RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 CDK9P50750 372 aaKnown RBP17.31■□□□□ 0.36
COL5A1-203ENST00000460264 C2orf80Q0P641 193 aa17.31■□□□□ 0.36
COL5A1-203ENST00000460264 PRSS53Q2L4Q9 553 aa17.31■□□□□ 0.36
COL5A1-203ENST00000460264 ERCC6LQ2NKX8 1250 aa17.31■□□□□ 0.36
COL5A1-203ENST00000460264 C1orf185Q5T7R7 199 aa17.31■□□□□ 0.36
COL5A1-203ENST00000460264 FAM71E1Q6IPT2 247 aa17.31■□□□□ 0.36
COL5A1-203ENST00000460264 TMEM81Q6P7N7 255 aa17.31■□□□□ 0.36
COL5A1-203ENST00000460264 NUP54Q7Z3B4 507 aa17.31■□□□□ 0.36
COL5A1-203ENST00000460264 SRRM1Q8IYB3 904 aaKnown RBP17.31■□□□□ 0.36
COL5A1-203ENST00000460264 LIX1Q8N485 282 aa17.31■□□□□ 0.36
COL5A1-203ENST00000460264 BANPQ8N9N5 519 aa17.31■□□□□ 0.36
COL5A1-203ENST00000460264 OR7G2Q8NG99 324 aa17.31■□□□□ 0.36
COL5A1-203ENST00000460264 AENQ8WTP8 325 aaKnown RBP17.31■□□□□ 0.36
COL5A1-203ENST00000460264 GNRHR2Q96P88 292 aa17.31■□□□□ 0.36
COL5A1-203ENST00000460264 BBS4Q96RK4 519 aa17.31■□□□□ 0.36
COL5A1-203ENST00000460264 NODALQ96S42 347 aa17.31■□□□□ 0.36
COL5A1-203ENST00000460264 GATA5Q9BWX5 397 aaPredicted RBP17.31■□□□□ 0.36
COL5A1-203ENST00000460264 IQCGQ9H095 443 aaKnown RBP17.31■□□□□ 0.36
COL5A1-203ENST00000460264 MIEF1Q9NQG6 463 aa17.31■□□□□ 0.36
COL5A1-203ENST00000460264 SENP1Q9P0U3 644 aa17.31■□□□□ 0.36
COL5A1-203ENST00000460264 PTGDR2Q9Y5Y4 395 aa17.31■□□□□ 0.36
COL5A1-203ENST00000460264 PDZD2O15018 2839 aa17.3■□□□□ 0.36
COL5A1-203ENST00000460264 FAM90A27PA6NNH2 459 aa17.3■□□□□ 0.36
COL5A1-203ENST00000460264 MYO1GB0I1T2 1018 aa17.3■□□□□ 0.36
COL5A1-203ENST00000460264 PLOD3O60568 738 aa17.3■□□□□ 0.36
COL5A1-203ENST00000460264 UGT2B11O75310 529 aa17.3■□□□□ 0.36
COL5A1-203ENST00000460264 NME6O75414 186 aaPredicted RBP17.3■□□□□ 0.36
COL5A1-203ENST00000460264 HPNP05981 417 aa17.3■□□□□ 0.36
COL5A1-203ENST00000460264 PRPH2P23942 346 aa17.3■□□□□ 0.36
COL5A1-203ENST00000460264 ELAVL4P26378 380 aaKnown RBP17.3■□□□□ 0.36
COL5A1-203ENST00000460264 MPIP34949 423 aa17.3■□□□□ 0.36
COL5A1-203ENST00000460264 CORO7P57737 925 aa17.3■□□□□ 0.36
COL5A1-203ENST00000460264 TIGD3Q6B0B8 471 aa17.3■□□□□ 0.36
COL5A1-203ENST00000460264 NOXRED1Q6NXP6 359 aa17.3■□□□□ 0.36
COL5A1-203ENST00000460264 LURAP1LQ8IV03 231 aa17.3■□□□□ 0.36
COL5A1-203ENST00000460264 ZNF295-AS1Q8N0V1 137 aa17.3■□□□□ 0.36
COL5A1-203ENST00000460264 TMBIM1Q969X1 311 aa17.3■□□□□ 0.36
COL5A1-203ENST00000460264 METTL2AQ96IZ6 378 aaKnown RBP17.3■□□□□ 0.36
COL5A1-203ENST00000460264 VSTM2LQ96N03 204 aa17.3■□□□□ 0.36
COL5A1-203ENST00000460264 SPOCK3Q9BQ16 436 aa17.3■□□□□ 0.36
COL5A1-203ENST00000460264 TRMOQ9BU70 441 aa17.3■□□□□ 0.36
COL5A1-203ENST00000460264 OSBPL11Q9BXB4 747 aa17.3■□□□□ 0.36
COL5A1-203ENST00000460264 ENKD1Q9H0I2 346 aa17.3■□□□□ 0.36
COL5A1-203ENST00000460264 FOLH1BQ9HBA9 442 aa17.3■□□□□ 0.36
COL5A1-203ENST00000460264 TAS2R7Q9NYW3 318 aa17.3■□□□□ 0.36
COL5A1-203ENST00000460264 EXO1Q9UQ84 846 aaKnown RBP17.3■□□□□ 0.36
COL5A1-203ENST00000460264 WBP11Q9Y2W2 641 aaKnown RBP17.3■□□□□ 0.36
COL5A1-203ENST00000460264 PCDHGB3Q9Y5G1 929 aa17.3■□□□□ 0.36
COL5A1-203ENST00000460264 C15orf38-AP3S2A0A0A6YYH1 394 aa17.29■□□□□ 0.36
COL5A1-203ENST00000460264 NKX2-6A6NCS4 301 aa17.29■□□□□ 0.36
COL5A1-203ENST00000460264 OR6C70A6NIJ9 312 aa17.29■□□□□ 0.36
COL5A1-203ENST00000460264 NPIPB8E9PQR5 432 aa17.29■□□□□ 0.36
COL5A1-203ENST00000460264 AZIN1O14977 448 aa17.29■□□□□ 0.36
COL5A1-203ENST00000460264 TRIM13O60858 407 aa17.29■□□□□ 0.36
COL5A1-203ENST00000460264 ERN1O75460 977 aaKnown RBP17.29■□□□□ 0.36
COL5A1-203ENST00000460264 TRAPPC6AO75865 159 aa17.29■□□□□ 0.36
COL5A1-203ENST00000460264 JUNP05412 331 aaKnown RBP17.29■□□□□ 0.36
COL5A1-203ENST00000460264 HOXD4P09016 255 aaPredicted RBP17.29■□□□□ 0.36
COL5A1-203ENST00000460264 CT45A8P0DMV1 189 aa17.29■□□□□ 0.36
COL5A1-203ENST00000460264 CT45A9P0DMV2 189 aa17.29■□□□□ 0.36
COL5A1-203ENST00000460264 GABRA1P14867 456 aa17.29■□□□□ 0.36
COL5A1-203ENST00000460264 PTPN6P29350 595 aa17.29■□□□□ 0.36
COL5A1-203ENST00000460264 PTGDSP41222 190 aa17.29■□□□□ 0.36
COL5A1-203ENST00000460264 TFF3Q07654 80 aa17.29■□□□□ 0.36
COL5A1-203ENST00000460264 CRYZQ08257 329 aaKnown RBP17.29■□□□□ 0.36
COL5A1-203ENST00000460264 IFFO1Q0D2I5 559 aa17.29■□□□□ 0.36
COL5A1-203ENST00000460264 SNTA1Q13424 505 aa17.29■□□□□ 0.36
COL5A1-203ENST00000460264 KIAA0040Q15053 153 aa17.29■□□□□ 0.36
COL5A1-203ENST00000460264 CT45A2Q5DJT8 189 aa17.29■□□□□ 0.36
COL5A1-203ENST00000460264 SLC30A6Q6NXT4 461 aa17.29■□□□□ 0.36
COL5A1-203ENST00000460264 EMBQ6PCB8 327 aa17.29■□□□□ 0.36
COL5A1-203ENST00000460264 ANGPTL8Q6UXH0 198 aa17.29■□□□□ 0.36
COL5A1-203ENST00000460264 NPSR1Q6W5P4 371 aa17.29■□□□□ 0.36
COL5A1-203ENST00000460264 IKBIPQ70UQ0 350 aa17.29■□□□□ 0.36
COL5A1-203ENST00000460264 ULK2Q8IYT8 1036 aa17.29■□□□□ 0.36
COL5A1-203ENST00000460264 COL21A1Q96P44 957 aa17.29■□□□□ 0.36
COL5A1-203ENST00000460264 TREX2Q9BQ50 279 aaPredicted RBP17.29■□□□□ 0.36
COL5A1-203ENST00000460264 UCK2Q9BZX2 261 aa17.29■□□□□ 0.36
COL5A1-203ENST00000460264 STMN4Q9H169 189 aaPredicted RBP17.29■□□□□ 0.36
COL5A1-203ENST00000460264 GALNT9Q9HCQ5 603 aa17.29■□□□□ 0.36
COL5A1-203ENST00000460264 NPDC1Q9NQX5 325 aaPredicted RBP17.29■□□□□ 0.36
COL5A1-203ENST00000460264 ALKBH4Q9NXW9 302 aa17.29■□□□□ 0.36
COL5A1-203ENST00000460264 SLC17A7Q9P2U7 560 aa17.29■□□□□ 0.36
COL5A1-203ENST00000460264 A0A0G2JNJ9 132 aa17.28■□□□□ 0.36
COL5A1-203ENST00000460264 PRAMEF25A6NGN4 478 aa17.28■□□□□ 0.36
COL5A1-203ENST00000460264 SLC28A1O00337 649 aa17.28■□□□□ 0.36
COL5A1-203ENST00000460264 GNB5O14775 395 aa17.28■□□□□ 0.36
COL5A1-203ENST00000460264 SNPHO15079 494 aa17.28■□□□□ 0.36
COL5A1-203ENST00000460264 ICOSLGO75144 302 aa17.28■□□□□ 0.36
COL5A1-203ENST00000460264 SEC22BO75396 215 aa17.28■□□□□ 0.36
COL5A1-203ENST00000460264 TOXO94900 526 aa17.28■□□□□ 0.36
COL5A1-203ENST00000460264 IGFBP2P18065 325 aa17.28■□□□□ 0.36
COL5A1-203ENST00000460264 ALDH3A1P30838 453 aa17.28■□□□□ 0.36
COL5A1-203ENST00000460264 ADH7P40394 386 aa17.28■□□□□ 0.36
COL5A1-203ENST00000460264 MC3RP41968 323 aa17.28■□□□□ 0.36
COL5A1-203ENST00000460264 NCBP2P52298 156 aaKnown RBP eCLIP17.28■□□□□ 0.36
COL5A1-203ENST00000460264 KANK2Q63ZY3 851 aa17.28■□□□□ 0.36
COL5A1-203ENST00000460264 WDR93Q6P2C0 686 aa17.28■□□□□ 0.36
COL5A1-203ENST00000460264 MEX3BQ6ZN04 569 aaKnown RBP17.28■□□□□ 0.36
COL5A1-203ENST00000460264 RNF165Q6ZSG1 346 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms