RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 ADH7P40394 386 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 EMDP50402 254 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 CDK9P50750 372 aaKnown RBP11.79□□□□□ -0.52
CHD3-206ENST00000452447 NAGLUP54802 743 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 SNTA1Q13424 505 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 SF3B4Q15427 424 aaKnown RBP eCLIP11.79□□□□□ -0.52
CHD3-206ENST00000452447 ERCC6LQ2NKX8 1250 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 SLC25A35Q3KQZ1 300 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 ZNF628Q5EBL2 1059 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 RIPPLY2Q5TAB7 128 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 FNDC7Q5VTL7 733 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 SLC30A6Q6NXT4 461 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 ANGPTL8Q6UXH0 198 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 WDR53Q7Z5U6 358 aaPredicted RBP11.79□□□□□ -0.52
CHD3-206ENST00000452447 PM20D2Q8IYS1 436 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 OR9A2Q8NGT5 310 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 CDC26Q8NHZ8 85 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 KAT2AQ92830 837 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 ERP27Q96DN0 273 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 BBS4Q96RK4 519 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 MIEF1Q9NQG6 463 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 SLC35C2Q9NQQ7 365 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 EHD3Q9NZN3 535 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 SERTM1A2A2V5 107 aa11.78□□□□□ -0.52
CHD3-206ENST00000452447 FRG2CA6NGY1 282 aa11.78□□□□□ -0.52
CHD3-206ENST00000452447 HSPB2A8KAH6 182 aa11.78□□□□□ -0.52
CHD3-206ENST00000452447 UBFD1O14562 309 aaKnown RBP11.78□□□□□ -0.52
CHD3-206ENST00000452447 TO15178 435 aa11.78□□□□□ -0.52
CHD3-206ENST00000452447 ICOSLGO75144 302 aa11.78□□□□□ -0.52
CHD3-206ENST00000452447 REM1O75628 298 aa11.78□□□□□ -0.52
CHD3-206ENST00000452447 PROCP04070 461 aa11.78□□□□□ -0.52
CHD3-206ENST00000452447 SHBGP04278 402 aa11.78□□□□□ -0.52
CHD3-206ENST00000452447 CRHR1P34998 444 aa11.78□□□□□ -0.52
CHD3-206ENST00000452447 GCKP35557 465 aa11.78□□□□□ -0.52
CHD3-206ENST00000452447 SOX18P35713 384 aa11.78□□□□□ -0.52
CHD3-206ENST00000452447 KRT20P35900 424 aa11.78□□□□□ -0.52
CHD3-206ENST00000452447 FOXA1P55317 472 aa11.78□□□□□ -0.52
CHD3-206ENST00000452447 CRYZQ08257 329 aaKnown RBP11.78□□□□□ -0.52
CHD3-206ENST00000452447 ZNF763Q0D2J5 394 aa11.78□□□□□ -0.52
CHD3-206ENST00000452447 HSPB2Q16082 182 aa11.78□□□□□ -0.52
CHD3-206ENST00000452447 TMEM81Q6P7N7 255 aa11.78□□□□□ -0.52
CHD3-206ENST00000452447 LIX1LQ8IVB5 337 aa11.78□□□□□ -0.52
CHD3-206ENST00000452447 DMRTC2Q8IXT2 367 aaPredicted RBP11.78□□□□□ -0.52
CHD3-206ENST00000452447 LRRN4CLQ8ND94 238 aa11.78□□□□□ -0.52
CHD3-206ENST00000452447 HGDQ93099 445 aa11.78□□□□□ -0.52
CHD3-206ENST00000452447 TMBIM1Q969X1 311 aa11.78□□□□□ -0.52
CHD3-206ENST00000452447 TMCO6Q96DC7 493 aa11.78□□□□□ -0.52
CHD3-206ENST00000452447 NODALQ96S42 347 aa11.78□□□□□ -0.52
CHD3-206ENST00000452447 TIMP4Q99727 224 aa11.78□□□□□ -0.52
CHD3-206ENST00000452447 OSBPL11Q9BXB4 747 aa11.78□□□□□ -0.52
CHD3-206ENST00000452447 SHCBP1LQ9BZQ2 653 aa11.78□□□□□ -0.52
CHD3-206ENST00000452447 RRAGDQ9NQL2 400 aaPredicted RBP11.78□□□□□ -0.52
CHD3-206ENST00000452447 SIRT5Q9NXA8 310 aa11.78□□□□□ -0.52
CHD3-206ENST00000452447 GPR55Q9Y2T6 319 aaPredicted RBP11.78□□□□□ -0.52
CHD3-206ENST00000452447 SLC6A5Q9Y345 797 aa11.78□□□□□ -0.52
CHD3-206ENST00000452447 C2orf72A6NCS6 295 aa11.77□□□□□ -0.53
CHD3-206ENST00000452447 OR6C70A6NIJ9 312 aa11.77□□□□□ -0.53
CHD3-206ENST00000452447 COPEO14579 308 aa11.77□□□□□ -0.53
CHD3-206ENST00000452447 PLIN3O60664 434 aa11.77□□□□□ -0.53
CHD3-206ENST00000452447 ABCB7O75027 752 aa11.77□□□□□ -0.53
CHD3-206ENST00000452447 UGT2B11O75310 529 aa11.77□□□□□ -0.53
CHD3-206ENST00000452447 ERN1O75460 977 aaKnown RBP11.77□□□□□ -0.53
CHD3-206ENST00000452447 KRT4P19013 534 aa11.77□□□□□ -0.53
CHD3-206ENST00000452447 DDCP20711 480 aa11.77□□□□□ -0.53
CHD3-206ENST00000452447 PTPN6P29350 595 aa11.77□□□□□ -0.53
CHD3-206ENST00000452447 DNAJB13P59910 316 aa11.77□□□□□ -0.53
CHD3-206ENST00000452447 KRTAP10-9P60411 292 aa11.77□□□□□ -0.53
CHD3-206ENST00000452447 C2orf80Q0P641 193 aa11.77□□□□□ -0.53
CHD3-206ENST00000452447 EIPR1Q53HC9 387 aa11.77□□□□□ -0.53
CHD3-206ENST00000452447 CES4AQ5XG92 561 aa11.77□□□□□ -0.53
CHD3-206ENST00000452447 VASNQ6EMK4 673 aa11.77□□□□□ -0.53
CHD3-206ENST00000452447 DESI1Q6ICB0 168 aa11.77□□□□□ -0.53
CHD3-206ENST00000452447 FRMD7Q6ZUT3 714 aa11.77□□□□□ -0.53
CHD3-206ENST00000452447 SH2D5Q6ZV89 423 aa11.77□□□□□ -0.53
CHD3-206ENST00000452447 TDRPQ86YL5 185 aa11.77□□□□□ -0.53
CHD3-206ENST00000452447 FAM9CQ8IZT9 166 aa11.77□□□□□ -0.53
CHD3-206ENST00000452447 RDH11Q8TC12 318 aa11.77□□□□□ -0.53
CHD3-206ENST00000452447 C11orf24Q96F05 449 aaPredicted RBP11.77□□□□□ -0.53
CHD3-206ENST00000452447 COL21A1Q96P44 957 aa11.77□□□□□ -0.53
CHD3-206ENST00000452447 ZNF559Q9BR84 538 aa11.77□□□□□ -0.53
CHD3-206ENST00000452447 STMN4Q9H169 189 aaPredicted RBP11.77□□□□□ -0.53
CHD3-206ENST00000452447 ANKRA2Q9H9E1 313 aa11.77□□□□□ -0.53
CHD3-206ENST00000452447 TAS2R9Q9NYW1 312 aa11.77□□□□□ -0.53
CHD3-206ENST00000452447 ITGB1BP2Q9UKP3 347 aa11.77□□□□□ -0.53
CHD3-206ENST00000452447 MAPRE3Q9UPY8 281 aa11.77□□□□□ -0.53
CHD3-206ENST00000452447 CAMK2AQ9UQM7 478 aa11.77□□□□□ -0.53
CHD3-206ENST00000452447 ABCA4P78363 2273 aa11.77□□□□□ -0.53
CHD3-206ENST00000452447 PRAMEF25A6NGN4 478 aa11.76□□□□□ -0.53
CHD3-206ENST00000452447 SNPHO15079 494 aa11.76□□□□□ -0.53
CHD3-206ENST00000452447 PLOD3O60568 738 aa11.76□□□□□ -0.53
CHD3-206ENST00000452447 CBR3O75828 277 aa11.76□□□□□ -0.53
CHD3-206ENST00000452447 EPPINO95925 133 aa11.76□□□□□ -0.53
CHD3-206ENST00000452447 IL2RAP01589 272 aa11.76□□□□□ -0.53
CHD3-206ENST00000452447 CPA3P15088 417 aa11.76□□□□□ -0.53
CHD3-206ENST00000452447 BMP7P18075 431 aa11.76□□□□□ -0.53
CHD3-206ENST00000452447 IL12BP29460 328 aa11.76□□□□□ -0.53
CHD3-206ENST00000452447 PSPHP78330 225 aa11.76□□□□□ -0.53
CHD3-206ENST00000452447 MYBPHQ13203 477 aa11.76□□□□□ -0.53
CHD3-206ENST00000452447 CEBPEQ15744 281 aa11.76□□□□□ -0.53
CHD3-206ENST00000452447 ACSF3Q4G176 576 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms