RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 RBM4BQ9BQ04 359 aaKnown RBP3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 SLC30A2Q9BRI3 323 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 TMEM175Q9BSA9 504 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 TRMOQ9BU70 441 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 GGACTQ9BVM4 153 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 RBM4Q9BWF3 364 aaKnown RBP3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 SF3B5Q9BWJ5 86 aaKnown RBP3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 C1QTNF1Q9BXJ1 281 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 NKX6-2Q9C056 277 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 REXO4Q9GZR2 422 aaKnown RBP3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 TOLLIPQ9H0E2 274 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 THAP2Q9H0W7 228 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 TMPRSS5Q9H3S3 457 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 GSTO2Q9H4Y5 243 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 SLC28A3Q9HAS3 691 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 PLAC1Q9HBJ0 212 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 SEPSECSQ9HD40 501 aaKnown RBP3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 CCNB1IP1Q9NPC3 277 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 MED17Q9NVC6 651 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 NDUFAF4Q9P032 175 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 GHRLQ9UBU3 117 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 OAZ3Q9UMX2 235 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 SLC22A14Q9Y267 594 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 CARHSP1Q9Y2V2 147 aaKnown RBP3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 KLK4Q9Y5K2 254 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 ALG5Q9Y673 324 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 TEX264Q9Y6I9 313 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 TNS3Q68CZ2 1445 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 ITGB4P16144 1822 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 ARFGEF1Q9Y6D6 1849 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 ZFC3H1O60293 1989 aaKnown RBP3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 SCN9AQ15858 1988 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 NRXN3Q9Y4C0 1643 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 MEIKINA0A087WXM9 373 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 GLYATL1P3A0A0U1RQE8 302 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 IQCMA0A1B0GVH7 501 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 C2orf92A0A1B0GVN3 265 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 A0A1W2PQ09 198 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 TCRBV9S1A1TA0A576 114 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 DHRS12A0PJE2 317 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 OR2W5A6NFC9 320 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 GLTPD2A6NH11 291 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 PP2D1A8MPX8 630 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 EFCAB9A8MZ26 197 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 AHRRA9YTQ3 701 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 TRDCB7Z8K6 153 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 F5H0A9 414 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 NPIPB9F8W1W9 429 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 RPL36A-HNRNPH2H7BZ11 118 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 H7C417 338 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 SGK494L7N484 410 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 M0QYV0 167 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 MSH4O15457 936 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 CACNG3O60359 315 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 PLIN3O60664 434 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 HPGDSO60760 199 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 CTNSO60931 367 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 FAM20BO75063 409 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 TIPRLO75663 272 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 ZMPSTE24O75844 475 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 AGFG2O95081 481 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 CLIC3O95833 236 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 PPBPP02775 128 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 TK1P04183 234 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 GUSBP08236 651 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 ATXN1LP0C7T5 689 aaKnown RBP3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 STAG3L1P0CL83 205 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 ERVK-10P10266 1014 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 THRBP10828 461 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 TPH1P17752 444 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 CYP2B6P20813 491 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 UBA1P22314 1058 aaKnown RBP3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 MST1P26927 711 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 CA5AP35218 305 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 MAS1LP35410 378 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 VIPR2P41587 438 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 MATKP42679 507 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 KCNJ3P48549 501 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 SLC1A6P48664 564 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 MRPL19P49406 292 aaKnown RBP3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 CSNK1EP49674 416 aaKnown RBP3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 DIO1P49895 249 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 CSRP3P50461 194 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 ATP4BP51164 291 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 XKP51811 444 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 LIMK2P53671 638 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 RAG2P55895 527 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 ERVK-25P63136 954 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 NHLH2Q02577 135 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 SCN1BQ07699 218 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 FOXM1Q08050 763 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 CD47Q08722 323 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 CAMK2DQ13557 499 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 PEX6Q13608 980 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 BOP1Q14137 746 aaKnown RBP3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 GANABQ14697 944 aaKnown RBP3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 QPRTQ15274 297 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 TAF1AQ15573 450 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 ZNF750Q32MQ0 723 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 SYTL3Q4VX76 610 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms