RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 YIPF6Q96EC8 236 aa11.68□□□□□ -0.54
USP11-206ENST00000469080 DTD2Q96FN9 168 aa11.68□□□□□ -0.54
USP11-206ENST00000469080 MRGPRX3Q96LB0 322 aa11.68□□□□□ -0.54
USP11-206ENST00000469080 SLC22A4Q9H015 551 aa11.68□□□□□ -0.54
USP11-206ENST00000469080 MCUBQ9NWR8 336 aa11.68□□□□□ -0.54
USP11-206ENST00000469080 PRRC2CQ9Y520 2896 aaKnown RBP11.67□□□□□ -0.54
USP11-206ENST00000469080 CELSR3Q9NYQ7 3312 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 A0A1W2PQ09 198 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 LGALS8O00214 317 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 YY2O15391 372 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 ERI3O43414 337 aaKnown RBP11.67□□□□□ -0.54
USP11-206ENST00000469080 LATS1O95835 1130 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 FHP07954 510 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 ATP4BP51164 291 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 HBA1P69905 142 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 RUNDC3AQ59EK9 446 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 PLEKHS1Q5SXH7 462 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 C9orf64Q5T6V5 341 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 HENMT1Q5T8I9 393 aaKnown RBP11.67□□□□□ -0.54
USP11-206ENST00000469080 FAM92BQ6ZTR7 304 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 OR5D16Q8NGK9 328 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 DUS3LQ96G46 650 aaKnown RBP11.67□□□□□ -0.54
USP11-206ENST00000469080 GAL3ST1Q99999 423 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 CHCHD6Q9BRQ6 235 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 SCN3BQ9NY72 215 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 SLC28A2O43868 658 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 APOC3P02656 99 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 PRPS2P11908 318 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 HOXB2P14652 356 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 PRPS1L1P21108 318 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 SSTR2P30874 369 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 CLDN8P56748 225 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 CBLBQ13191 982 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 WSCD2Q2TBF2 565 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 BHLHB9Q6PI77 547 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 CCDC116Q8IYX3 515 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 TCTE3Q8IZS6 198 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 CLRN3Q8NCR9 226 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 CEP76Q8TAP6 659 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 ASB16Q96NS5 453 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 CPEB1Q9BZB8 566 aaKnown RBP11.67□□□□□ -0.54
USP11-206ENST00000469080 DPEP2Q9H4A9 486 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 RNF121Q9H920 327 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 FAM118AQ9NWS6 357 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 IL20RAQ9UHF4 553 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 SLC13A4Q9UKG4 626 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 CLCA3PQ9Y6N3 262 aa11.67□□□□□ -0.54
USP11-206ENST00000469080 BCKDKO14874 412 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 RFPL3O75679 317 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 CDC123O75794 336 aaPredicted RBP11.66□□□□□ -0.54
USP11-206ENST00000469080 C1orf105O95561 183 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 KLF8O95600 359 aaPredicted RBP11.66□□□□□ -0.54
USP11-206ENST00000469080 PCP4P48539 62 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 HNMTP50135 292 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 PNLIPRP1P54315 467 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 EEF1A1P68104 462 aaKnown RBP11.66□□□□□ -0.54
USP11-206ENST00000469080 VLDLRP98155 873 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 HOXC5Q00444 222 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 EEF1A2Q05639 463 aaKnown RBP11.66□□□□□ -0.54
USP11-206ENST00000469080 CST6Q15828 149 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 ZMAT1Q5H9K5 638 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 EEF1A1P5Q5VTE0 462 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 LRRTM4Q86VH4 590 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 ADGRG3Q86Y34 549 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 RASGRP3Q8IV61 690 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 SFTPA2Q8IWL1 248 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 MSRB3Q8IXL7 192 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 METTL27Q8N6F8 245 aaPredicted RBP11.66□□□□□ -0.54
USP11-206ENST00000469080 CA5BP1Q8WTZ4 195 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 CMTM7Q96FZ5 175 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 ARL5BQ96KC2 179 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 TPSD1Q9BZJ3 242 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 BRINP2Q9C0B6 783 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 QRSL1Q9H0R6 528 aaKnown RBP11.66□□□□□ -0.54
USP11-206ENST00000469080 PRSS16Q9NQE7 514 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 STARD5Q9NSY2 213 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 MSRAQ9UJ68 235 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 NDUFS4O43181 175 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 GGT1P19440 569 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 GADD45AP24522 165 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 ALDH3A2P51648 485 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 TAP2Q03519 686 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 BAMBIQ13145 260 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 LRRC32Q14392 662 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 TATDN3Q17R31 274 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 DUOXA1Q1HG43 343 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 ZC3H12BQ5HYM0 836 aaKnown RBP11.66□□□□□ -0.54
USP11-206ENST00000469080 CEP68Q76N32 757 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 PRSS58Q8IYP2 241 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 CBARPQ8N350 705 aaPredicted RBP11.66□□□□□ -0.54
USP11-206ENST00000469080 LMLNQ96KR4 655 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 NTMT1Q9BV86 223 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 MCOLN1Q9GZU1 580 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 ESRP2Q9H6T0 727 aaKnown RBP11.66□□□□□ -0.54
USP11-206ENST00000469080 IL1RAPQ9NPH3 570 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 C11orf16Q9NQ32 467 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 GSN-AS1Q9NRJ2 163 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 ATXN7L1Q9ULK2 861 aaPredicted RBP11.66□□□□□ -0.54
USP11-206ENST00000469080 MGAT4AQ9UM21 535 aa11.66□□□□□ -0.54
USP11-206ENST00000469080 PCDHGB2Q9Y5G2 931 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms