RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 SERPINA3P01011 423 aa4.94□□□□□ -1.62
COPS3-205ENST00000463097 ERVK-10P10266 1014 aa4.94□□□□□ -1.62
COPS3-205ENST00000463097 PLA2G2AP14555 144 aa4.94□□□□□ -1.62
COPS3-205ENST00000463097 EDNRAP25101 427 aa4.94□□□□□ -1.62
COPS3-205ENST00000463097 GRIA1P42261 906 aa4.94□□□□□ -1.62
COPS3-205ENST00000463097 PGFP49763 221 aa4.94□□□□□ -1.62
COPS3-205ENST00000463097 OSTNP61366 133 aa4.94□□□□□ -1.62
COPS3-205ENST00000463097 HNRNPDQ14103 355 aaKnown RBP4.94□□□□□ -1.62
COPS3-205ENST00000463097 GCKRQ14397 625 aa4.94□□□□□ -1.62
COPS3-205ENST00000463097 BEND6Q5SZJ8 279 aaPredicted RBP4.94□□□□□ -1.62
COPS3-205ENST00000463097 TAF3Q5VWG9 929 aa4.94□□□□□ -1.62
COPS3-205ENST00000463097 ZNF771Q7L3S4 317 aaPredicted RBP4.94□□□□□ -1.62
COPS3-205ENST00000463097 C16orf62Q7Z3J2 963 aa4.94□□□□□ -1.62
COPS3-205ENST00000463097 NANOGNBQ7Z5D8 188 aa4.94□□□□□ -1.62
COPS3-205ENST00000463097 HOGA1Q86XE5 327 aa4.94□□□□□ -1.62
COPS3-205ENST00000463097 TBC1D10CQ8IV04 446 aa4.94□□□□□ -1.62
COPS3-205ENST00000463097 ZNF671Q8TAW3 534 aa4.94□□□□□ -1.62
COPS3-205ENST00000463097 RPL3LQ92901 407 aaKnown RBP4.94□□□□□ -1.62
COPS3-205ENST00000463097 DLX4Q92988 240 aaPredicted RBP4.94□□□□□ -1.62
COPS3-205ENST00000463097 ANKRD27Q96NW4 1050 aa4.94□□□□□ -1.62
COPS3-205ENST00000463097 NPAS2Q99743 824 aa4.94□□□□□ -1.62
COPS3-205ENST00000463097 TMEM43Q9BTV4 400 aa4.94□□□□□ -1.62
COPS3-205ENST00000463097 PNNQ9H307 717 aaKnown RBP4.94□□□□□ -1.62
COPS3-205ENST00000463097 NCOR1P1Q9H4R4 102 aa4.94□□□□□ -1.62
COPS3-205ENST00000463097 MTHFD2LQ9H903 347 aaPredicted RBP4.94□□□□□ -1.62
COPS3-205ENST00000463097 MED20Q9H944 212 aa4.94□□□□□ -1.62
COPS3-205ENST00000463097 ZNF71Q9NQZ8 489 aaPredicted RBP4.94□□□□□ -1.62
COPS3-205ENST00000463097 PURGQ9UJV8 347 aaKnown RBP4.94□□□□□ -1.62
COPS3-205ENST00000463097 GSTK1Q9Y2Q3 226 aa4.94□□□□□ -1.62
COPS3-205ENST00000463097 ARID1BQ8NFD5 2236 aaPredicted RBP4.94□□□□□ -1.62
COPS3-205ENST00000463097 BRD4O60885 1362 aaPredicted RBP4.93□□□□□ -1.62
COPS3-205ENST00000463097 CFAP43Q8NDM7 1665 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 A0A0A6YYD4 124 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 A0A0J9YVX5 310 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 A0A0U1RQS6 177 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 IQCMA0A1B0GVH7 501 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 METTL21EPA6NDL7 271 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 HELTA6NFD8 242 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 MFSD2BA6NFX1 497 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 E9PBE3 544 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 NPIPB9F8W1W9 429 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 INPP4BO15327 924 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 TNFSF12O43508 249 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 SMAD6O43541 496 aaKnown RBP4.93□□□□□ -1.62
COPS3-205ENST00000463097 FGF17O60258 216 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 ECI2O75521 394 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 MTRF1O75570 445 aaKnown RBP4.93□□□□□ -1.62
COPS3-205ENST00000463097 CIB2O75838 187 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 FGF3P11487 239 aaPredicted RBP4.93□□□□□ -1.62
COPS3-205ENST00000463097 PAX9P55771 341 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 MRPS21P82921 87 aaKnown RBP4.93□□□□□ -1.62
COPS3-205ENST00000463097 NCBP1Q09161 790 aaKnown RBP4.93□□□□□ -1.62
COPS3-205ENST00000463097 SYPL1Q16563 259 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 PHYHD1Q5SRE7 291 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 TMEM225Q6GV28 225 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 C19orf48Q6RUI8 117 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 TMEM184AQ6ZMB5 413 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 MTERF4Q7Z6M4 381 aaKnown RBP4.93□□□□□ -1.62
COPS3-205ENST00000463097 VSTM4Q8IW00 320 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 BBS5Q8N3I7 341 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 SPEM1Q8N4L4 309 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 SYT14Q8NB59 555 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 OR4F5Q8NH21 305 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 CASKIN1Q8WXD9 1431 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 ADIPOR1Q96A54 375 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 UPRTQ96BW1 309 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 PIWIL1Q96J94 861 aaKnown RBP4.93□□□□□ -1.62
COPS3-205ENST00000463097 ELMO2Q96JJ3 720 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 PKIBQ9C010 78 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 MAGT1Q9H0U3 335 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 RHOJQ9H4E5 214 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 METTL7AQ9H8H3 244 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 NMUR1Q9HB89 426 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 C2orf42Q9NWW7 574 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 LNPEPQ9UIQ6 1025 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 EMCNQ9ULC0 261 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 SLC9A8Q9Y2E8 581 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 WDR45Q9Y484 360 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 FYCO1Q9BQS8 1478 aa4.93□□□□□ -1.62
COPS3-205ENST00000463097 NAIPQ13075 1403 aa4.92□□□□□ -1.62
COPS3-205ENST00000463097 FGD6Q6ZV73 1430 aa4.92□□□□□ -1.62
COPS3-205ENST00000463097 TRAV26-1A0A087WT03 109 aa4.92□□□□□ -1.62
COPS3-205ENST00000463097 LRIT2A6NDA9 550 aa4.92□□□□□ -1.62
COPS3-205ENST00000463097 PCP4L1A6NKN8 68 aa4.92□□□□□ -1.62
COPS3-205ENST00000463097 ZNF716A6NP11 495 aa4.92□□□□□ -1.62
COPS3-205ENST00000463097 CYB561D2O14569 222 aa4.92□□□□□ -1.62
COPS3-205ENST00000463097 DUX1O43812 170 aa4.92□□□□□ -1.62
COPS3-205ENST00000463097 LCMT2O60294 686 aaKnown RBP4.92□□□□□ -1.62
COPS3-205ENST00000463097 RHBDL1O75783 438 aa4.92□□□□□ -1.62
COPS3-205ENST00000463097 CEACAM4O75871 244 aa4.92□□□□□ -1.62
COPS3-205ENST00000463097 IGSF6O95976 241 aa4.92□□□□□ -1.62
COPS3-205ENST00000463097 PRSS1P07477 247 aa4.92□□□□□ -1.62
COPS3-205ENST00000463097 ZNF735P0CB33 412 aa4.92□□□□□ -1.62
COPS3-205ENST00000463097 NCF2P19878 526 aaPredicted RBP4.92□□□□□ -1.62
COPS3-205ENST00000463097 RPL9P32969 192 aaKnown RBP4.92□□□□□ -1.62
COPS3-205ENST00000463097 PLA2G16P53816 162 aa4.92□□□□□ -1.62
COPS3-205ENST00000463097 RPL23AP62750 156 aaKnown RBP4.92□□□□□ -1.62
COPS3-205ENST00000463097 ARL16Q0P5N6 197 aa4.92□□□□□ -1.62
COPS3-205ENST00000463097 MXD4Q14582 209 aaPredicted RBP4.92□□□□□ -1.62
COPS3-205ENST00000463097 MAPK6Q16659 721 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms