RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 C4BP0C0L5 1744 aa8.49□□□□□ -1.05
SHROOM4-203ENST00000460112 POLEQ07864 2286 aa8.49□□□□□ -1.05
SHROOM4-203ENST00000460112 OR2B3O76000 313 aa8.49□□□□□ -1.05
SHROOM4-203ENST00000460112 PNMTP11086 282 aa8.49□□□□□ -1.05
SHROOM4-203ENST00000460112 CHATP28329 748 aa8.49□□□□□ -1.05
SHROOM4-203ENST00000460112 HLCSP50747 726 aa8.49□□□□□ -1.05
SHROOM4-203ENST00000460112 Q6ZVU0 165 aa8.49□□□□□ -1.05
SHROOM4-203ENST00000460112 TICAM1Q8IUC6 712 aa8.49□□□□□ -1.05
SHROOM4-203ENST00000460112 NDRG1Q92597 394 aaKnown RBP8.49□□□□□ -1.05
SHROOM4-203ENST00000460112 LRCH3Q96II8 777 aa8.49□□□□□ -1.05
SHROOM4-203ENST00000460112 MAELQ96JY0 434 aaKnown RBP8.49□□□□□ -1.05
SHROOM4-203ENST00000460112 PITX2Q99697 317 aa8.49□□□□□ -1.05
SHROOM4-203ENST00000460112 PAQR5Q9NXK6 330 aaPredicted RBP8.49□□□□□ -1.05
SHROOM4-203ENST00000460112 ACSL6Q9UKU0 697 aa8.49□□□□□ -1.05
SHROOM4-203ENST00000460112 NME7Q9Y5B8 376 aa8.49□□□□□ -1.05
SHROOM4-203ENST00000460112 SCN1AP35498 2009 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 GMDSO60547 372 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 PIAS1O75925 651 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 HTR1EP28566 365 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 FOLR3P41439 243 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 PITPNBP48739 271 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 SPATC1Q76KD6 591 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 PTCHD1Q96NR3 888 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 CDK15Q96Q40 435 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 NT5DC2Q9H857 520 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 PCDHB10Q9UN67 800 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 RIPK3Q9Y572 518 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 DOCK11Q5JSL3 2073 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 HEXAP06865 529 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 C6P13671 934 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 TSFMP43897 325 aaKnown RBP8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 ZC3H3Q8IXZ2 948 aaKnown RBP8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 GLIS3Q8NEA6 775 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 OR7G2Q8NG99 324 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 OR4F6Q8NGB9 312 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 SORCS1Q8WY21 1168 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 SLC25A44Q96H78 314 aaPredicted RBP8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 HBEGFQ99075 208 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 ZNF416Q9BWM5 594 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 CTPS2Q9NRF8 586 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 CCM2LQ9NUG4 571 aaPredicted RBP8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 NPAP1Q9NZP6 1156 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 PCTPQ9UKL6 214 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 A8MVJ9 347 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 TOR1AO14656 332 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 GABRA3P34903 492 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 PCBD1P61457 104 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 HNRNPKP61978 463 aaKnown RBP eCLIP8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 FAM198BQ6UWH4 519 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 TMEM151BQ8IW70 566 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 CSNK1A1LQ8N752 337 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 ZNF681Q96N22 645 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 SACM1LQ9NTJ5 587 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 ARMC1Q9NVT9 282 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 MCTS1Q9ULC4 181 aaKnown RBP8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 HS3ST4Q9Y661 456 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 E7ESA3 106 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 SNCGO76070 127 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 SOD2P04179 222 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 RPL17P18621 184 aaKnown RBP8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 ACRV1P26436 265 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 PTPRCAPQ14761 206 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 IL17AQ16552 155 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 METAP1DQ6UB28 335 aaPredicted RBP8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 ESX1Q8N693 406 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 C2CD4AQ8NCU7 369 aaPredicted RBP8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 OR9K2Q8NGE7 335 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 ZNF578Q96N58 590 aaPredicted RBP8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 BARD1Q99728 777 aaKnown RBP8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 PRMT8Q9NR22 394 aaPredicted RBP8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 DLGAP4Q9Y2H0 992 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 ECM29Q5VYK3 1845 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 INMT-MINDY4F8WBC2 141 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 PRAMEF11O60813 436 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 RAB3BP20337 219 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 PRPH2P23942 346 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 AK4P27144 223 aaPredicted RBP8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 HK3P52790 923 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 CSNK2A1P68400 391 aaPredicted RBP8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 HYAL2Q12891 473 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 MADCAM1Q13477 382 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 CLVS2Q5SYC1 327 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 GPR157Q5UAW9 335 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 MANEALQ5VSG8 457 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 TMPRSS12Q86WS5 348 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 TMEM173Q86WV6 379 aaPredicted RBP8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 MAL2Q969L2 176 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 APMAPQ9HDC9 416 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 COL2A1P02458 1487 aaPredicted RBP8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 FAM227AF5H4B4 570 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 UBFD1O14562 309 aaKnown RBP8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 SGCEO43556 437 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 SEC14L2O76054 403 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 ZNF28P17035 718 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 BATFQ16520 125 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 ABHD17BQ5VST6 288 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 KCNIP4Q6PIL6 250 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 PDZD9Q8IXQ8 264 aa8.48□□□□□ -1.05
SHROOM4-203ENST00000460112 ZNF808Q8N4W9 903 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms