RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 DCTN2Q13561 401 aaKnown RBP13.62□□□□□ -0.23
COL5A1-205ENST00000464187 TP53BP2Q13625 1128 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 PUM1Q14671 1186 aaKnown RBP eCLIP13.62□□□□□ -0.23
COL5A1-205ENST00000464187 GANABQ14697 944 aaKnown RBP13.62□□□□□ -0.23
COL5A1-205ENST00000464187 PROX2Q3B8N5 592 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 SLC44A2Q8IWA5 706 aaPredicted RBP13.62□□□□□ -0.23
COL5A1-205ENST00000464187 GPR32P1Q8NGA4 272 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 AMDHD1Q96NU7 426 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 PSD2Q9BQI7 771 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 EHD3Q9NZN3 535 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 WARS2Q9UGM6 360 aaKnown RBP13.62□□□□□ -0.23
COL5A1-205ENST00000464187 ENPP5Q9UJA9 477 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 ATXN7L1Q9ULK2 861 aaPredicted RBP13.62□□□□□ -0.23
COL5A1-205ENST00000464187 PLCL2Q9UPR0 1127 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 SCN3AQ9NY46 2000 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 ZNF318Q5VUA4 2279 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 A0A1W2PR48 441 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 WASHC1A8K0Z3 465 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 A8MU76 341 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 A8MVJ9 347 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 PCDH17O14917 1159 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 MAN1A2O60476 641 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 GUCY1B2O75343 617 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 MFN2O95140 757 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 IFNW1P05000 195 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 RPLP0P05388 317 aaKnown RBP13.62□□□□□ -0.23
COL5A1-205ENST00000464187 ZNF883P0CG24 379 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 RHCEP18577 417 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 ZNF10P21506 573 aaPredicted RBP13.62□□□□□ -0.23
COL5A1-205ENST00000464187 CCL7P80098 99 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 HSD11B2P80365 405 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 SQSTM1Q13501 440 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 KCNAB1Q14722 419 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 TMEM71Q6P5X7 295 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 PRR23CQ6ZRP0 262 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 PRSS41Q7RTY9 318 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 TMPRSS9Q7Z410 1059 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 ZNF540Q8NDQ6 660 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 TANKQ92844 425 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 SLC35G5Q96KT7 338 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 SERINC2Q96SA4 455 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 MAPKAP1Q9BPZ7 522 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 FAIM2Q9BWQ8 316 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 COL25A1Q9BXS0 654 aaPredicted RBP13.62□□□□□ -0.23
COL5A1-205ENST00000464187 SLC35C2Q9NQQ7 365 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 SEMA5BQ9P283 1151 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 SLC22A7Q9Y694 548 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 RP1P56715 2156 aa13.61□□□□□ -0.23
COL5A1-205ENST00000464187 PRAMEF27A3QJZ7 478 aa13.61□□□□□ -0.23
COL5A1-205ENST00000464187 GLOD5A6NK44 160 aa13.61□□□□□ -0.23
COL5A1-205ENST00000464187 PROM1O43490 865 aa13.61□□□□□ -0.23
COL5A1-205ENST00000464187 RGS10O43665 173 aa13.61□□□□□ -0.23
COL5A1-205ENST00000464187 B3GALT2O43825 422 aa13.61□□□□□ -0.23
COL5A1-205ENST00000464187 GADD45GO95257 159 aa13.61□□□□□ -0.23
COL5A1-205ENST00000464187 ZNF182P17025 639 aaPredicted RBP13.61□□□□□ -0.23
COL5A1-205ENST00000464187 ARL4DP49703 201 aa13.61□□□□□ -0.23
COL5A1-205ENST00000464187 HMGA2P52926 109 aa13.61□□□□□ -0.23
COL5A1-205ENST00000464187 LIM2P55344 173 aa13.61□□□□□ -0.23
COL5A1-205ENST00000464187 KCNC4Q03721 635 aa13.61□□□□□ -0.23
COL5A1-205ENST00000464187 AQP6Q13520 282 aa13.61□□□□□ -0.23
COL5A1-205ENST00000464187 PRTGQ2VWP7 1150 aa13.61□□□□□ -0.23
COL5A1-205ENST00000464187 C11orf91Q3C1V1 193 aa13.61□□□□□ -0.23
COL5A1-205ENST00000464187 AP1ARQ63HQ0 302 aa13.61□□□□□ -0.23
COL5A1-205ENST00000464187 C18orf63Q68DL7 685 aa13.61□□□□□ -0.23
COL5A1-205ENST00000464187 DBX2Q6ZNG2 339 aa13.61□□□□□ -0.23
COL5A1-205ENST00000464187 PRSS42Q7Z5A4 293 aa13.61□□□□□ -0.23
COL5A1-205ENST00000464187 ARHGEF39Q8N4T4 335 aa13.61□□□□□ -0.23
COL5A1-205ENST00000464187 FAM81AQ8TBF8 368 aa13.61□□□□□ -0.23
COL5A1-205ENST00000464187 TBC1D15Q8TC07 691 aa13.61□□□□□ -0.23
COL5A1-205ENST00000464187 IFI44Q8TCB0 444 aa13.61□□□□□ -0.23
COL5A1-205ENST00000464187 ZNF285Q96NJ3 590 aa13.61□□□□□ -0.23
COL5A1-205ENST00000464187 SIGLEC11Q96RL6 698 aa13.61□□□□□ -0.23
COL5A1-205ENST00000464187 CCNB1IP1Q9NPC3 277 aa13.61□□□□□ -0.23
COL5A1-205ENST00000464187 DNAAF2Q9NVR5 837 aaKnown RBP13.61□□□□□ -0.23
COL5A1-205ENST00000464187 IRAK4Q9NWZ3 460 aa13.61□□□□□ -0.23
COL5A1-205ENST00000464187 LYARQ9NX58 379 aaKnown RBP13.61□□□□□ -0.23
COL5A1-205ENST00000464187 KCND3Q9UK17 655 aa13.61□□□□□ -0.23
COL5A1-205ENST00000464187 PSME2Q9UL46 239 aa13.61□□□□□ -0.23
COL5A1-205ENST00000464187 FAM32AQ9Y421 112 aaKnown RBP13.61□□□□□ -0.23
COL5A1-205ENST00000464187 UNC13CQ8NB66 2214 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 ZNF860A6NHJ4 632 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 FFAR1O14842 300 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 FOXD2O60548 495 aaPredicted RBP13.6□□□□□ -0.23
COL5A1-205ENST00000464187 PDE9AO76083 593 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 CCNB2O95067 398 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 AIFM1O95831 613 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 OR12D1P0DN82 309 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 CBLP22681 906 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 ACVR2AP27037 513 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 NTSP30990 170 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 GRK6P43250 576 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 ENTPD1P49961 510 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 DUSP3P51452 185 aaPredicted RBP13.6□□□□□ -0.23
COL5A1-205ENST00000464187 NCBP2P52298 156 aaKnown RBP eCLIP13.6□□□□□ -0.23
COL5A1-205ENST00000464187 ZNF574Q6ZN55 896 aaPredicted RBP13.6□□□□□ -0.23
COL5A1-205ENST00000464187 SZRD1Q7Z422 152 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 ANKRD13BQ86YJ7 626 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 D2HGDHQ8N465 521 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 RORBQ92753 470 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 OR51I1Q9H343 314 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms