RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 SHDQ96IW2 340 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 GPR78Q96P69 363 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 TGM7Q96PF1 710 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 CMKLR1Q99788 373 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 IRF2BPLQ9H1B7 796 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 OR51E2Q9H255 320 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 NANSQ9NR45 359 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 ABI3Q9P2A4 366 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 GPR34Q9UPC5 381 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 HS3ST2Q9Y278 367 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 TOGARAM1Q9Y4F4 1720 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 LOC100509620A0A075B734 347 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 FUOMA2VDF0 154 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 PCDH17O14917 1159 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 SCO2O43819 266 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 RLN2P04090 185 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 NUDT7P0C024 238 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 ADORA3P0DMS8 318 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 NR2C1P13056 603 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 CD40LGP29965 261 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 VEGFBP49765 207 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 THOC7Q6I9Y2 204 aaKnown RBP9.86□□□□□ -0.83
CTC1-202ENST00000449476 IGFN1Q86VF2 1251 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 TMEM173Q86WV6 379 aaPredicted RBP9.86□□□□□ -0.83
CTC1-202ENST00000449476 ACOT4Q8N9L9 421 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 INO80EQ8NBZ0 244 aaPredicted RBP9.86□□□□□ -0.83
CTC1-202ENST00000449476 B3GNT7Q8NFL0 401 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 OR52E2Q8NGJ4 325 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 OR2A12Q8NGT7 310 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 OR2L2Q8NH16 312 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 SAMD8Q96LT4 415 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 MACROD1Q9BQ69 325 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 ORAI3Q9BRQ5 295 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 NHSL1Q5SYE7 1610 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 OR2AT4A6NND4 320 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 WASH3PC4AMC7 463 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 PRKYO43930 277 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 CA3P07451 260 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 S1PR1P21453 382 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 C21orf33P30042 268 aaPredicted RBP9.86□□□□□ -0.83
CTC1-202ENST00000449476 PTGER1P34995 402 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 WNT4P56705 351 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 ZNF691Q5VV52 312 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 PNCKQ6P2M8 343 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 GDPGP1Q6ZNW5 385 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 MS4A15Q8N5U1 240 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 METTL25Q8N6Q8 603 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 LMNTD1Q8N9Z9 388 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 OR4K13Q8NH42 304 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 TMEM234Q8WY98 164 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 PEX11GQ96HA9 241 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 ZFYVE21Q9BQ24 234 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 CCDC32Q9BV29 185 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 GLI3P10071 1580 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 ARID1BQ8NFD5 2236 aaPredicted RBP9.86□□□□□ -0.83
CTC1-202ENST00000449476 A0A1W2PQL4 384 aaPredicted RBP9.86□□□□□ -0.83
CTC1-202ENST00000449476 NPC1O15118 1278 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 ITGAMP11215 1152 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 MAP4K2Q12851 820 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 SMN1Q16637 294 aaKnown RBP9.86□□□□□ -0.83
CTC1-202ENST00000449476 SLC25A25Q6KCM7 469 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 SPRED1Q7Z699 444 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 CPOQ8IVL8 374 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 MFSD6LQ8IWD5 586 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 PIAS4Q8N2W9 510 aaPredicted RBP9.86□□□□□ -0.83
CTC1-202ENST00000449476 OR9A2Q8NGT5 310 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 SETD6Q8TBK2 473 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 CREB3L1Q96BA8 519 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 PELOQ9BRX2 385 aaKnown RBP9.86□□□□□ -0.83
CTC1-202ENST00000449476 TP63Q9H3D4 680 aaPredicted RBP9.86□□□□□ -0.83
CTC1-202ENST00000449476 NOP16Q9Y3C1 178 aaKnown RBP9.86□□□□□ -0.83
CTC1-202ENST00000449476 NME7Q9Y5B8 376 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 TMEM14AQ9Y6G1 99 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 SCN9AQ15858 1988 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 A0A1B0GVG6 124 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 A0A1B0GVI7 797 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 ZNF878C9JN71 531 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 I3L521 148 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 CLEC3AO75596 197 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 ITGA5P08648 1049 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 RPL34P49207 117 aaKnown RBP9.86□□□□□ -0.83
CTC1-202ENST00000449476 CDK3Q00526 305 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 POU4F2Q12837 409 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 SNTB2Q13425 540 aaKnown RBP9.86□□□□□ -0.83
CTC1-202ENST00000449476 TUBB3Q13509 450 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 APOFQ13790 326 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 FAM189A2Q15884 450 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 DEFB110Q30KQ9 67 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 PUS10Q3MIT2 529 aaKnown RBP9.86□□□□□ -0.83
CTC1-202ENST00000449476 RNF111Q6ZNA4 994 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 ZNF761Q86XN6 746 aaPredicted RBP9.86□□□□□ -0.83
CTC1-202ENST00000449476 FCAMRQ8WWV6 532 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 AKAP1Q92667 903 aaKnown RBP eCLIP9.86□□□□□ -0.83
CTC1-202ENST00000449476 MROQ9BYG7 248 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 TUBB1Q9H4B7 451 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 ZBTB20Q9HC78 741 aaPredicted RBP9.86□□□□□ -0.83
CTC1-202ENST00000449476 AP1M2Q9Y6Q5 423 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 PIAS3Q9Y6X2 628 aa9.86□□□□□ -0.83
CTC1-202ENST00000449476 KANTRA0A1W2PQU2 76 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 C12orf71A8MTZ7 269 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms