RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 P2RX7Q99572 595 aaKnown RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 BARD1Q99728 777 aaKnown RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 HSFX1Q9UBD0 423 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 RASD1Q9Y272 281 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 RAI2Q9Y5P3 530 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 NRAPQ86VF7 1730 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 SLC43A1O75387 559 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 TFP02787 698 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 SPI1P17947 270 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 DTYMKP23919 212 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 PRPH2P23942 346 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 TMEM135Q86UB9 458 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 OR4K2Q8NGD2 314 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 M1APQ8TC57 530 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 THAP4Q8WY91 577 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 FAM46BQ96A09 425 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 MAP6Q96JE9 813 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 EIF5A2Q9GZV4 153 aaKnown RBP4.98□□□□□ -1.61
CSMD3-204ENST00000455883 FAM105AQ9NUU6 356 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 KPTNQ9Y664 436 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 PHLPP1O60346 1717 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 ADAMTSL3P82987 1691 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 CCL15-CCL14A0A0B4J2E2 113 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 C12orf71A8MTZ7 269 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 RTCAO00442 366 aaKnown RBP4.98□□□□□ -1.61
CSMD3-204ENST00000455883 NUDT21O43809 227 aaKnown RBP4.98□□□□□ -1.61
CSMD3-204ENST00000455883 PIP5K1CO60331 668 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 PGAM2P15259 253 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 RFX2P48378 723 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 MFGE8Q08431 387 aaPredicted RBP4.98□□□□□ -1.61
CSMD3-204ENST00000455883 SCGB2A2Q13296 93 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 SNTB1Q13884 538 aaKnown RBP4.98□□□□□ -1.61
CSMD3-204ENST00000455883 MLC1Q15049 377 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 CCL15Q16663 113 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 OR5L1Q8NGL2 311 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 TFAP2CQ92754 450 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 ZCCHC3Q9NUD5 404 aaKnown RBP4.98□□□□□ -1.61
CSMD3-204ENST00000455883 SCN7AQ01118 1682 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 OR6C6A6NF89 314 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 SYT7O43581 403 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 CPOXP36551 454 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 CLDN8P56748 225 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 POU4F3Q15319 338 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 SLC2A7Q6PXP3 512 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 ZCCHC23Q6ZST2 131 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 GLB1L2Q8IW92 636 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 SLC30A7Q8NEW0 376 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 OR51L1Q8NGJ5 315 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 MR1Q95460 341 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 CLSTN3Q9BQT9 956 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 NAA11Q9BSU3 229 aaPredicted RBP4.98□□□□□ -1.61
CSMD3-204ENST00000455883 LMF2Q9BU23 707 aaKnown RBP4.98□□□□□ -1.61
CSMD3-204ENST00000455883 B3GNT4Q9C0J1 378 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 MOB1AQ9H8S9 216 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 CA12O43570 354 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 SDC3O75056 442 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 CTXN2P0C2S0 81 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 NTRK2Q16620 822 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 CRY2Q49AN0 593 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 SOHLH1Q5JUK2 328 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 FAM171A1Q5VUB5 890 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 CEACAM20Q6UY09 585 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 CNTN4Q8IWV2 1026 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 RNF148Q8N7C7 305 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF461Q8TAF7 563 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 UBL7Q96S82 380 aaPredicted RBP4.98□□□□□ -1.61
CSMD3-204ENST00000455883 SACM1LQ9NTJ5 587 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 PAQR5Q9NXK6 330 aaPredicted RBP4.98□□□□□ -1.61
CSMD3-204ENST00000455883 NDRG3Q9UGV2 375 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 ADAM18Q9Y3Q7 739 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 OR5K3A6NET4 321 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 LYRM1O43325 122 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 TSPAN3O60637 253 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 SHMT2P34897 504 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 PTGIRP43119 386 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 CD83Q01151 205 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 NRG1Q02297 640 aaPredicted RBP4.98□□□□□ -1.61
CSMD3-204ENST00000455883 TGFBR3Q03167 851 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 GBX1Q14549 363 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 NFIXQ14938 502 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 AVPI1Q5T686 147 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 GTF2H5Q6ZYL4 71 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 ESX1Q8N693 406 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 CD300LFQ8TDQ1 290 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 LRTOMTQ8WZ04 291 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF566Q969W8 418 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 NICN1Q9BSH3 213 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 TDRD3Q9H7E2 651 aaKnown RBP4.98□□□□□ -1.61
CSMD3-204ENST00000455883 DKKL1Q9UK85 242 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 FBXW11Q9UKB1 542 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 PLEKHM1Q9Y4G2 1056 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 V9GYS6 101 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 SIPA1L1O43166 1804 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 ANAPC1Q9H1A4 1944 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 PMS2P2O95744 297 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 DBIP07108 87 aaKnown RBP4.98□□□□□ -1.61
CSMD3-204ENST00000455883 G0S2P27469 103 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 RELAQ04206 551 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 YOD1Q5VVQ6 348 aaPredicted RBP4.98□□□□□ -1.61
CSMD3-204ENST00000455883 IL17RCQ8NAC3 791 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms