RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 SIAH2O43255 324 aa11.13□□□□□ -0.63
HDAC3-204ENST00000469207 ERN1O75460 977 aaKnown RBP11.13□□□□□ -0.63
HDAC3-204ENST00000469207 REM1O75628 298 aa11.13□□□□□ -0.63
HDAC3-204ENST00000469207 CBR3O75828 277 aa11.13□□□□□ -0.63
HDAC3-204ENST00000469207 IL18BPO95998 194 aa11.13□□□□□ -0.63
HDAC3-204ENST00000469207 NAGAP17050 411 aa11.13□□□□□ -0.63
HDAC3-204ENST00000469207 ADSLP30566 484 aaPredicted RBP11.13□□□□□ -0.63
HDAC3-204ENST00000469207 CPA2P48052 419 aa11.13□□□□□ -0.63
HDAC3-204ENST00000469207 ALDH9A1P49189 494 aa11.13□□□□□ -0.63
HDAC3-204ENST00000469207 LHX2P50458 406 aa11.13□□□□□ -0.63
HDAC3-204ENST00000469207 GFRA1P56159 465 aa11.13□□□□□ -0.63
HDAC3-204ENST00000469207 RPP38P78345 283 aaKnown RBP11.13□□□□□ -0.63
HDAC3-204ENST00000469207 SORDQ00796 357 aa11.13□□□□□ -0.63
HDAC3-204ENST00000469207 PLCXD2Q0VAA5 305 aa11.13□□□□□ -0.63
HDAC3-204ENST00000469207 IFT88Q13099 833 aa11.13□□□□□ -0.63
HDAC3-204ENST00000469207 C6orf163Q5TEZ5 329 aa11.13□□□□□ -0.63
HDAC3-204ENST00000469207 LETMD1Q6P1Q0 360 aa11.13□□□□□ -0.63
HDAC3-204ENST00000469207 KLC3Q6P597 504 aa11.13□□□□□ -0.63
HDAC3-204ENST00000469207 CXorf67Q86X51 503 aaPredicted RBP11.13□□□□□ -0.63
HDAC3-204ENST00000469207 CCDC116Q8IYX3 515 aa11.13□□□□□ -0.63
HDAC3-204ENST00000469207 C17orf53Q8N3J3 647 aaPredicted RBP11.13□□□□□ -0.63
HDAC3-204ENST00000469207 OR4N2Q8NGD1 307 aa11.13□□□□□ -0.63
HDAC3-204ENST00000469207 KAT2AQ92830 837 aa11.13□□□□□ -0.63
HDAC3-204ENST00000469207 CTHRC1Q96CG8 243 aa11.13□□□□□ -0.63
HDAC3-204ENST00000469207 C18orf12Q96KH6 178 aa11.13□□□□□ -0.63
HDAC3-204ENST00000469207 ZNF681Q96N22 645 aa11.13□□□□□ -0.63
HDAC3-204ENST00000469207 NEUROD4Q9HD90 331 aa11.13□□□□□ -0.63
HDAC3-204ENST00000469207 AHSPQ9NZD4 102 aa11.13□□□□□ -0.63
HDAC3-204ENST00000469207 ZNF225Q9UK10 706 aa11.13□□□□□ -0.63
HDAC3-204ENST00000469207 MED12LQ86YW9 2145 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 C1orf226A1L170 272 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 SH3D21A4FU49 640 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 PRAMEF25A6NGN4 478 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 A8MXE2 369 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 H0YC42 278 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 PLOD2O00469 737 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 ZIC3O60481 467 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 ATP1B1P05026 303 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 INHBBP09529 407 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 SBK3P0C264 359 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 CHN1P15882 459 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 CSNK2A2P19784 350 aaPredicted RBP11.12□□□□□ -0.63
HDAC3-204ENST00000469207 DRD5P21918 477 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 PPICP45877 212 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 TPD52P55327 224 aaPredicted RBP11.12□□□□□ -0.63
HDAC3-204ENST00000469207 CLDN18P56856 261 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 CORO7P57737 925 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 HMGCS1Q01581 520 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 CAV1Q03135 178 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 NAB1Q13506 487 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 C22orf34Q6ZV56 151 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 PAGE2Q7Z2X7 111 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 BIVMQ86UB2 503 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 C1orf52Q8N6N3 182 aaKnown RBP11.12□□□□□ -0.63
HDAC3-204ENST00000469207 TRPC4APQ8TEL6 797 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 SELENOMQ8WWX9 145 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 KLHL29Q96CT2 875 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 DACH2Q96NX9 599 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 WFIKKN1Q96NZ8 548 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 ADOQ96SZ5 270 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 OR2B2Q9GZK3 357 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 ELOVL6Q9H5J4 265 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 TAS2R10Q9NYW0 307 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 NINJ2Q9NZG7 142 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 CLCF1Q9UBD9 225 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 XPR1Q9UBH6 696 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 ADAM29Q9UKF5 820 aa11.12□□□□□ -0.63
HDAC3-204ENST00000469207 GPR55Q9Y2T6 319 aaPredicted RBP11.12□□□□□ -0.63
HDAC3-204ENST00000469207 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 GOLGA6L10A6NI86 522 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 CASKO14936 926 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 TNFSF13O75888 250 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 OR4F21O95013 312 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 LY6G6DO95868 133 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 CT45A8P0DMV1 189 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 CT45A9P0DMV2 189 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 CPOXP36551 454 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 SERPINB8P50452 374 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 CLDN15P56746 228 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 PRSS53Q2L4Q9 553 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 CT45A2Q5DJT8 189 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 TMEM81Q6P7N7 255 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 VWA1Q6PCB0 445 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 CLEC9AQ6UXN8 241 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 NPSR1Q6W5P4 371 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 IFNEQ86WN2 208 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 PLCZ1Q86YW0 608 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 TMEM151AQ8N4L1 468 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 OR5M1Q8NGP8 315 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 WNT2BQ93097 391 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 STARD4Q96DR4 205 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 UCN2Q96RP3 112 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 TM9SF2Q99805 663 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 PIGQQ9BRB3 760 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 LRRC1Q9BTT6 524 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 SFXN3Q9BWM7 321 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 RAB17Q9H0T7 212 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 ZNF395Q9H8N7 513 aaPredicted RBP11.11□□□□□ -0.63
HDAC3-204ENST00000469207 ZDHHC18Q9NUE0 388 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 RYDENQ9NUL5 291 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms