBM39-228ENST00000471635 METAP1P53582 386 aa2.21□□□□□ -2.06
RBM39-228ENST00000471635 BCL2L1Q07817 233 aa2.21□□□□□ -2.06
RBM39-228ENST00000471635 SHHQ15465 462 aa2.21□□□□□ -2.06
RBM39-228ENST00000471635 CCDC158Q5M9N0 1113 aa2.21□□□□□ -2.06
RBM39-228ENST00000471635 ZNF691Q5VV52 312 aa2.21□□□□□ -2.06
RBM39-228ENST00000471635 TRPM8Q7Z2W7 1104 aa2.21□□□□□ -2.06
RBM39-228ENST00000471635 HOOK3Q86VS8 718 aa2.21□□□□□ -2.06
RBM39-228ENST00000471635 H1FOOQ8IZA3 346 aaPredicted RBP2.21□□□□□ -2.06
RBM39-228ENST00000471635 BBS1Q8NFJ9 593 aa2.21□□□□□ -2.06
RBM39-228ENST00000471635 CITED2Q99967 270 aaPredicted RBP2.21□□□□□ -2.06
RBM39-228ENST00000471635 CCSER1Q9C0I3 900 aa2.21□□□□□ -2.06
RBM39-228ENST00000471635 GANQ9H2C0 597 aa2.21□□□□□ -2.06
RBM39-228ENST00000471635 PTGES2Q9H7Z7 377 aa2.21□□□□□ -2.06
RBM39-228ENST00000471635 DNAJB9Q9UBS3 223 aa2.21□□□□□ -2.06
RBM39-228ENST00000471635 SYNJ2O15056 1496 aa2.2□□□□□ -2.06
RBM39-228ENST00000471635 SPRR5A0A1B0GTR4 108 aa2.2□□□□□ -2.06
RBM39-228ENST00000471635 C13orf42A0A1B0GVH6 325 aa2.2□□□□□ -2.06
RBM39-228ENST00000471635 HTATSF1O43719 755 aaKnown RBP2.2□□□□□ -2.06
RBM39-228ENST00000471635 MMP23AO75900 390 aa2.2□□□□□ -2.06
RBM39-228ENST00000471635 RPS2P15880 293 aaKnown RBP2.2□□□□□ -2.06
RBM39-228ENST00000471635 SERPINB6P35237 376 aa2.2□□□□□ -2.06
RBM39-228ENST00000471635 TLE4Q04727 773 aa2.2□□□□□ -2.06
RBM39-228ENST00000471635 PUDPQ08623 228 aa2.2□□□□□ -2.06
RBM39-228ENST00000471635 SHROOM1Q2M3G4 852 aaPredicted RBP2.2□□□□□ -2.06
RBM39-228ENST00000471635 EPC2Q52LR7 807 aa2.2□□□□□ -2.06
RBM39-228ENST00000471635 ATRAIDQ6UW56 229 aa2.2□□□□□ -2.06
RBM39-228ENST00000471635 C9orf40Q8IXQ3 194 aa2.2□□□□□ -2.06
RBM39-228ENST00000471635 ZNF540Q8NDQ6 660 aa2.2□□□□□ -2.06
RBM39-228ENST00000471635 OR52J3Q8NH60 311 aa2.2□□□□□ -2.06
RBM39-228ENST00000471635 LHX4Q969G2 390 aa2.2□□□□□ -2.06
RBM39-228ENST00000471635 TEKT1Q969V4 418 aa2.2□□□□□ -2.06
RBM39-228ENST00000471635 EPSTI1Q96J88 318 aa2.2□□□□□ -2.06
RBM39-228ENST00000471635 RPGRIP1Q96KN7 1286 aa2.2□□□□□ -2.06
RBM39-228ENST00000471635 UTP14AQ9BVJ6 771 aaKnown RBP2.2□□□□□ -2.06
RBM39-228ENST00000471635 TM2D1Q9BX74 207 aa2.2□□□□□ -2.06
RBM39-228ENST00000471635 ALG9Q9H6U8 611 aa2.2□□□□□ -2.06
RBM39-228ENST00000471635 IGKV2D-24A0A075B6R9 120 aa2.19□□□□□ -2.06
RBM39-228ENST00000471635 TBCAO75347 108 aaKnown RBP2.19□□□□□ -2.06
RBM39-228ENST00000471635 WISP3O95389 354 aaPredicted RBP2.19□□□□□ -2.06
RBM39-228ENST00000471635 HSPA4LO95757 839 aa2.19□□□□□ -2.06
RBM39-228ENST00000471635 HOXB7P09629 217 aa2.19□□□□□ -2.06
RBM39-228ENST00000471635 CYP3A5P20815 502 aa2.19□□□□□ -2.06
RBM39-228ENST00000471635 GABRR1P24046 479 aa2.19□□□□□ -2.06
RBM39-228ENST00000471635 ACADSBP45954 432 aa2.19□□□□□ -2.06
RBM39-228ENST00000471635 POU3F4P49335 361 aa2.19□□□□□ -2.06
RBM39-228ENST00000471635 ST8SIA6P61647 398 aa2.19□□□□□ -2.06
RBM39-228ENST00000471635 HERV-K104P63124 156 aa2.19□□□□□ -2.06
RBM39-228ENST00000471635 IL18R1Q13478 541 aa2.19□□□□□ -2.06
RBM39-228ENST00000471635 LGSNQ5TDP6 509 aa2.19□□□□□ -2.06
RBM39-228ENST00000471635 MEDAGQ5VYS4 303 aa2.19□□□□□ -2.06
RBM39-228ENST00000471635 UFSP1Q6NVU6 142 aa2.19□□□□□ -2.06
RBM39-228ENST00000471635 HSD17B13Q7Z5P4 300 aaPredicted RBP2.19□□□□□ -2.06
RBM39-228ENST00000471635 TSEN54Q7Z6J9 526 aaKnown RBP2.19□□□□□ -2.06
RBM39-228ENST00000471635 PYROXD2Q8N2H3 581 aa2.19□□□□□ -2.06
RBM39-228ENST00000471635 DCAF4L2Q8NA75 395 aa2.19□□□□□ -2.06
RBM39-228ENST00000471635 FBXO30Q8TB52 745 aa2.19□□□□□ -2.06
RBM39-228ENST00000471635 ADAMTS16Q8TE57 1224 aa2.19□□□□□ -2.06
RBM39-228ENST00000471635 DDX50Q9BQ39 737 aaKnown RBP2.19□□□□□ -2.06
RBM39-228ENST00000471635 CNPY3Q9BT09 278 aa2.19□□□□□ -2.06
RBM39-228ENST00000471635 OR51J1Q9H342 316 aa2.19□□□□□ -2.06
RBM39-228ENST00000471635 EXOSC3Q9NQT5 275 aaKnown RBP2.19□□□□□ -2.06
RBM39-228ENST00000471635 DNAJC17Q9NVM6 304 aaKnown RBP2.19□□□□□ -2.06
RBM39-228ENST00000471635 ZNF175Q9Y473 711 aa2.19□□□□□ -2.06
RBM39-228ENST00000471635 KIF26AQ9ULI4 1882 aaPredicted RBP2.18□□□□□ -2.06
RBM39-228ENST00000471635 ZNF254O75437 659 aa2.18□□□□□ -2.06
RBM39-228ENST00000471635 ZNF44P15621 663 aa2.18□□□□□ -2.06
RBM39-228ENST00000471635 TSPY1Q01534 308 aa2.18□□□□□ -2.06
RBM39-228ENST00000471635 SMC1AQ14683 1233 aaKnown RBP2.18□□□□□ -2.06
RBM39-228ENST00000471635 EXOSC7Q15024 291 aaKnown RBP2.18□□□□□ -2.06
RBM39-228ENST00000471635 PRR5LQ6MZQ0 368 aa2.18□□□□□ -2.06
RBM39-228ENST00000471635 STHQ8IWL8 128 aa2.18□□□□□ -2.06
RBM39-228ENST00000471635 ZNF786Q8N393 782 aa2.18□□□□□ -2.06
RBM39-228ENST00000471635 ZNF397Q8NF99 534 aaPredicted RBP2.18□□□□□ -2.06
RBM39-228ENST00000471635 OR4F17Q8NGA8 305 aa2.18□□□□□ -2.06
RBM39-228ENST00000471635 DNAJA3Q96EY1 480 aa2.18□□□□□ -2.06
RBM39-228ENST00000471635 OR4F4Q96R69 305 aa2.18□□□□□ -2.06
RBM39-228ENST00000471635 IL4I1Q96RQ9 567 aa2.18□□□□□ -2.06
RBM39-228ENST00000471635 NICN1Q9BSH3 213 aa2.18□□□□□ -2.06
RBM39-228ENST00000471635 APOOQ9BUR5 198 aa2.18□□□□□ -2.06
RBM39-228ENST00000471635 DCLRE1BQ9H816 532 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms