RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 EXOC3L1Q86VI1 746 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 PACS2Q86VP3 889 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 TDRPQ86YL5 185 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 P3H2Q8IVL5 708 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 WDSUB1Q8N9V3 476 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 RDH11Q8TC12 318 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 UBTD2Q8WUN7 234 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 DYDC1Q8WWB3 177 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 TP53INP1Q96A56 240 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 PERPQ96FX8 193 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 CHMP6Q96FZ7 201 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 WFIKKN1Q96NZ8 548 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 GPR22Q99680 433 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 REPIN1Q9BWE0 567 aaKnown RBP14.24□□□□□ -0.13
SND1-203ENST00000463020 SFXN3Q9BWM7 321 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 OR10A5Q9H207 317 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 CCDC134Q9H6E4 229 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 MS4A12Q9NXJ0 267 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 KLHL28Q9NXS3 571 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 NKIRAS1Q9NYS0 192 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 MED12LQ86YW9 2145 aa14.23□□□□□ -0.13
SND1-203ENST00000463020 H0Y3Z8 333 aa14.23□□□□□ -0.13
SND1-203ENST00000463020 K7EPI3 171 aa14.23□□□□□ -0.13
SND1-203ENST00000463020 SMPD2O60906 423 aa14.23□□□□□ -0.13
SND1-203ENST00000463020 RCBTB2O95199 551 aa14.23□□□□□ -0.13
SND1-203ENST00000463020 GOSR1O95249 250 aa14.23□□□□□ -0.13
SND1-203ENST00000463020 CYP4B1P13584 511 aa14.23□□□□□ -0.13
SND1-203ENST00000463020 MTHFD2P13995 350 aa14.23□□□□□ -0.13
SND1-203ENST00000463020 CPN1P15169 458 aa14.23□□□□□ -0.13
SND1-203ENST00000463020 LOXP28300 417 aaPredicted RBP14.23□□□□□ -0.13
SND1-203ENST00000463020 PIK3CGP48736 1102 aa14.23□□□□□ -0.13
SND1-203ENST00000463020 SLC12A2P55011 1212 aa14.23□□□□□ -0.13
SND1-203ENST00000463020 ATP6V0D1P61421 351 aa14.23□□□□□ -0.13
SND1-203ENST00000463020 DUSP2Q05923 314 aa14.23□□□□□ -0.13
SND1-203ENST00000463020 MGAT2Q10469 447 aa14.23□□□□□ -0.13
SND1-203ENST00000463020 UBAP2Q5T6F2 1119 aaKnown RBP14.23□□□□□ -0.13
SND1-203ENST00000463020 GKAP1Q5VSY0 366 aaPredicted RBP14.23□□□□□ -0.13
SND1-203ENST00000463020 GALNT12Q8IXK2 581 aa14.23□□□□□ -0.13
SND1-203ENST00000463020 ZBED8Q8IZ13 594 aa14.23□□□□□ -0.13
SND1-203ENST00000463020 TEX9Q8N6V9 391 aa14.23□□□□□ -0.13
SND1-203ENST00000463020 PYROXD1Q8WU10 500 aa14.23□□□□□ -0.13
SND1-203ENST00000463020 ISL2Q96A47 359 aa14.23□□□□□ -0.13
SND1-203ENST00000463020 CTHRC1Q96CG8 243 aa14.23□□□□□ -0.13
SND1-203ENST00000463020 MARK4Q96L34 752 aa14.23□□□□□ -0.13
SND1-203ENST00000463020 SECISBP2Q96T21 854 aaKnown RBP14.23□□□□□ -0.13
SND1-203ENST00000463020 RBBP8Q99708 897 aa14.23□□□□□ -0.13
SND1-203ENST00000463020 DDX31Q9H8H2 851 aaKnown RBP14.23□□□□□ -0.13
SND1-203ENST00000463020 UBTD1Q9HAC8 227 aa14.23□□□□□ -0.13
SND1-203ENST00000463020 KCNK9Q9NPC2 374 aa14.23□□□□□ -0.13
SND1-203ENST00000463020 SNX15Q9NRS6 342 aa14.23□□□□□ -0.13
SND1-203ENST00000463020 SENP1Q9P0U3 644 aa14.23□□□□□ -0.13
SND1-203ENST00000463020 FETUBQ9UGM5 382 aa14.23□□□□□ -0.13
SND1-203ENST00000463020 RTTNQ86VV8 2226 aa14.23□□□□□ -0.13
SND1-203ENST00000463020 RAI1Q7Z5J4 1906 aaPredicted RBP14.23□□□□□ -0.13
SND1-203ENST00000463020 SONP18583 2426 aaKnown RBP14.22□□□□□ -0.13
SND1-203ENST00000463020 A0A1W2PNV4 684 aa14.22□□□□□ -0.13
SND1-203ENST00000463020 A8MXE2 369 aa14.22□□□□□ -0.13
SND1-203ENST00000463020 SUPT3HB4E1H0 165 aa14.22□□□□□ -0.13
SND1-203ENST00000463020 ICOSLGO75144 302 aa14.22□□□□□ -0.13
SND1-203ENST00000463020 NME6O75414 186 aaPredicted RBP14.22□□□□□ -0.13
SND1-203ENST00000463020 SUPT3HO75486 399 aa14.22□□□□□ -0.13
SND1-203ENST00000463020 NID1P14543 1247 aa14.22□□□□□ -0.13
SND1-203ENST00000463020 STMN1P16949 149 aa14.22□□□□□ -0.13
SND1-203ENST00000463020 TCEA1P23193 301 aaKnown RBP14.22□□□□□ -0.13
SND1-203ENST00000463020 TLX1P31314 330 aaPredicted RBP14.22□□□□□ -0.13
SND1-203ENST00000463020 GALNSP34059 522 aa14.22□□□□□ -0.13
SND1-203ENST00000463020 BUD31P41223 144 aaPredicted RBP14.22□□□□□ -0.13
SND1-203ENST00000463020 PIK3CBP42338 1070 aa14.22□□□□□ -0.13
SND1-203ENST00000463020 LHX2P50458 406 aa14.22□□□□□ -0.13
SND1-203ENST00000463020 GFRA1P56159 465 aa14.22□□□□□ -0.13
SND1-203ENST00000463020 KRTAP1-1Q07627 177 aa14.22□□□□□ -0.13
SND1-203ENST00000463020 RCAN2Q14206 197 aa14.22□□□□□ -0.13
SND1-203ENST00000463020 EXOSC7Q15024 291 aaKnown RBP14.22□□□□□ -0.13
SND1-203ENST00000463020 SETDB1Q15047 1291 aa14.22□□□□□ -0.13
SND1-203ENST00000463020 RASA2Q15283 850 aa14.22□□□□□ -0.13
SND1-203ENST00000463020 VWA1Q6PCB0 445 aa14.22□□□□□ -0.13
SND1-203ENST00000463020 FAM111BQ6SJ93 734 aa14.22□□□□□ -0.13
SND1-203ENST00000463020 MYLK4Q86YV6 388 aaPredicted RBP14.22□□□□□ -0.13
SND1-203ENST00000463020 TRIM42Q8IWZ5 723 aa14.22□□□□□ -0.13
SND1-203ENST00000463020 LRRC75A-AS1Q8N1F1 130 aa14.22□□□□□ -0.13
SND1-203ENST00000463020 OR1J4Q8NGS1 313 aa14.22□□□□□ -0.13
SND1-203ENST00000463020 UBE2E3Q969T4 207 aa14.22□□□□□ -0.13
SND1-203ENST00000463020 PIK3IP1Q96FE7 263 aa14.22□□□□□ -0.13
SND1-203ENST00000463020 PELOQ9BRX2 385 aaKnown RBP14.22□□□□□ -0.13
SND1-203ENST00000463020 ITPAQ9BY32 194 aa14.22□□□□□ -0.13
SND1-203ENST00000463020 NUDT4Q9NZJ9 180 aa14.22□□□□□ -0.13
SND1-203ENST00000463020 OPTCQ9UBM4 332 aa14.22□□□□□ -0.13
SND1-203ENST00000463020 HEY2Q9UBP5 337 aa14.22□□□□□ -0.13
SND1-203ENST00000463020 TRPS1Q9UHF7 1281 aa14.22□□□□□ -0.13
SND1-203ENST00000463020 FBXL2Q9UKC9 423 aa14.22□□□□□ -0.13
SND1-203ENST00000463020 UGT2B11O75310 529 aa14.21□□□□□ -0.13
SND1-203ENST00000463020 PPM1BO75688 479 aa14.21□□□□□ -0.13
SND1-203ENST00000463020 ACTL6AO96019 429 aa14.21□□□□□ -0.13
SND1-203ENST00000463020 S100BP04271 92 aaPredicted RBP14.21□□□□□ -0.13
SND1-203ENST00000463020 DRD4P21917 467 aa14.21□□□□□ -0.13
SND1-203ENST00000463020 SERPINB1P30740 379 aa14.21□□□□□ -0.13
SND1-203ENST00000463020 CLDN18P56856 261 aa14.21□□□□□ -0.13
SND1-203ENST00000463020 CORO7P57737 925 aa14.21□□□□□ -0.13
SND1-203ENST00000463020 RAB10P61026 200 aa14.21□□□□□ -0.13
SND1-203ENST00000463020 IRF9Q00978 393 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms