RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 C12orf29Q8N999 325 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 AQP11Q8NBQ7 271 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 OR7A2PQ8NGA2 310 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 CTNNBL1Q8WYA6 563 aaPredicted RBP4.47□□□□□ -1.69
CCDC39-202ENST00000471307 SECISBP2LQ93073 1101 aaKnown RBP4.47□□□□□ -1.69
CCDC39-202ENST00000471307 TBC1D31Q96DN5 1066 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 FAM71F1Q96KD3 344 aaPredicted RBP4.47□□□□□ -1.69
CCDC39-202ENST00000471307 DGAT2Q96PD7 388 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 GCNAQ96QF7 691 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 PCDHB18PQ96TA0 734 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 RPP25Q9BUL9 199 aaKnown RBP4.47□□□□□ -1.69
CCDC39-202ENST00000471307 THUMPD3Q9BV44 507 aaKnown RBP4.47□□□□□ -1.69
CCDC39-202ENST00000471307 TDRD1Q9BXT4 1180 aaKnown RBP4.47□□□□□ -1.69
CCDC39-202ENST00000471307 DUSP16Q9BY84 665 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 TSGA10Q9BZW7 698 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 COPS7BQ9H9Q2 264 aaPredicted RBP4.47□□□□□ -1.69
CCDC39-202ENST00000471307 ACP6Q9NPH0 428 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 MARCH5Q9NX47 278 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 HAO2Q9NYQ3 351 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 HMGXB4Q9UGU5 601 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 WDR83OSQ9Y284 106 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 R4GN57 208 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 MYH10P35580 1976 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 PTPRSQ13332 1948 aa4.46□□□□□ -1.69
CCDC39-202ENST00000471307 PDE4DIPQ5VU43 2346 aa4.46□□□□□ -1.69
CCDC39-202ENST00000471307 COL4A6Q14031 1691 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 TRBV5-5A0A0J9YX44 114 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 TCRBV21S2A2A0A5A6 115 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 MYBPHLA2RUH7 354 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 TMCO5BA8MYB1 307 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 SNURFLB1AK76 121 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 C5orf67F2Z3F1 127 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 PI4K2BG5E9Z4 385 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 KIF2AO00139 706 aaPredicted RBP4.46□□□□□ -1.7
CCDC39-202ENST00000471307 XPO1O14980 1071 aaKnown RBP4.46□□□□□ -1.7
CCDC39-202ENST00000471307 CALCAP01258 141 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 CALB1P05937 261 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 FAM200BP0CF97 657 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 ACAT1P24752 427 aaKnown RBP4.46□□□□□ -1.7
CCDC39-202ENST00000471307 GP5P40197 560 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 ACADSBP45954 432 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 RPL34P49207 117 aaKnown RBP4.46□□□□□ -1.7
CCDC39-202ENST00000471307 DNA2P51530 1060 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 HADHBP55084 474 aaKnown RBP4.46□□□□□ -1.7
CCDC39-202ENST00000471307 BST2Q10589 180 aaKnown RBP4.46□□□□□ -1.7
CCDC39-202ENST00000471307 COX10Q12887 443 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 TRAP1Q12931 704 aaKnown RBP4.46□□□□□ -1.7
CCDC39-202ENST00000471307 CDH18Q13634 790 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 SHHQ15465 462 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 PTPN14Q15678 1187 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 EXT1Q16394 746 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 CFAP221Q4G0U5 840 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 TPGS2Q68CL5 300 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 OR4A47Q6IF82 309 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 SLC8B1Q6J4K2 584 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 SHQ1Q6PI26 577 aaKnown RBP4.46□□□□□ -1.7
CCDC39-202ENST00000471307 PAQR9Q6ZVX9 377 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 ZER1Q7Z7L7 766 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 TMEM110Q86TL2 294 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 MCOLN2Q8IZK6 566 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 MAML2Q8IZL2 1156 aaPredicted RBP4.46□□□□□ -1.7
CCDC39-202ENST00000471307 C10orf53Q8N6V4 93 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 OR8H1Q8NGG4 311 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 OR10Q1Q8NGQ4 319 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 C9orf43Q8TAL5 461 aaPredicted RBP4.46□□□□□ -1.7
CCDC39-202ENST00000471307 SPPL2BQ8TCT7 592 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 SLC2A14Q8TDB8 520 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 C2orf15Q8WU43 125 aaKnown RBP4.46□□□□□ -1.7
CCDC39-202ENST00000471307 HSFY1Q96LI6 401 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 TGS1Q96RS0 853 aaKnown RBP4.46□□□□□ -1.7
CCDC39-202ENST00000471307 PKMYT1Q99640 499 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 MAP3K3Q99759 626 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 DESI2Q9BSY9 194 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 MED10Q9BTT4 135 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 DPEP3Q9H4B8 488 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 CSNK1G1Q9HCP0 422 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 MRPL47Q9HD33 250 aaKnown RBP4.46□□□□□ -1.7
CCDC39-202ENST00000471307 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.46□□□□□ -1.7
CCDC39-202ENST00000471307 MRPL17Q9NRX2 175 aaKnown RBP4.46□□□□□ -1.7
CCDC39-202ENST00000471307 FAM49BQ9NUQ9 324 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 OLAHQ9NV23 265 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 ADAM22Q9P0K1 906 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 WDR35Q9P2L0 1181 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 LCMT1Q9UIC8 334 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 MOSPD1Q9UJG1 213 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 TSPAN16Q9UKR8 245 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 RARRES3Q9UL19 164 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 CHKBQ9Y259 395 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 SELENOKQ9Y6D0 94 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 VWA8A3KMH1 1905 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 MYO9BQ13459 2157 aa4.46□□□□□ -1.7
CCDC39-202ENST00000471307 LAMA2P24043 3122 aaKnown RBP4.45□□□□□ -1.7
CCDC39-202ENST00000471307 M0QYV0 167 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 BCL2L11O43521 198 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 HCRTO43612 131 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 KIF5CO60282 957 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 CXCL14O95715 111 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 FYNP06241 537 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 CCDC130P13994 396 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 ADORA2BP29275 332 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms